RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 STRCQ7RTU9 1775 aa19.81■□□□□ 0.76
PCDHA1-201ENST00000378133 RNMTO43148 476 aaKnown RBP19.81■□□□□ 0.76
PCDHA1-201ENST00000378133 PRPF40BQ6NWY9 871 aaKnown RBP19.81■□□□□ 0.76
PCDHA1-201ENST00000378133 RUFY2Q8WXA3 655 aa19.81■□□□□ 0.76
PCDHA1-201ENST00000378133 GIGYF1O75420 1035 aaPredicted RBP19.81■□□□□ 0.76
PCDHA1-201ENST00000378133 IFIT2P09913 472 aaKnown RBP19.81■□□□□ 0.76
PCDHA1-201ENST00000378133 KCNH5Q8NCM2 988 aa19.81■□□□□ 0.76
PCDHA1-201ENST00000378133 HYPKQ9NX55 129 aa19.81■□□□□ 0.76
PCDHA1-201ENST00000378133 RGPD2P0DJD1 1756 aa19.8■□□□□ 0.76
PCDHA1-201ENST00000378133 KDM3BQ7LBC6 1761 aa19.8■□□□□ 0.76
PCDHA1-201ENST00000378133 CHAF1AQ13111 956 aaPredicted RBP19.8■□□□□ 0.76
PCDHA1-201ENST00000378133 C1orf141Q5JVX7 400 aa19.8■□□□□ 0.76
PCDHA1-201ENST00000378133 PDCL2Q8N4E4 241 aa19.8■□□□□ 0.76
PCDHA1-201ENST00000378133 DDX54Q8TDD1 881 aaKnown RBP19.8■□□□□ 0.76
PCDHA1-201ENST00000378133 KSR2Q6VAB6 950 aa19.8■□□□□ 0.76
PCDHA1-201ENST00000378133 CCDC83Q8IWF9 413 aa19.8■□□□□ 0.76
PCDHA1-201ENST00000378133 JAKMIP1Q96N16 626 aaKnown RBP19.8■□□□□ 0.76
PCDHA1-201ENST00000378133 KIAA1524Q8TCG1 905 aa19.79■□□□□ 0.76
PCDHA1-201ENST00000378133 NFAT5O94916 1531 aa19.79■□□□□ 0.76
PCDHA1-201ENST00000378133 ALDH1L1O75891 902 aa19.79■□□□□ 0.76
PCDHA1-201ENST00000378133 AACSQ86V21 672 aa19.79■□□□□ 0.76
PCDHA1-201ENST00000378133 PROSER2Q86WR7 435 aaPredicted RBP19.79■□□□□ 0.76
PCDHA1-201ENST00000378133 PDRG1Q9NUG6 133 aa19.79■□□□□ 0.76
PCDHA1-201ENST00000378133 F13A1P00488 732 aa19.78■□□□□ 0.76
PCDHA1-201ENST00000378133 AMOTQ4VCS5 1084 aa19.78■□□□□ 0.76
PCDHA1-201ENST00000378133 GIMAP6Q6P9H5 292 aa19.78■□□□□ 0.76
PCDHA1-201ENST00000378133 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.78■□□□□ 0.76
PCDHA1-201ENST00000378133 SPDYE4A6NLX3 237 aa19.77■□□□□ 0.76
PCDHA1-201ENST00000378133 RIOK3O14730 519 aaKnown RBP19.77■□□□□ 0.76
PCDHA1-201ENST00000378133 FIBPO43427 364 aa19.77■□□□□ 0.76
PCDHA1-201ENST00000378133 GPATCH3Q96I76 525 aa19.77■□□□□ 0.76
PCDHA1-201ENST00000378133 GJB2P29033 226 aa19.77■□□□□ 0.76
PCDHA1-201ENST00000378133 AIMP1Q12904 312 aaKnown RBP19.77■□□□□ 0.76
PCDHA1-201ENST00000378133 PYCARDQ9ULZ3 195 aa19.77■□□□□ 0.76
PCDHA1-201ENST00000378133 GCP02774 474 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 TPM3P06753 285 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 ERC1Q8IUD2 1116 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 EVI5LQ96CN4 794 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 KCNF1Q9H3M0 494 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 AP5Z1O43299 807 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 VPS53Q5VIR6 699 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 LMOD2Q6P5Q4 547 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 SPC24Q8NBT2 197 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 SUCLG2Q96I99 432 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 FUCA2Q9BTY2 467 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 ZSWIM6Q9HCJ5 1215 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 CYP46A1Q9Y6A2 500 aa19.76■□□□□ 0.75
PCDHA1-201ENST00000378133 NECTIN1Q15223 517 aa19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 CCDC8Q9H0W5 538 aaPredicted RBP19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 ATP6V1DQ9Y5K8 247 aa19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 SASH1O94885 1247 aa19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 KIF20AO95235 890 aa19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 KAZALD1Q96I82 304 aa19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 FAM227BQ96M60 508 aa19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 PXDNQ92626 1479 aa19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 GRM8O00222 908 aa19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 EAF2Q96CJ1 260 aaPredicted RBP19.75■□□□□ 0.75
PCDHA1-201ENST00000378133 BICC1Q9H694 974 aaKnown RBP19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 CRYBG1Q9Y4K1 1723 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 GOLGA6L6A8MZA4 724 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 KCNJ4P48050 445 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 DNM1Q05193 864 aaKnown RBP19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 G3BP1Q13283 466 aaKnown RBP eCLIP19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 ARHGEF25Q86VW2 580 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 NECAB1Q8N987 351 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 LINS1Q8NG48 757 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 ANKRD24Q8TF21 1146 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 TM6SF1Q9BZW5 370 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 HDAC5Q9UQL6 1122 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 MTMR6Q9Y217 621 aa19.74■□□□□ 0.75
PCDHA1-201ENST00000378133 LMO7Q8WWI1 1683 aa19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 CCDC171Q6TFL3 1326 aa19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 ZKSCAN1P17029 563 aaPredicted RBP19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 ME3Q16798 604 aa19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 TAF7LQ5H9L4 462 aa19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 RBM8AQ9Y5S9 174 aaKnown RBP19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 ANKRD7Q92527 254 aa19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 KCNB2Q92953 911 aa19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 ZSCAN31Q96LW9 406 aaPredicted RBP19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 ORAI2Q96SN7 254 aa19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 SIL1Q9H173 461 aa19.73■□□□□ 0.75
PCDHA1-201ENST00000378133 U2AF2P26368 475 aaKnown RBP eCLIP19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 ST3GAL1Q11201 340 aa19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 NMIQ13287 307 aaPredicted RBP19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 COL9A3Q14050 684 aaPredicted RBP19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 CREB3L3Q68CJ9 461 aa19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 TMEM94Q12767 1356 aa19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 HEG1Q9ULI3 1381 aa19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 BOLA2Q9H3K6 86 aa19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 SH2B1Q9NRF2 756 aaPredicted RBP19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 TLR7Q9NYK1 1049 aaKnown RBP19.72■□□□□ 0.75
PCDHA1-201ENST00000378133 VPS37CA5D8V6 355 aaPredicted RBP19.71■□□□□ 0.75
PCDHA1-201ENST00000378133 KLHL34Q8N239 644 aa19.71■□□□□ 0.75
PCDHA1-201ENST00000378133 AXIN2Q9Y2T1 843 aa19.71■□□□□ 0.75
PCDHA1-201ENST00000378133 KLHDC4Q8TBB5 520 aa19.71■□□□□ 0.75
PCDHA1-201ENST00000378133 MAP4K1Q92918 833 aa19.71■□□□□ 0.75
PCDHA1-201ENST00000378133 CTIFO43310 598 aaKnown RBP19.7■□□□□ 0.74
PCDHA1-201ENST00000378133 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.74
PCDHA1-201ENST00000378133 TPCN1Q9ULQ1 816 aa19.7■□□□□ 0.74
PCDHA1-201ENST00000378133 DDX58O95786 925 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms