RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 EAF2Q96CJ1 260 aaPredicted RBP18.78■□□□□ 0.6
SSH3-203ENST00000376757 FSD1Q9BTV5 496 aa18.78■□□□□ 0.6
SSH3-203ENST00000376757 ZNF589Q86UQ0 364 aaPredicted RBP18.78■□□□□ 0.6
SSH3-203ENST00000376757 TRIM5Q9C035 493 aa18.78■□□□□ 0.6
SSH3-203ENST00000376757 MRVI1Q9Y6F6 885 aa18.78■□□□□ 0.6
SSH3-203ENST00000376757 ADAMTS13Q76LX8 1427 aa18.78■□□□□ 0.6
SSH3-203ENST00000376757 PTPRUQ92729 1446 aa18.78■□□□□ 0.6
SSH3-203ENST00000376757 TNRQ92752 1358 aa18.78■□□□□ 0.6
SSH3-203ENST00000376757 CCDC171Q6TFL3 1326 aa18.78■□□□□ 0.6
SSH3-203ENST00000376757 DNAJC25Q9H1X3 360 aa18.78■□□□□ 0.6
SSH3-203ENST00000376757 TNMDQ9H2S6 317 aa18.78■□□□□ 0.6
SSH3-203ENST00000376757 AOX1Q06278 1338 aa18.77■□□□□ 0.6
SSH3-203ENST00000376757 MAP3K11Q16584 847 aa18.77■□□□□ 0.6
SSH3-203ENST00000376757 VPS53Q5VIR6 699 aa18.77■□□□□ 0.6
SSH3-203ENST00000376757 BICD2Q8TD16 824 aa18.77■□□□□ 0.6
SSH3-203ENST00000376757 FTOQ9C0B1 505 aaKnown RBP eCLIP18.77■□□□□ 0.6
SSH3-203ENST00000376757 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.6
SSH3-203ENST00000376757 XRN1Q8IZH2 1706 aaKnown RBP18.77■□□□□ 0.6
SSH3-203ENST00000376757 KRT85P78386 507 aa18.77■□□□□ 0.59
SSH3-203ENST00000376757 RUFY2Q8WXA3 655 aa18.77■□□□□ 0.59
SSH3-203ENST00000376757 PRIMPOLQ96LW4 560 aa18.77■□□□□ 0.59
SSH3-203ENST00000376757 SPATA31D1Q6ZQQ2 1576 aa18.77■□□□□ 0.59
SSH3-203ENST00000376757 NR1I2O75469 434 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 LETM1O95202 739 aaPredicted RBP18.76■□□□□ 0.59
SSH3-203ENST00000376757 ARID5BQ14865 1188 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 SLFNL1Q499Z3 407 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 ZNF530Q6P9A1 599 aaPredicted RBP18.76■□□□□ 0.59
SSH3-203ENST00000376757 CCDC129Q6ZRS4 1044 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 RGPD1P0DJD0 1748 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 SLC27A2O14975 620 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 HMGN5P82970 282 aaKnown RBP18.76■□□□□ 0.59
SSH3-203ENST00000376757 NECTIN1Q15223 517 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 SPATA32Q96LK8 384 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 CBX8Q9HC52 389 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 NAP1L2Q9ULW6 460 aaPredicted RBP18.76■□□□□ 0.59
SSH3-203ENST00000376757 ADCY9O60503 1353 aa18.76■□□□□ 0.59
SSH3-203ENST00000376757 SUCLG2Q96I99 432 aa18.75■□□□□ 0.59
SSH3-203ENST00000376757 BICC1Q9H694 974 aaKnown RBP18.75■□□□□ 0.59
SSH3-203ENST00000376757 SPTLC3Q9NUV7 552 aa18.75■□□□□ 0.59
SSH3-203ENST00000376757 SASH1O94885 1247 aa18.75■□□□□ 0.59
SSH3-203ENST00000376757 MYL6BP14649 208 aa18.75■□□□□ 0.59
SSH3-203ENST00000376757 PDCL2Q8N4E4 241 aa18.75■□□□□ 0.59
SSH3-203ENST00000376757 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.75■□□□□ 0.59
SSH3-203ENST00000376757 V9GYY5 206 aaPredicted RBP18.75■□□□□ 0.59
SSH3-203ENST00000376757 TECPR2O15040 1411 aa18.74■□□□□ 0.59
SSH3-203ENST00000376757 CHAF1AQ13111 956 aaPredicted RBP18.74■□□□□ 0.59
SSH3-203ENST00000376757 BLOC1S2Q6QNY1 142 aa18.74■□□□□ 0.59
SSH3-203ENST00000376757 FAM200AQ8TCP9 573 aa18.74■□□□□ 0.59
SSH3-203ENST00000376757 SIRT1Q96EB6 747 aa18.74■□□□□ 0.59
SSH3-203ENST00000376757 SEC62Q99442 399 aaKnown RBP18.74■□□□□ 0.59
SSH3-203ENST00000376757 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
SSH3-203ENST00000376757 HSP90B1P14625 803 aaKnown RBP18.73■□□□□ 0.59
SSH3-203ENST00000376757 MTERF4Q7Z6M4 381 aaKnown RBP18.73■□□□□ 0.59
SSH3-203ENST00000376757 RGPD8O14715 1765 aaPredicted RBP18.73■□□□□ 0.59
SSH3-203ENST00000376757 FAM208AQ9UK61 1670 aaKnown RBP18.73■□□□□ 0.59
SSH3-203ENST00000376757 IL17RAQ96F46 866 aa18.73■□□□□ 0.59
SSH3-203ENST00000376757 HTATSF1O43719 755 aaKnown RBP18.72■□□□□ 0.59
SSH3-203ENST00000376757 ZSCAN20P17040 1043 aaPredicted RBP18.72■□□□□ 0.59
SSH3-203ENST00000376757 GUCY1B3Q02153 619 aa18.72■□□□□ 0.59
SSH3-203ENST00000376757 SLC39A6Q13433 755 aa18.72■□□□□ 0.59
SSH3-203ENST00000376757 GPATCH3Q96I76 525 aa18.72■□□□□ 0.59
SSH3-203ENST00000376757 G3BP1Q13283 466 aaKnown RBP eCLIP18.72■□□□□ 0.59
SSH3-203ENST00000376757 SH2B1Q9NRF2 756 aaPredicted RBP18.72■□□□□ 0.59
SSH3-203ENST00000376757 KCNA6P17658 529 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 HSP90AB4PQ58FF6 505 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 SYTL4Q96C24 671 aaPredicted RBP18.71■□□□□ 0.59
SSH3-203ENST00000376757 EVI5LQ96CN4 794 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 DNAJC2Q99543 621 aaKnown RBP18.71■□□□□ 0.59
SSH3-203ENST00000376757 NPHP1O15259 732 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 TOB2Q14106 344 aaPredicted RBP18.71■□□□□ 0.59
SSH3-203ENST00000376757 CCDC144BQ3MJ40 725 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 CCDC144CPQ8IYA2 1237 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 KAZALD1Q96I82 304 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 PGBD1Q96JS3 809 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.59
SSH3-203ENST00000376757 SMAP1Q8IYB5 467 aaPredicted RBP18.7■□□□□ 0.58
SSH3-203ENST00000376757 LEO1Q8WVC0 666 aaPredicted RBP18.7■□□□□ 0.58
SSH3-203ENST00000376757 ZSCAN31Q96LW9 406 aaPredicted RBP18.7■□□□□ 0.58
SSH3-203ENST00000376757 ZNF165P49910 485 aa18.7■□□□□ 0.58
SSH3-203ENST00000376757 FGD1P98174 961 aa18.7■□□□□ 0.58
SSH3-203ENST00000376757 MAP4K1Q92918 833 aa18.69■□□□□ 0.58
SSH3-203ENST00000376757 BRF1Q92994 677 aa18.69■□□□□ 0.58
SSH3-203ENST00000376757 GOLGA6L6A8MZA4 724 aa18.69■□□□□ 0.58
SSH3-203ENST00000376757 CHST3Q7LGC8 479 aa18.69■□□□□ 0.58
SSH3-203ENST00000376757 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
SSH3-203ENST00000376757 H3BQV1 296 aa18.68■□□□□ 0.58
SSH3-203ENST00000376757 IFFO2Q5TF58 517 aa18.68■□□□□ 0.58
SSH3-203ENST00000376757 FILIP1Q7Z7B0 1213 aa18.68■□□□□ 0.58
SSH3-203ENST00000376757 CACTINQ8WUQ7 758 aaKnown RBP18.68■□□□□ 0.58
SSH3-203ENST00000376757 TRMT1Q9NXH9 659 aaKnown RBP18.68■□□□□ 0.58
SSH3-203ENST00000376757 USP27XA6NNY8 438 aa18.68■□□□□ 0.58
SSH3-203ENST00000376757 TNNT1P13805 278 aa18.68■□□□□ 0.58
SSH3-203ENST00000376757 EPHA10Q5JZY3 1008 aa18.68■□□□□ 0.58
SSH3-203ENST00000376757 DBF4Q9UBU7 674 aaPredicted RBP18.68■□□□□ 0.58
SSH3-203ENST00000376757 CLIP2Q9UDT6 1046 aa18.68■□□□□ 0.58
SSH3-203ENST00000376757 USP16Q9Y5T5 823 aa18.68■□□□□ 0.58
SSH3-203ENST00000376757 A0A0G2JLW4 131 aa18.67■□□□□ 0.58
SSH3-203ENST00000376757 RPS6KB1P23443 525 aa18.67■□□□□ 0.58
SSH3-203ENST00000376757 GTF2F1P35269 517 aaKnown RBP eCLIP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms