RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 ITGB4P16144 1822 aa10.01□□□□□ -0.81
FAM49A-201ENST00000381323 FKBP5Q13451 457 aaPredicted RBP10.01□□□□□ -0.81
FAM49A-201ENST00000381323 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
FAM49A-201ENST00000381323 MYD88Q99836 296 aa10.01□□□□□ -0.81
FAM49A-201ENST00000381323 ZC3H12CQ9C0D7 883 aaKnown RBP10□□□□□ -0.81
FAM49A-201ENST00000381323 ERICH6Q7L0X2 663 aa10□□□□□ -0.81
FAM49A-201ENST00000381323 PNMA8AQ86V59 439 aaPredicted RBP10□□□□□ -0.81
FAM49A-201ENST00000381323 MYH16Q9H6N6 1097 aa10□□□□□ -0.81
FAM49A-201ENST00000381323 PAPPAQ13219 1627 aa10□□□□□ -0.81
FAM49A-201ENST00000381323 H7C1D1 291 aa10□□□□□ -0.81
FAM49A-201ENST00000381323 SUSD4Q5VX71 490 aa10□□□□□ -0.81
FAM49A-201ENST00000381323 LY75O60449 1722 aa9.99□□□□□ -0.81
FAM49A-201ENST00000381323 BBOX1O75936 387 aa9.99□□□□□ -0.81
FAM49A-201ENST00000381323 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
FAM49A-201ENST00000381323 TCIRG1Q13488 830 aa9.99□□□□□ -0.81
FAM49A-201ENST00000381323 IFT57Q9NWB7 429 aa9.99□□□□□ -0.81
FAM49A-201ENST00000381323 RIMBP2O15034 1052 aa9.99□□□□□ -0.81
FAM49A-201ENST00000381323 TNIP1Q15025 636 aa9.99□□□□□ -0.81
FAM49A-201ENST00000381323 CCDC152Q4G0S7 254 aa9.99□□□□□ -0.81
FAM49A-201ENST00000381323 PLBD2Q8NHP8 589 aa9.99□□□□□ -0.81
FAM49A-201ENST00000381323 RBM26Q5T8P6 1007 aaKnown RBP9.98□□□□□ -0.81
FAM49A-201ENST00000381323 CHADLQ6NUI6 762 aa9.98□□□□□ -0.81
FAM49A-201ENST00000381323 IRS4O14654 1257 aaPredicted RBP9.98□□□□□ -0.81
FAM49A-201ENST00000381323 KIF3CO14782 793 aa9.98□□□□□ -0.81
FAM49A-201ENST00000381323 MPHOSPH8Q99549 860 aa9.98□□□□□ -0.81
FAM49A-201ENST00000381323 KCNA3P22001 575 aa9.98□□□□□ -0.81
FAM49A-201ENST00000381323 SLC4A10Q6U841 1118 aa9.98□□□□□ -0.81
FAM49A-201ENST00000381323 FAM89AQ96GI7 184 aa9.98□□□□□ -0.81
FAM49A-201ENST00000381323 CDC5LQ99459 802 aaKnown RBP9.98□□□□□ -0.81
FAM49A-201ENST00000381323 CWC25Q9NXE8 425 aaPredicted RBP9.98□□□□□ -0.81
FAM49A-201ENST00000381323 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
FAM49A-201ENST00000381323 FRAT2O75474 233 aaPredicted RBP9.97□□□□□ -0.81
FAM49A-201ENST00000381323 CAPN15O75808 1086 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 HOXB7P09629 217 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 KRT24Q2M2I5 525 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 TMC4Q7Z404 712 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 MKRN1Q9UHC7 482 aaKnown RBP9.97□□□□□ -0.81
FAM49A-201ENST00000381323 RGL2O15211 777 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 PLEKHF1Q96S99 279 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 NFKBIEO00221 500 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 EPHX2P34913 555 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 TWISTNBQ3B726 338 aaPredicted RBP9.97□□□□□ -0.81
FAM49A-201ENST00000381323 MBIPQ9NS73 344 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 CIAPIN1Q6FI81 312 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 ANKRD18AQ8IVF6 992 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 CRAMP1Q96RY5 1269 aa9.97□□□□□ -0.81
FAM49A-201ENST00000381323 C9orf78Q9NZ63 289 aaPredicted RBP9.97□□□□□ -0.81
FAM49A-201ENST00000381323 TTLL12Q14166 644 aaPredicted RBP9.96□□□□□ -0.81
FAM49A-201ENST00000381323 CHD4Q14839 1912 aa9.96□□□□□ -0.81
FAM49A-201ENST00000381323 TOGARAM1Q9Y4F4 1720 aa9.96□□□□□ -0.81
FAM49A-201ENST00000381323 CHL1O00533 1208 aa9.96□□□□□ -0.82
FAM49A-201ENST00000381323 SLC4A2P04920 1241 aa9.96□□□□□ -0.82
FAM49A-201ENST00000381323 WASHC4Q2M389 1173 aa9.96□□□□□ -0.82
FAM49A-201ENST00000381323 RNF123Q5XPI4 1314 aa9.96□□□□□ -0.82
FAM49A-201ENST00000381323 MRC1P22897 1456 aa9.95□□□□□ -0.82
FAM49A-201ENST00000381323 KCPQ6ZWJ8 1503 aa9.95□□□□□ -0.82
FAM49A-201ENST00000381323 RAD17O75943 681 aa9.95□□□□□ -0.82
FAM49A-201ENST00000381323 PROSER3Q2NL68 480 aa9.95□□□□□ -0.82
FAM49A-201ENST00000381323 NLRP10Q86W26 655 aa9.95□□□□□ -0.82
FAM49A-201ENST00000381323 LDHDQ86WU2 507 aa9.95□□□□□ -0.82
FAM49A-201ENST00000381323 TSR2Q969E8 191 aaKnown RBP9.95□□□□□ -0.82
FAM49A-201ENST00000381323 AOC3Q16853 763 aa9.95□□□□□ -0.82
FAM49A-201ENST00000381323 C4AP0C0L4 1744 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 UFL1O94874 794 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 GRAPQ13588 217 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 GRAPLQ8TC17 118 aaPredicted RBP9.94□□□□□ -0.82
FAM49A-201ENST00000381323 SHANK3Q9BYB0 1731 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 RPS8P62241 208 aaKnown RBP9.94□□□□□ -0.82
FAM49A-201ENST00000381323 HTRA3P83110 453 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 OLFM4Q6UX06 510 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 OGFOD1Q8N543 542 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 GGA1Q9UJY5 639 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 MAP3K2Q9Y2U5 619 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 VPS37DQ86XT2 251 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 COL3A1P02461 1466 aaPredicted RBP9.94□□□□□ -0.82
FAM49A-201ENST00000381323 ZNF34Q8IZ26 560 aa9.94□□□□□ -0.82
FAM49A-201ENST00000381323 JARID2Q92833 1246 aaPredicted RBP9.94□□□□□ -0.82
FAM49A-201ENST00000381323 MAP1SQ66K74 1059 aaPredicted RBP9.93□□□□□ -0.82
FAM49A-201ENST00000381323 GPC2Q8N158 579 aa9.93□□□□□ -0.82
FAM49A-201ENST00000381323 ZNRF3Q9ULT6 936 aa9.93□□□□□ -0.82
FAM49A-201ENST00000381323 PLIN1O60240 522 aa9.93□□□□□ -0.82
FAM49A-201ENST00000381323 DCPSQ96C86 337 aaKnown RBP9.93□□□□□ -0.82
FAM49A-201ENST00000381323 ATP6V0A2Q9Y487 856 aa9.93□□□□□ -0.82
FAM49A-201ENST00000381323 UBR3Q6ZT12 1888 aa9.93□□□□□ -0.82
FAM49A-201ENST00000381323 ECE1P42892 770 aa9.93□□□□□ -0.82
FAM49A-201ENST00000381323 PI4KAP2A4QPH2 592 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 PI4KAP1Q8N8J0 262 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 NF2P35240 595 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 SP8Q8IXZ3 490 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 CCDC191Q8NCU4 936 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 NTSR2O95665 410 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 CNTROBQ8N137 903 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 PSMD1Q99460 953 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 TAF1DQ9H5J8 278 aaPredicted RBP9.92□□□□□ -0.82
FAM49A-201ENST00000381323 CNNM1Q9NRU3 951 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 LTBP3Q9NS15 1303 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 PDE8AO60658 829 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 SULF1Q8IWU6 871 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 TNS4Q8IZW8 715 aa9.92□□□□□ -0.82
FAM49A-201ENST00000381323 DOK7Q18PE1 504 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms