RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 TM4SF1P30408 202 aa11.97□□□□□ -0.49
HMGN1-202ENST00000380747 NFIXQ14938 502 aa11.97□□□□□ -0.49
HMGN1-202ENST00000380747 C9orf131Q5VYM1 1079 aa11.97□□□□□ -0.49
HMGN1-202ENST00000380747 C16orf71Q8IYS4 520 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-202ENST00000380747 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
HMGN1-202ENST00000380747 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
HMGN1-202ENST00000380747 ZC3H4Q9UPT8 1303 aaKnown RBP11.96□□□□□ -0.49
HMGN1-202ENST00000380747 POLRMTO00411 1230 aaKnown RBP11.96□□□□□ -0.49
HMGN1-202ENST00000380747 ELL2O00472 640 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-202ENST00000380747 MAP3K13O43283 966 aa11.96□□□□□ -0.49
HMGN1-202ENST00000380747 DUSP27Q5VZP5 1158 aa11.96□□□□□ -0.49
HMGN1-202ENST00000380747 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
HMGN1-202ENST00000380747 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
HMGN1-202ENST00000380747 KIF12Q96FN5 646 aa11.96□□□□□ -0.49
HMGN1-202ENST00000380747 PIM2Q9P1W9 311 aa11.96□□□□□ -0.49
HMGN1-202ENST00000380747 IL16Q14005 1332 aa11.95□□□□□ -0.5
HMGN1-202ENST00000380747 ANXA1P04083 346 aa11.95□□□□□ -0.5
HMGN1-202ENST00000380747 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-202ENST00000380747 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
HMGN1-202ENST00000380747 KIF6Q6ZMV9 814 aa11.95□□□□□ -0.5
HMGN1-202ENST00000380747 ZNF652Q9Y2D9 606 aa11.95□□□□□ -0.5
HMGN1-202ENST00000380747 SERPINB2P05120 415 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 HOXB7P09629 217 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 PSEN1P49768 467 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 PDIA6Q15084 440 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 DALRD3Q5D0E6 543 aaKnown RBP11.94□□□□□ -0.5
HMGN1-202ENST00000380747 TTLL7Q6ZT98 887 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 C8orf58Q8NAV2 365 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 ZBTB3Q9H5J0 574 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 SCN7AQ01118 1682 aa11.94□□□□□ -0.5
HMGN1-202ENST00000380747 NPHP1O15259 732 aa11.93□□□□□ -0.5
HMGN1-202ENST00000380747 AIMP1Q12904 312 aaKnown RBP11.93□□□□□ -0.5
HMGN1-202ENST00000380747 SETDB2Q96T68 719 aa11.93□□□□□ -0.5
HMGN1-202ENST00000380747 DDX21Q9NR30 783 aaKnown RBP eCLIP11.93□□□□□ -0.5
HMGN1-202ENST00000380747 CHPF2Q9P2E5 772 aa11.93□□□□□ -0.5
HMGN1-202ENST00000380747 TNRC6CQ9HCJ0 1690 aaKnown RBP11.93□□□□□ -0.5
HMGN1-202ENST00000380747 MAP3K15Q6ZN16 1313 aa11.92□□□□□ -0.5
HMGN1-202ENST00000380747 PRELPP51888 382 aa11.92□□□□□ -0.5
HMGN1-202ENST00000380747 HTRA3P83110 453 aa11.92□□□□□ -0.5
HMGN1-202ENST00000380747 HLFQ16534 295 aa11.92□□□□□ -0.5
HMGN1-202ENST00000380747 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
HMGN1-202ENST00000380747 SMC1BQ8NDV3 1235 aa11.92□□□□□ -0.5
HMGN1-202ENST00000380747 RNF181Q9P0P0 153 aa11.92□□□□□ -0.5
HMGN1-202ENST00000380747 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-202ENST00000380747 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
HMGN1-202ENST00000380747 FANCIQ9NVI1 1328 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 FAM177BA6PVY3 158 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 ERVV-1B6SEH8 477 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 GOLGA2Q08379 1002 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 COPS6Q7L5N1 327 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 LRP10Q7Z4F1 713 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 TSPYL6Q8N831 410 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 XAGE3Q8WTP9 111 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 PHF12Q96QT6 1004 aa11.91□□□□□ -0.5
HMGN1-202ENST00000380747 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.5
HMGN1-202ENST00000380747 BCORQ6W2J9 1755 aa11.9□□□□□ -0.5
HMGN1-202ENST00000380747 TWISTNBQ3B726 338 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-202ENST00000380747 CCDC30Q5VVM6 783 aa11.9□□□□□ -0.5
HMGN1-202ENST00000380747 CCDC24Q8N4L8 307 aa11.9□□□□□ -0.5
HMGN1-202ENST00000380747 MYH16Q9H6N6 1097 aa11.9□□□□□ -0.5
HMGN1-202ENST00000380747 RRAGCQ9HB90 399 aa11.9□□□□□ -0.5
HMGN1-202ENST00000380747 TCERG1O14776 1098 aaKnown RBP11.89□□□□□ -0.51
HMGN1-202ENST00000380747 GPTP24298 496 aa11.89□□□□□ -0.51
HMGN1-202ENST00000380747 ST5P78524 1137 aa11.89□□□□□ -0.51
HMGN1-202ENST00000380747 EXOSC9Q06265 439 aaKnown RBP11.89□□□□□ -0.51
HMGN1-202ENST00000380747 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
HMGN1-202ENST00000380747 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-202ENST00000380747 CNBD1Q8NA66 436 aa11.89□□□□□ -0.51
HMGN1-202ENST00000380747 CHMP4AQ9BY43 222 aa11.89□□□□□ -0.51
HMGN1-202ENST00000380747 HYPKQ9NX55 129 aa11.89□□□□□ -0.51
HMGN1-202ENST00000380747 ZNF521Q96K83 1311 aa11.88□□□□□ -0.51
HMGN1-202ENST00000380747 GTF2E1P29083 439 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-202ENST00000380747 CHRNA5P30532 468 aa11.88□□□□□ -0.51
HMGN1-202ENST00000380747 GIGYF2Q6Y7W6 1299 aaKnown RBP11.88□□□□□ -0.51
HMGN1-202ENST00000380747 SBF1O95248 1867 aa11.88□□□□□ -0.51
HMGN1-202ENST00000380747 GLTPD2A6NH11 291 aa11.87□□□□□ -0.51
HMGN1-202ENST00000380747 VEGFAP15692 232 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-202ENST00000380747 LMNB1P20700 586 aa11.87□□□□□ -0.51
HMGN1-202ENST00000380747 TPTE2Q6XPS3 522 aa11.87□□□□□ -0.51
HMGN1-202ENST00000380747 C2CD5Q86YS7 1000 aa11.87□□□□□ -0.51
HMGN1-202ENST00000380747 STK31Q9BXU1 1019 aa11.87□□□□□ -0.51
HMGN1-202ENST00000380747 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
HMGN1-202ENST00000380747 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
HMGN1-202ENST00000380747 PDE6BP35913 854 aa11.86□□□□□ -0.51
HMGN1-202ENST00000380747 HSP90AB3PQ58FF7 597 aa11.86□□□□□ -0.51
HMGN1-202ENST00000380747 SUSD4Q5VX71 490 aa11.86□□□□□ -0.51
HMGN1-202ENST00000380747 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
HMGN1-202ENST00000380747 ZNF34Q8IZ26 560 aa11.86□□□□□ -0.51
HMGN1-202ENST00000380747 PLBD2Q8NHP8 589 aa11.86□□□□□ -0.51
HMGN1-202ENST00000380747 BRIP1Q9BX63 1249 aa11.86□□□□□ -0.51
HMGN1-202ENST00000380747 RYDENQ9NUL5 291 aaKnown RBP11.86□□□□□ -0.51
HMGN1-202ENST00000380747 AFDNP55196 1824 aaKnown RBP11.86□□□□□ -0.51
HMGN1-202ENST00000380747 NRXN2Q9P2S2 1712 aa11.86□□□□□ -0.51
HMGN1-202ENST00000380747 E9PSI1 815 aa11.85□□□□□ -0.51
HMGN1-202ENST00000380747 H0YIN7 160 aa11.85□□□□□ -0.51
HMGN1-202ENST00000380747 VAMP4O75379 141 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms