RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TTC39AQ5SRH9 613 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 RALYLQ86SE5 291 aaKnown RBP12.49□□□□□ -0.41
CALD1-203ENST00000393118 EDC3Q96F86 508 aaKnown RBP12.49□□□□□ -0.41
CALD1-203ENST00000393118 SNX14Q9Y5W7 946 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 LRRFIP1Q32MZ4 808 aaKnown RBP12.49□□□□□ -0.41
CALD1-203ENST00000393118 CADPS2Q86UW7 1296 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 ARHGEF25Q86VW2 580 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 SPC24Q8NBT2 197 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 OSBPL3Q9H4L5 887 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 DIP2BQ9P265 1576 aa12.49□□□□□ -0.41
CALD1-203ENST00000393118 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 TTC41PQ6P2S7 1318 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 PTPRUQ92729 1446 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 GPTP24298 496 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 CCDC158Q5M9N0 1113 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 CNNM1Q9NRU3 951 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 CCDC39Q9UFE4 941 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 USP31Q70CQ4 1352 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 BECN2A8MW95 431 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 TRDNQ13061 729 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 GOLGA6L19H0YKK7 550 aa12.48□□□□□ -0.41
CALD1-203ENST00000393118 GOLGA6L6A8MZA4 724 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 IFIT1P09914 478 aaKnown RBP12.47□□□□□ -0.41
CALD1-203ENST00000393118 ZSCAN22P10073 491 aaPredicted RBP12.47□□□□□ -0.41
CALD1-203ENST00000393118 TFCP2Q12800 502 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 SASS6Q6UVJ0 657 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 SH2B1Q9NRF2 756 aaPredicted RBP12.47□□□□□ -0.41
CALD1-203ENST00000393118 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 SPATA32Q96LK8 384 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 RAD50Q92878 1312 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 USP25Q9UHP3 1055 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 SPATA31D1Q6ZQQ2 1576 aa12.47□□□□□ -0.41
CALD1-203ENST00000393118 HSPA4P34932 840 aa12.46□□□□□ -0.41
CALD1-203ENST00000393118 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
CALD1-203ENST00000393118 DNM1Q05193 864 aaKnown RBP12.46□□□□□ -0.41
CALD1-203ENST00000393118 SLC52A2Q9HAB3 445 aa12.46□□□□□ -0.41
CALD1-203ENST00000393118 SYT1P21579 422 aa12.46□□□□□ -0.41
CALD1-203ENST00000393118 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.41
CALD1-203ENST00000393118 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
CALD1-203ENST00000393118 EAF2Q96CJ1 260 aaPredicted RBP12.46□□□□□ -0.41
CALD1-203ENST00000393118 TRERF1Q96PN7 1200 aa12.46□□□□□ -0.41
CALD1-203ENST00000393118 RBSNQ9H1K0 784 aa12.46□□□□□ -0.41
CALD1-203ENST00000393118 TMOD3Q9NYL9 352 aa12.46□□□□□ -0.41
CALD1-203ENST00000393118 CCT2P78371 535 aaKnown RBP12.46□□□□□ -0.42
CALD1-203ENST00000393118 PTH1RQ03431 593 aa12.46□□□□□ -0.42
CALD1-203ENST00000393118 LRSAM1Q6UWE0 723 aa12.46□□□□□ -0.42
CALD1-203ENST00000393118 ATP10DQ9P241 1426 aa12.46□□□□□ -0.42
CALD1-203ENST00000393118 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
CALD1-203ENST00000393118 KRT32Q14532 448 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
CALD1-203ENST00000393118 ZCRB1Q8TBF4 217 aaKnown RBP12.45□□□□□ -0.42
CALD1-203ENST00000393118 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
CALD1-203ENST00000393118 CWC25Q9NXE8 425 aaPredicted RBP12.45□□□□□ -0.42
CALD1-203ENST00000393118 STAP2Q9UGK3 403 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 GIMAP6Q6P9H5 292 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 NFXL1Q6ZNB6 911 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 CCDC171Q6TFL3 1326 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 CCDC73Q6ZRK6 1079 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 TNMDQ9H2S6 317 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 TECPR2O15040 1411 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 FSD2A1L4K1 749 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 CCDC183Q5T5S1 534 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 FAM173BQ6P4H8 233 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 CCDC129Q6ZRS4 1044 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 TMEM63CQ9P1W3 806 aa12.45□□□□□ -0.42
CALD1-203ENST00000393118 GADD45BO75293 160 aaPredicted RBP12.44□□□□□ -0.42
CALD1-203ENST00000393118 HAND2P61296 217 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 TIMM10P62072 90 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 GCKRQ14397 625 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 OFD1O75665 1012 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 A1BGP04217 495 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 BRF1Q92994 677 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 DBNDD2Q9BQY9 259 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
CALD1-203ENST00000393118 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
CALD1-203ENST00000393118 CCDC192P0DO97 292 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 RAB11FIP4Q86YS3 637 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 NEK1Q96PY6 1258 aa12.44□□□□□ -0.42
CALD1-203ENST00000393118 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
CALD1-203ENST00000393118 TLR7Q9NYK1 1049 aaKnown RBP12.44□□□□□ -0.42
CALD1-203ENST00000393118 F13A1P00488 732 aa12.43□□□□□ -0.42
CALD1-203ENST00000393118 METTL24Q5JXM2 366 aa12.43□□□□□ -0.42
CALD1-203ENST00000393118 SDF4Q9BRK5 362 aa12.43□□□□□ -0.42
CALD1-203ENST00000393118 TRIM5Q9C035 493 aa12.43□□□□□ -0.42
CALD1-203ENST00000393118 NUP62CLQ9H1M0 184 aa12.43□□□□□ -0.42
CALD1-203ENST00000393118 AOX1Q06278 1338 aa12.43□□□□□ -0.42
CALD1-203ENST00000393118 ERICH4A6NGS2 130 aa12.43□□□□□ -0.42
CALD1-203ENST00000393118 NEURL1BA8MQ27 555 aa12.43□□□□□ -0.42
CALD1-203ENST00000393118 KDRP35968 1356 aa12.43□□□□□ -0.42
CALD1-203ENST00000393118 BRD1O95696 1058 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 ME1P48163 572 aa12.42□□□□□ -0.42
CALD1-203ENST00000393118 CPLX2Q6PUV4 134 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms