RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 LRRFIP1Q32MZ4 808 aaKnown RBP15.5■□□□□ 0.07
CUL4A-203ENST00000375441 PPP4R3BQ5MIZ7 849 aa15.5■□□□□ 0.07
CUL4A-203ENST00000375441 TSC1Q92574 1164 aa15.5■□□□□ 0.07
CUL4A-203ENST00000375441 STK38Q15208 465 aa15.5■□□□□ 0.07
CUL4A-203ENST00000375441 LUZP1Q86V48 1076 aa15.5■□□□□ 0.07
CUL4A-203ENST00000375441 LRRC2Q9BYS8 371 aa15.5■□□□□ 0.07
CUL4A-203ENST00000375441 EPB41L2O43491 1005 aaKnown RBP15.49■□□□□ 0.07
CUL4A-203ENST00000375441 SMC2O95347 1197 aa15.49■□□□□ 0.07
CUL4A-203ENST00000375441 APPP05067 770 aa15.49■□□□□ 0.07
CUL4A-203ENST00000375441 RALYLQ86SE5 291 aaKnown RBP15.49■□□□□ 0.07
CUL4A-203ENST00000375441 NEK1Q96PY6 1258 aa15.49■□□□□ 0.07
CUL4A-203ENST00000375441 KCNQ3O43525 872 aa15.49■□□□□ 0.07
CUL4A-203ENST00000375441 TOMM22Q9NS69 142 aa15.49■□□□□ 0.07
CUL4A-203ENST00000375441 BABAM1Q9NWV8 329 aa15.49■□□□□ 0.07
CUL4A-203ENST00000375441 TNNT1P13805 278 aa15.49■□□□□ 0.07
CUL4A-203ENST00000375441 PTGS1P23219 599 aa15.49■□□□□ 0.07
CUL4A-203ENST00000375441 TATP17735 454 aaPredicted RBP15.48■□□□□ 0.07
CUL4A-203ENST00000375441 LSG1Q9H089 658 aaKnown RBP15.48■□□□□ 0.07
CUL4A-203ENST00000375441 EIF4A1P60842 406 aaKnown RBP15.48■□□□□ 0.07
CUL4A-203ENST00000375441 CCT2P78371 535 aaKnown RBP15.48■□□□□ 0.07
CUL4A-203ENST00000375441 AKAP4Q5JQC9 854 aa15.48■□□□□ 0.07
CUL4A-203ENST00000375441 LINS1Q8NG48 757 aa15.48■□□□□ 0.07
CUL4A-203ENST00000375441 TMEM2Q9UHN6 1383 aa15.48■□□□□ 0.07
CUL4A-203ENST00000375441 PIK3C2BO00750 1634 aa15.48■□□□□ 0.07
CUL4A-203ENST00000375441 A2ML1A8K2U0 1454 aa15.48■□□□□ 0.07
CUL4A-203ENST00000375441 BRF1Q92994 677 aa15.48■□□□□ 0.07
CUL4A-203ENST00000375441 IGSF1Q8N6C5 1336 aa15.48■□□□□ 0.07
CUL4A-203ENST00000375441 TRDNQ13061 729 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 CPLX2Q6PUV4 134 aaKnown RBP15.47■□□□□ 0.07
CUL4A-203ENST00000375441 USP6P35125 1406 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 ARHGEF28Q8N1W1 1705 aaKnown RBP15.47■□□□□ 0.07
CUL4A-203ENST00000375441 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 ATF3P18847 181 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 ME3Q16798 604 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 ADCK5Q3MIX3 580 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 DNAJC25Q9H1X3 360 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 SLC39A6Q13433 755 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 CEP57L1Q8IYX8 460 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 MYRIPQ8NFW9 859 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 HMG20BQ9P0W2 317 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 MTMR6Q9Y217 621 aa15.47■□□□□ 0.07
CUL4A-203ENST00000375441 KLHDC4Q8TBB5 520 aa15.46■□□□□ 0.07
CUL4A-203ENST00000375441 BICC1Q9H694 974 aaKnown RBP15.46■□□□□ 0.07
CUL4A-203ENST00000375441 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
CUL4A-203ENST00000375441 TSPOAP1O95153 1857 aa15.46■□□□□ 0.07
CUL4A-203ENST00000375441 BEND3Q5T5X7 828 aa15.46■□□□□ 0.07
CUL4A-203ENST00000375441 DDX46Q7L014 1031 aaKnown RBP15.46■□□□□ 0.07
CUL4A-203ENST00000375441 UBE3BQ7Z3V4 1068 aa15.46■□□□□ 0.07
CUL4A-203ENST00000375441 VIRMAQ69YN4 1812 aaKnown RBP15.46■□□□□ 0.07
CUL4A-203ENST00000375441 NPHP3Q7Z494 1330 aa15.46■□□□□ 0.07
CUL4A-203ENST00000375441 ATP5J2-PTCD1G3V325 749 aa15.46■□□□□ 0.07
CUL4A-203ENST00000375441 SLC27A2O14975 620 aa15.46■□□□□ 0.07
CUL4A-203ENST00000375441 PTCD1O75127 700 aaKnown RBP15.46■□□□□ 0.07
CUL4A-203ENST00000375441 KCNA6P17658 529 aa15.46■□□□□ 0.07
CUL4A-203ENST00000375441 FKBP4Q02790 459 aaKnown RBP eCLIP15.46■□□□□ 0.07
CUL4A-203ENST00000375441 CDC37L1Q7L3B6 337 aa15.46■□□□□ 0.06
CUL4A-203ENST00000375441 NBPF6Q5VWK0 638 aa15.45■□□□□ 0.06
CUL4A-203ENST00000375441 NBPF4Q96M43 638 aa15.45■□□□□ 0.06
CUL4A-203ENST00000375441 A0A087WZG4 1122 aa15.45■□□□□ 0.06
CUL4A-203ENST00000375441 Q6ZUG5 572 aa15.45■□□□□ 0.06
CUL4A-203ENST00000375441 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
CUL4A-203ENST00000375441 PI4K2BQ8TCG2 481 aa15.45■□□□□ 0.06
CUL4A-203ENST00000375441 XAGE3Q8WTP9 111 aa15.45■□□□□ 0.06
CUL4A-203ENST00000375441 IP6K1Q92551 441 aa15.45■□□□□ 0.06
CUL4A-203ENST00000375441 TBX22Q9Y458 520 aa15.45■□□□□ 0.06
CUL4A-203ENST00000375441 LARGE1O95461 756 aa15.44■□□□□ 0.06
CUL4A-203ENST00000375441 PIP4K2AP48426 406 aaPredicted RBP15.44■□□□□ 0.06
CUL4A-203ENST00000375441 ANKRD24Q8TF21 1146 aa15.44■□□□□ 0.06
CUL4A-203ENST00000375441 TRMT1Q9NXH9 659 aaKnown RBP15.44■□□□□ 0.06
CUL4A-203ENST00000375441 FRMPD1Q5SYB0 1578 aa15.44■□□□□ 0.06
CUL4A-203ENST00000375441 TRIM29Q14134 588 aa15.44■□□□□ 0.06
CUL4A-203ENST00000375441 CCAR1Q8IX12 1150 aaKnown RBP15.44■□□□□ 0.06
CUL4A-203ENST00000375441 CPS1P31327 1500 aa15.44■□□□□ 0.06
CUL4A-203ENST00000375441 HOXB7P09629 217 aa15.44■□□□□ 0.06
CUL4A-203ENST00000375441 PTPN14Q15678 1187 aa15.44■□□□□ 0.06
CUL4A-203ENST00000375441 TM6SF1Q9BZW5 370 aa15.44■□□□□ 0.06
CUL4A-203ENST00000375441 ZHX1Q9UKY1 873 aaPredicted RBP15.44■□□□□ 0.06
CUL4A-203ENST00000375441 GOLIM4O00461 696 aa15.43■□□□□ 0.06
CUL4A-203ENST00000375441 CABP4P57796 275 aa15.43■□□□□ 0.06
CUL4A-203ENST00000375441 NFXL1Q6ZNB6 911 aa15.43■□□□□ 0.06
CUL4A-203ENST00000375441 TPCN1Q9ULQ1 816 aa15.43■□□□□ 0.06
CUL4A-203ENST00000375441 FSIP1Q8NA03 581 aa15.43■□□□□ 0.06
CUL4A-203ENST00000375441 SUCLG2Q96I99 432 aa15.43■□□□□ 0.06
CUL4A-203ENST00000375441 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
CUL4A-203ENST00000375441 ZSWIM6Q9HCJ5 1215 aa15.43■□□□□ 0.06
CUL4A-203ENST00000375441 ANO10Q9NW15 660 aa15.43■□□□□ 0.06
CUL4A-203ENST00000375441 RNMTO43148 476 aaKnown RBP15.42■□□□□ 0.06
CUL4A-203ENST00000375441 DHX16O60231 1041 aaKnown RBP15.42■□□□□ 0.06
CUL4A-203ENST00000375441 LIG1P18858 919 aa15.42■□□□□ 0.06
CUL4A-203ENST00000375441 RPS6KB1P23443 525 aa15.42■□□□□ 0.06
CUL4A-203ENST00000375441 CRB1P82279 1406 aa15.42■□□□□ 0.06
CUL4A-203ENST00000375441 ANKRD13DQ6ZTN6 518 aa15.42■□□□□ 0.06
CUL4A-203ENST00000375441 TTC6Q86TZ1 520 aa15.42■□□□□ 0.06
CUL4A-203ENST00000375441 ZSCAN16Q9H4T2 348 aaPredicted RBP15.42■□□□□ 0.06
CUL4A-203ENST00000375441 DIP2CQ9Y2E4 1556 aa15.42■□□□□ 0.06
CUL4A-203ENST00000375441 CDK11BP21127 795 aaKnown RBP15.42■□□□□ 0.06
CUL4A-203ENST00000375441 CCAR2Q8N163 923 aaKnown RBP15.42■□□□□ 0.06
CUL4A-203ENST00000375441 EAF2Q96CJ1 260 aaPredicted RBP15.42■□□□□ 0.06
CUL4A-203ENST00000375441 AK9Q5TCS8 1911 aa15.42■□□□□ 0.06
CUL4A-203ENST00000375441 REREQ9P2R6 1566 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms