RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 CCDC171Q6TFL3 1326 aa28.94■■■□□ 2.22
SNX5-201ENST00000377759 NASPP49321 788 aaPredicted RBP28.94■■■□□ 2.22
SNX5-201ENST00000377759 NMIQ13287 307 aaPredicted RBP28.94■■■□□ 2.22
SNX5-201ENST00000377759 BOLA2Q9H3K6 86 aa28.93■■■□□ 2.22
SNX5-201ENST00000377759 RABL6Q3YEC7 729 aaPredicted RBP28.92■■■□□ 2.22
SNX5-201ENST00000377759 TM6SF1Q9BZW5 370 aa28.92■■■□□ 2.22
SNX5-201ENST00000377759 ZSWIM6Q9HCJ5 1215 aa28.92■■■□□ 2.22
SNX5-201ENST00000377759 COL15A1P39059 1388 aa28.92■■■□□ 2.22
SNX5-201ENST00000377759 PTPN12Q05209 780 aaKnown RBP28.91■■■□□ 2.22
SNX5-201ENST00000377759 WDR33Q9C0J8 1336 aaKnown RBP28.91■■■□□ 2.22
SNX5-201ENST00000377759 BRINP3Q76B58 766 aa28.91■■■□□ 2.22
SNX5-201ENST00000377759 MAP4K1Q92918 833 aa28.91■■■□□ 2.22
SNX5-201ENST00000377759 ATP5J2-PTCD1G3V325 749 aa28.9■■■□□ 2.22
SNX5-201ENST00000377759 HIP1O00291 1037 aa28.9■■■□□ 2.22
SNX5-201ENST00000377759 PTCD1O75127 700 aaKnown RBP28.9■■■□□ 2.22
SNX5-201ENST00000377759 LARGE1O95461 756 aa28.9■■■□□ 2.22
SNX5-201ENST00000377759 HSPA2P54652 639 aa28.9■■■□□ 2.22
SNX5-201ENST00000377759 UBE3BQ7Z3V4 1068 aa28.9■■■□□ 2.22
SNX5-201ENST00000377759 JAKMIP1Q96N16 626 aaKnown RBP28.9■■■□□ 2.22
SNX5-201ENST00000377759 PRIM1P49642 420 aaKnown RBP28.9■■■□□ 2.22
SNX5-201ENST00000377759 CASP7P55210 303 aa28.9■■■□□ 2.22
SNX5-201ENST00000377759 RBM8AQ9Y5S9 174 aaKnown RBP28.9■■■□□ 2.22
SNX5-201ENST00000377759 VPS53Q5VIR6 699 aa28.89■■■□□ 2.22
SNX5-201ENST00000377759 PARP4Q9UKK3 1724 aaKnown RBP28.89■■■□□ 2.22
SNX5-201ENST00000377759 ARFGEF2Q9Y6D5 1785 aa28.89■■■□□ 2.22
SNX5-201ENST00000377759 A0A0D9SFI3 127 aa28.89■■■□□ 2.21
SNX5-201ENST00000377759 PLBD2Q8NHP8 589 aa28.89■■■□□ 2.21
SNX5-201ENST00000377759 PPP1R9BQ96SB3 815 aa28.89■■■□□ 2.21
SNX5-201ENST00000377759 RBSNQ9H1K0 784 aa28.89■■■□□ 2.21
SNX5-201ENST00000377759 NBPF26B4DH59 902 aa28.88■■■□□ 2.21
SNX5-201ENST00000377759 MBD3O95983 291 aa28.88■■■□□ 2.21
SNX5-201ENST00000377759 NBPF14Q5TI25 921 aa28.88■■■□□ 2.21
SNX5-201ENST00000377759 NBPF10Q6P3W6 841 aaKnown RBP28.88■■■□□ 2.21
SNX5-201ENST00000377759 NBPF15Q8N660 670 aa28.88■■■□□ 2.21
SNX5-201ENST00000377759 CREB3L3Q68CJ9 461 aa28.87■■■□□ 2.21
SNX5-201ENST00000377759 PDRG1Q9NUG6 133 aa28.87■■■□□ 2.21
SNX5-201ENST00000377759 XIRP1Q702N8 1843 aaKnown RBP28.87■■■□□ 2.21
SNX5-201ENST00000377759 AFDNP55196 1824 aaKnown RBP28.87■■■□□ 2.21
SNX5-201ENST00000377759 ERBB4Q15303 1308 aa28.86■■■□□ 2.21
SNX5-201ENST00000377759 WDR17Q8IZU2 1322 aa28.86■■■□□ 2.21
SNX5-201ENST00000377759 A0A087WZG4 1122 aa28.86■■■□□ 2.21
SNX5-201ENST00000377759 FSD1Q9BTV5 496 aa28.86■■■□□ 2.21
SNX5-201ENST00000377759 DBNLQ9UJU6 430 aaKnown RBP28.86■■■□□ 2.21
SNX5-201ENST00000377759 TFCP2Q12800 502 aa28.86■■■□□ 2.21
SNX5-201ENST00000377759 CYP46A1Q9Y6A2 500 aa28.86■■■□□ 2.21
SNX5-201ENST00000377759 LAMB4A4D0S4 1761 aa28.86■■■□□ 2.21
SNX5-201ENST00000377759 MED23Q9ULK4 1368 aa28.85■■■□□ 2.21
SNX5-201ENST00000377759 CCDC173Q0VFZ6 552 aa28.85■■■□□ 2.21
SNX5-201ENST00000377759 FOXD4L6Q3SYB3 417 aaPredicted RBP28.85■■■□□ 2.21
SNX5-201ENST00000377759 TNNI3KQ59H18 835 aa28.85■■■□□ 2.21
SNX5-201ENST00000377759 FOXD4L3Q6VB84 417 aaPredicted RBP28.85■■■□□ 2.21
SNX5-201ENST00000377759 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.85■■■□□ 2.21
SNX5-201ENST00000377759 FPGT-TNNI3KV9GXZ4 949 aa28.85■■■□□ 2.21
SNX5-201ENST00000377759 CLCN1P35523 988 aa28.85■■■□□ 2.21
SNX5-201ENST00000377759 COL9A3Q14050 684 aaPredicted RBP28.85■■■□□ 2.21
SNX5-201ENST00000377759 EDC3Q96F86 508 aaKnown RBP28.85■■■□□ 2.21
SNX5-201ENST00000377759 ZCRB1Q8TBF4 217 aaKnown RBP28.84■■■□□ 2.21
SNX5-201ENST00000377759 DDX54Q8TDD1 881 aaKnown RBP28.84■■■□□ 2.21
SNX5-201ENST00000377759 GDPD2Q9HCC8 539 aa28.84■■■□□ 2.21
SNX5-201ENST00000377759 ATP5JP18859 108 aa28.83■■■□□ 2.21
SNX5-201ENST00000377759 SYT1P21579 422 aa28.83■■■□□ 2.21
SNX5-201ENST00000377759 PRDM11Q9NQV5 511 aa28.83■■■□□ 2.21
SNX5-201ENST00000377759 SLC27A2O14975 620 aa28.83■■■□□ 2.21
SNX5-201ENST00000377759 ZKSCAN1P17029 563 aaPredicted RBP28.83■■■□□ 2.21
SNX5-201ENST00000377759 ST3GAL1Q11201 340 aa28.83■■■□□ 2.21
SNX5-201ENST00000377759 LRSAM1Q6UWE0 723 aa28.83■■■□□ 2.21
SNX5-201ENST00000377759 PCDH11XQ9BZA7 1347 aa28.83■■■□□ 2.2
SNX5-201ENST00000377759 PCDH11YQ9BZA8 1340 aa28.83■■■□□ 2.2
SNX5-201ENST00000377759 SYCE3A1L190 88 aa28.82■■■□□ 2.2
SNX5-201ENST00000377759 GADD45BO75293 160 aaPredicted RBP28.82■■■□□ 2.2
SNX5-201ENST00000377759 ZSCAN22P10073 491 aaPredicted RBP28.82■■■□□ 2.2
SNX5-201ENST00000377759 ESPNB1AK53 854 aa28.82■■■□□ 2.2
SNX5-201ENST00000377759 TOM1L2Q6ZVM7 507 aa28.82■■■□□ 2.2
SNX5-201ENST00000377759 ZNF589Q86UQ0 364 aaPredicted RBP28.82■■■□□ 2.2
SNX5-201ENST00000377759 USP48Q86UV5 1035 aa28.82■■■□□ 2.2
SNX5-201ENST00000377759 SMC3Q9UQE7 1217 aa28.82■■■□□ 2.2
SNX5-201ENST00000377759 JCADQ9P266 1359 aa28.82■■■□□ 2.2
SNX5-201ENST00000377759 STX6O43752 255 aa28.81■■■□□ 2.2
SNX5-201ENST00000377759 CCDC83Q8IWF9 413 aa28.81■■■□□ 2.2
SNX5-201ENST00000377759 H7C1W4 665 aa28.81■■■□□ 2.2
SNX5-201ENST00000377759 ZSCAN31Q96LW9 406 aaPredicted RBP28.81■■■□□ 2.2
SNX5-201ENST00000377759 TCHHQ07283 1943 aa28.81■■■□□ 2.2
SNX5-201ENST00000377759 FOXO4P98177 505 aa28.8■■■□□ 2.2
SNX5-201ENST00000377759 TTLL7Q6ZT98 887 aa28.8■■■□□ 2.2
SNX5-201ENST00000377759 TMEM87AQ8NBN3 555 aa28.8■■■□□ 2.2
SNX5-201ENST00000377759 TRIM44Q96DX7 344 aaPredicted RBP28.8■■■□□ 2.2
SNX5-201ENST00000377759 SH2B1Q9NRF2 756 aaPredicted RBP28.8■■■□□ 2.2
SNX5-201ENST00000377759 ERVV-2B6SEH9 535 aa28.8■■■□□ 2.2
SNX5-201ENST00000377759 KCNJ4P48050 445 aa28.8■■■□□ 2.2
SNX5-201ENST00000377759 ME3Q16798 604 aa28.8■■■□□ 2.2
SNX5-201ENST00000377759 TAF6LQ9Y6J9 622 aa28.8■■■□□ 2.2
SNX5-201ENST00000377759 NKX1-1Q15270 411 aaPredicted RBP28.79■■■□□ 2.2
SNX5-201ENST00000377759 LMBR1LQ6UX01 489 aa28.79■■■□□ 2.2
SNX5-201ENST00000377759 SOS2Q07890 1332 aaPredicted RBP28.79■■■□□ 2.2
SNX5-201ENST00000377759 COL5A2P05997 1499 aaPredicted RBP28.79■■■□□ 2.2
SNX5-201ENST00000377759 UBR2Q8IWV8 1755 aa28.78■■■□□ 2.2
SNX5-201ENST00000377759 DTNBO60941 627 aa28.78■■■□□ 2.2
SNX5-201ENST00000377759 DBNDD2Q9BQY9 259 aa28.78■■■□□ 2.2
SNX5-201ENST00000377759 KCPQ6ZWJ8 1503 aa28.77■■■□□ 2.2
SNX5-201ENST00000377759 A1BGP04217 495 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms