RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 CTCFLQ8NI51 663 aaPredicted RBP19.94■□□□□ 0.78
SGCB-201ENST00000381431 NMIQ13287 307 aaPredicted RBP19.93■□□□□ 0.78
SGCB-201ENST00000381431 NFATC2IPQ8NCF5 419 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 MKNK2Q9HBH9 465 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 CEP131Q9UPN4 1083 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 FLT4P35916 1363 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 KLF18A0A0U1RQI7 1052 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 IQCA1Q86XH1 822 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 CABLES1Q8TDN4 633 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 DNMT1P26358 1616 aaKnown RBP19.93■□□□□ 0.78
SGCB-201ENST00000381431 IL13P35225 146 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 ODF2Q5BJF6 829 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 TMEM67Q5HYA8 995 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 ADAMTS12P58397 1594 aa19.93■□□□□ 0.78
SGCB-201ENST00000381431 F13A1P00488 732 aa19.92■□□□□ 0.78
SGCB-201ENST00000381431 TMC6Q7Z403 805 aa19.92■□□□□ 0.78
SGCB-201ENST00000381431 PRM3Q9NNZ6 103 aa19.92■□□□□ 0.78
SGCB-201ENST00000381431 AKAP4Q5JQC9 854 aa19.92■□□□□ 0.78
SGCB-201ENST00000381431 TMX1Q9H3N1 280 aa19.92■□□□□ 0.78
SGCB-201ENST00000381431 SLC5A1P13866 664 aa19.92■□□□□ 0.78
SGCB-201ENST00000381431 CHST3Q7LGC8 479 aa19.92■□□□□ 0.78
SGCB-201ENST00000381431 SOS1Q07889 1333 aaPredicted RBP19.92■□□□□ 0.78
SGCB-201ENST00000381431 CDR1P51861 262 aa19.92■□□□□ 0.78
SGCB-201ENST00000381431 CCDC181Q5TID7 509 aa19.91■□□□□ 0.78
SGCB-201ENST00000381431 RBM25P49756 843 aaKnown RBP19.91■□□□□ 0.78
SGCB-201ENST00000381431 WDR7Q9Y4E6 1490 aa19.91■□□□□ 0.78
SGCB-201ENST00000381431 HSP90AB3PQ58FF7 597 aa19.91■□□□□ 0.78
SGCB-201ENST00000381431 Q6ZUG5 572 aa19.91■□□□□ 0.78
SGCB-201ENST00000381431 IQSEC3Q9UPP2 1182 aaPredicted RBP19.91■□□□□ 0.78
SGCB-201ENST00000381431 STX1AQ16623 288 aa19.9■□□□□ 0.78
SGCB-201ENST00000381431 BMP2KQ9NSY1 1161 aaPredicted RBP19.9■□□□□ 0.78
SGCB-201ENST00000381431 MSH6P52701 1360 aa19.9■□□□□ 0.78
SGCB-201ENST00000381431 ERICH4A6NGS2 130 aa19.9■□□□□ 0.78
SGCB-201ENST00000381431 MCM5P33992 734 aa19.9■□□□□ 0.78
SGCB-201ENST00000381431 SSRP1Q08945 709 aaKnown RBP19.9■□□□□ 0.78
SGCB-201ENST00000381431 HSP90AA4PQ58FG1 418 aa19.9■□□□□ 0.78
SGCB-201ENST00000381431 CCDC186Q7Z3E2 898 aa19.9■□□□□ 0.78
SGCB-201ENST00000381431 NCOA7Q8NI08 942 aa19.9■□□□□ 0.78
SGCB-201ENST00000381431 H0YHG0 523 aa19.9■□□□□ 0.78
SGCB-201ENST00000381431 METAP2P50579 478 aaKnown RBP eCLIP19.9■□□□□ 0.78
SGCB-201ENST00000381431 ANO6Q4KMQ2 910 aa19.9■□□□□ 0.78
SGCB-201ENST00000381431 FAM193AP78312 1265 aa19.89■□□□□ 0.78
SGCB-201ENST00000381431 UVSSAQ2YD98 709 aa19.89■□□□□ 0.78
SGCB-201ENST00000381431 SLC26A6Q9BXS9 759 aa19.89■□□□□ 0.78
SGCB-201ENST00000381431 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.77
SGCB-201ENST00000381431 MAGI3Q5TCQ9 1506 aa19.89■□□□□ 0.77
SGCB-201ENST00000381431 ERLIN1O75477 346 aa19.89■□□□□ 0.77
SGCB-201ENST00000381431 LEKR1Q6ZMV7 388 aa19.89■□□□□ 0.77
SGCB-201ENST00000381431 ZNF652Q9Y2D9 606 aa19.89■□□□□ 0.77
SGCB-201ENST00000381431 EIF2AK4Q9P2K8 1649 aaKnown RBP19.89■□□□□ 0.77
SGCB-201ENST00000381431 EXOC5O00471 708 aa19.89■□□□□ 0.77
SGCB-201ENST00000381431 SLC4A8Q2Y0W8 1093 aa19.89■□□□□ 0.77
SGCB-201ENST00000381431 MCMDC2Q4G0Z9 681 aa19.89■□□□□ 0.77
SGCB-201ENST00000381431 KIF2AO00139 706 aaPredicted RBP19.88■□□□□ 0.77
SGCB-201ENST00000381431 KCNA6P17658 529 aa19.88■□□□□ 0.77
SGCB-201ENST00000381431 KIAA1328Q86T90 577 aa19.88■□□□□ 0.77
SGCB-201ENST00000381431 DZIP1Q86YF9 867 aaKnown RBP19.88■□□□□ 0.77
SGCB-201ENST00000381431 DNAJC25Q9H1X3 360 aa19.88■□□□□ 0.77
SGCB-201ENST00000381431 ZSCAN16Q9H4T2 348 aaPredicted RBP19.88■□□□□ 0.77
SGCB-201ENST00000381431 CWC15Q9P013 229 aaKnown RBP19.88■□□□□ 0.77
SGCB-201ENST00000381431 CHL1O00533 1208 aa19.88■□□□□ 0.77
SGCB-201ENST00000381431 KIF4BQ2VIQ3 1234 aa19.88■□□□□ 0.77
SGCB-201ENST00000381431 TMCO3Q6UWJ1 677 aa19.88■□□□□ 0.77
SGCB-201ENST00000381431 SYT1P21579 422 aa19.88■□□□□ 0.77
SGCB-201ENST00000381431 ZMYM4Q5VZL5 1548 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 ADGRL2O95490 1459 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 FAM200AQ8TCP9 573 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 RNF41Q9H4P4 317 aaPredicted RBP19.87■□□□□ 0.77
SGCB-201ENST00000381431 CREB3L3Q68CJ9 461 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 CCDC102AQ96A19 550 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 ABCC1P33527 1531 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 ZSCAN12O43309 604 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 GCP02774 474 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 ANKIB1Q9P2G1 1089 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 ZKSCAN5Q9Y2L8 839 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 PTPRTO14522 1441 aa19.87■□□□□ 0.77
SGCB-201ENST00000381431 NLRP5P59047 1200 aa19.86■□□□□ 0.77
SGCB-201ENST00000381431 PKNOX2Q96KN3 472 aa19.86■□□□□ 0.77
SGCB-201ENST00000381431 LUC7LQ9NQ29 371 aaKnown RBP19.86■□□□□ 0.77
SGCB-201ENST00000381431 ABCC10Q5T3U5 1492 aa19.86■□□□□ 0.77
SGCB-201ENST00000381431 PNMA6EA0A0J9YXQ4 647 aa19.86■□□□□ 0.77
SGCB-201ENST00000381431 NOLC1Q14978 699 aaKnown RBP eCLIP19.86■□□□□ 0.77
SGCB-201ENST00000381431 ATP2B3Q16720 1220 aa19.86■□□□□ 0.77
SGCB-201ENST00000381431 CENPHQ9H3R5 247 aa19.86■□□□□ 0.77
SGCB-201ENST00000381431 KLHDC4Q8TBB5 520 aa19.86■□□□□ 0.77
SGCB-201ENST00000381431 PDCL3Q9H2J4 239 aa19.86■□□□□ 0.77
SGCB-201ENST00000381431 MARCKSP29966 332 aaPredicted RBP19.86■□□□□ 0.77
SGCB-201ENST00000381431 HOXC9P31274 260 aa19.86■□□□□ 0.77
SGCB-201ENST00000381431 CCDC102BQ68D86 513 aa19.85■□□□□ 0.77
SGCB-201ENST00000381431 FAM173BQ6P4H8 233 aa19.85■□□□□ 0.77
SGCB-201ENST00000381431 MFSD6Q6ZSS7 791 aa19.85■□□□□ 0.77
SGCB-201ENST00000381431 TSPYL1Q9H0U9 437 aa19.85■□□□□ 0.77
SGCB-201ENST00000381431 ZPR1O75312 459 aa19.84■□□□□ 0.77
SGCB-201ENST00000381431 SYCP1Q15431 976 aa19.84■□□□□ 0.77
SGCB-201ENST00000381431 CATIPQ7Z7H3 387 aa19.84■□□□□ 0.77
SGCB-201ENST00000381431 CADPS2Q86UW7 1296 aa19.84■□□□□ 0.77
SGCB-201ENST00000381431 TTC41PQ6P2S7 1318 aa19.84■□□□□ 0.77
SGCB-201ENST00000381431 BLMP54132 1417 aaPredicted RBP19.84■□□□□ 0.77
SGCB-201ENST00000381431 SLC9C2Q5TAH2 1124 aa19.84■□□□□ 0.77
SGCB-201ENST00000381431 ZNF444Q8N0Y2 327 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms