RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 LRRC59Q96AG4 307 aaKnown RBP25.78■■□□□ 1.72
CLDND1-202ENST00000394180 PHACTR3Q96KR7 559 aa25.78■■□□□ 1.72
CLDND1-202ENST00000394180 ATP8B1O43520 1251 aa25.78■■□□□ 1.72
CLDND1-202ENST00000394180 STX6O43752 255 aa25.78■■□□□ 1.72
CLDND1-202ENST00000394180 ZNF75DP51815 510 aa25.78■■□□□ 1.72
CLDND1-202ENST00000394180 KIAA0232Q92628 1395 aa25.77■■□□□ 1.72
CLDND1-202ENST00000394180 HMMRO75330 724 aa25.77■■□□□ 1.72
CLDND1-202ENST00000394180 SLU7O95391 586 aaKnown RBP25.77■■□□□ 1.72
CLDND1-202ENST00000394180 ELP1O95163 1332 aa25.77■■□□□ 1.72
CLDND1-202ENST00000394180 PDE1AP54750 535 aa25.76■■□□□ 1.71
CLDND1-202ENST00000394180 OTUD7AQ8TE49 926 aaPredicted RBP25.76■■□□□ 1.71
CLDND1-202ENST00000394180 RAD51AP2Q09MP3 1159 aa25.76■■□□□ 1.71
CLDND1-202ENST00000394180 ZNF215Q9UL58 517 aaPredicted RBP25.76■■□□□ 1.71
CLDND1-202ENST00000394180 RGPD1P0DJD0 1748 aa25.76■■□□□ 1.71
CLDND1-202ENST00000394180 ERICH4A6NGS2 130 aa25.75■■□□□ 1.71
CLDND1-202ENST00000394180 MAP3K11Q16584 847 aa25.75■■□□□ 1.71
CLDND1-202ENST00000394180 USHBP1Q8N6Y0 703 aa25.75■■□□□ 1.71
CLDND1-202ENST00000394180 TPM4P67936 248 aa25.74■■□□□ 1.71
CLDND1-202ENST00000394180 NFE2L2Q16236 605 aa25.74■■□□□ 1.71
CLDND1-202ENST00000394180 RBM43Q6ZSC3 357 aaKnown RBP25.74■■□□□ 1.71
CLDND1-202ENST00000394180 NAA30Q147X3 362 aaPredicted RBP25.73■■□□□ 1.71
CLDND1-202ENST00000394180 PTPN14Q15678 1187 aa25.73■■□□□ 1.71
CLDND1-202ENST00000394180 MRVI1Q9Y6F6 885 aa25.73■■□□□ 1.71
CLDND1-202ENST00000394180 RGPD5Q99666 1765 aa25.73■■□□□ 1.71
CLDND1-202ENST00000394180 TWISTNBQ3B726 338 aaPredicted RBP25.73■■□□□ 1.71
CLDND1-202ENST00000394180 RASSF4Q9H2L5 321 aa25.73■■□□□ 1.71
CLDND1-202ENST00000394180 V9GYY5 206 aaPredicted RBP25.73■■□□□ 1.71
CLDND1-202ENST00000394180 IGSF1Q8N6C5 1336 aa25.73■■□□□ 1.71
CLDND1-202ENST00000394180 PHLPP1O60346 1717 aa25.73■■□□□ 1.71
CLDND1-202ENST00000394180 TYRO3Q06418 890 aa25.72■■□□□ 1.71
CLDND1-202ENST00000394180 NBPF6Q5VWK0 638 aa25.72■■□□□ 1.71
CLDND1-202ENST00000394180 SARM1Q6SZW1 724 aa25.72■■□□□ 1.71
CLDND1-202ENST00000394180 NBPF4Q96M43 638 aa25.72■■□□□ 1.71
CLDND1-202ENST00000394180 SALL3Q9BXA9 1300 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 SYT1P21579 422 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 MMP14P50281 582 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 LMOD3Q0VAK6 560 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 ANKRD24Q8TF21 1146 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 PALD1Q9ULE6 856 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 PTPRCP08575 1304 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 LRMPQ12912 555 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 DRC7Q8IY82 874 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 L2HGDHQ9H9P8 463 aa25.71■■□□□ 1.71
CLDND1-202ENST00000394180 ABCA3Q99758 1704 aa25.7■■□□□ 1.7
CLDND1-202ENST00000394180 HSPA4P34932 840 aa25.7■■□□□ 1.7
CLDND1-202ENST00000394180 PAXIP1Q6ZW49 1069 aaPredicted RBP25.7■■□□□ 1.7
CLDND1-202ENST00000394180 NUP62CLQ9H1M0 184 aa25.7■■□□□ 1.7
CLDND1-202ENST00000394180 ZNF446Q9NWS9 450 aa25.7■■□□□ 1.7
CLDND1-202ENST00000394180 COL16A1Q07092 1604 aaPredicted RBP25.7■■□□□ 1.7
CLDND1-202ENST00000394180 AOX1Q06278 1338 aa25.7■■□□□ 1.7
CLDND1-202ENST00000394180 PRDM11Q9NQV5 511 aa25.69■■□□□ 1.7
CLDND1-202ENST00000394180 FHOD1Q9Y613 1164 aa25.69■■□□□ 1.7
CLDND1-202ENST00000394180 CPDO75976 1380 aa25.69■■□□□ 1.7
CLDND1-202ENST00000394180 CHMLP26374 656 aa25.69■■□□□ 1.7
CLDND1-202ENST00000394180 TSPYL6Q8N831 410 aa25.69■■□□□ 1.7
CLDND1-202ENST00000394180 RGPD2P0DJD1 1756 aa25.68■■□□□ 1.7
CLDND1-202ENST00000394180 GPS2Q13227 327 aa25.68■■□□□ 1.7
CLDND1-202ENST00000394180 CACTINQ8WUQ7 758 aaKnown RBP25.68■■□□□ 1.7
CLDND1-202ENST00000394180 MRFAP1L1Q96HT8 127 aa25.68■■□□□ 1.7
CLDND1-202ENST00000394180 TRIM5Q9C035 493 aa25.68■■□□□ 1.7
CLDND1-202ENST00000394180 CWC15Q9P013 229 aaKnown RBP25.68■■□□□ 1.7
CLDND1-202ENST00000394180 TNNT3P45378 269 aaPredicted RBP25.68■■□□□ 1.7
CLDND1-202ENST00000394180 ELF2Q15723 593 aa25.68■■□□□ 1.7
CLDND1-202ENST00000394180 CBX8Q9HC52 389 aa25.68■■□□□ 1.7
CLDND1-202ENST00000394180 DDX19AQ9NUU7 478 aaKnown RBP25.68■■□□□ 1.7
CLDND1-202ENST00000394180 ERBB3P21860 1342 aa25.67■■□□□ 1.7
CLDND1-202ENST00000394180 COL18A1P39060 1754 aa25.67■■□□□ 1.7
CLDND1-202ENST00000394180 LRRC8AQ8IWT6 810 aa25.67■■□□□ 1.7
CLDND1-202ENST00000394180 BRMS1Q9HCU9 246 aa25.67■■□□□ 1.7
CLDND1-202ENST00000394180 KDRP35968 1356 aa25.67■■□□□ 1.7
CLDND1-202ENST00000394180 FIBPO43427 364 aa25.67■■□□□ 1.7
CLDND1-202ENST00000394180 DHX8Q14562 1220 aaKnown RBP25.67■■□□□ 1.7
CLDND1-202ENST00000394180 MBIPQ9NS73 344 aa25.67■■□□□ 1.7
CLDND1-202ENST00000394180 CLIP2Q9UDT6 1046 aa25.67■■□□□ 1.7
CLDND1-202ENST00000394180 LIMCH1Q9UPQ0 1083 aa25.67■■□□□ 1.7
CLDND1-202ENST00000394180 NOP2P46087 812 aaKnown RBP25.66■■□□□ 1.7
CLDND1-202ENST00000394180 TTC14Q96N46 770 aa25.66■■□□□ 1.7
CLDND1-202ENST00000394180 SMC3Q9UQE7 1217 aa25.66■■□□□ 1.7
CLDND1-202ENST00000394180 ARGLU1Q9NWB6 273 aaPredicted RBP25.65■■□□□ 1.7
CLDND1-202ENST00000394180 FOXD4L6Q3SYB3 417 aaPredicted RBP25.65■■□□□ 1.7
CLDND1-202ENST00000394180 FOXD4L3Q6VB84 417 aaPredicted RBP25.65■■□□□ 1.7
CLDND1-202ENST00000394180 ANO2Q9NQ90 1003 aa25.65■■□□□ 1.7
CLDND1-202ENST00000394180 STAP2Q9UGK3 403 aa25.65■■□□□ 1.7
CLDND1-202ENST00000394180 RTF1Q92541 710 aaKnown RBP25.64■■□□□ 1.7
CLDND1-202ENST00000394180 UBXN6Q9BZV1 441 aa25.64■■□□□ 1.7
CLDND1-202ENST00000394180 FILIP1Q7Z7B0 1213 aa25.64■■□□□ 1.69
CLDND1-202ENST00000394180 FAM83GA6ND36 823 aa25.63■■□□□ 1.69
CLDND1-202ENST00000394180 ZRANB2O95218 330 aaKnown RBP eCLIP25.63■■□□□ 1.69
CLDND1-202ENST00000394180 PNMA6AP0CW24 399 aaPredicted RBP25.63■■□□□ 1.69
CLDND1-202ENST00000394180 KCNJ6P48051 423 aa25.63■■□□□ 1.69
CLDND1-202ENST00000394180 LUZP1Q86V48 1076 aa25.63■■□□□ 1.69
CLDND1-202ENST00000394180 PSD3Q9NYI0 1048 aa25.63■■□□□ 1.69
CLDND1-202ENST00000394180 NRBP1Q9UHY1 535 aa25.63■■□□□ 1.69
CLDND1-202ENST00000394180 ZSCAN31Q96LW9 406 aaPredicted RBP25.62■■□□□ 1.69
CLDND1-202ENST00000394180 MTMR6Q9Y217 621 aa25.62■■□□□ 1.69
CLDND1-202ENST00000394180 TPM1P09493 284 aa25.61■■□□□ 1.69
CLDND1-202ENST00000394180 PLA2G4AP47712 749 aa25.61■■□□□ 1.69
CLDND1-202ENST00000394180 IQUBQ8NA54 791 aa25.61■■□□□ 1.69
CLDND1-202ENST00000394180 ZFP91Q96JP5 570 aaPredicted RBP25.61■■□□□ 1.69
CLDND1-202ENST00000394180 CSB-PGBD3P0DP91 1061 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms