RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 UTP14AQ9BVJ6 771 aaKnown RBP19.08■□□□□ 0.64
HSPG2-201ENST00000374673 CD2APQ9Y5K6 639 aa19.08■□□□□ 0.64
HSPG2-201ENST00000374673 RIC1Q4ADV7 1423 aa19.08■□□□□ 0.64
HSPG2-201ENST00000374673 FAM177BA6PVY3 158 aa19.07■□□□□ 0.64
HSPG2-201ENST00000374673 NEURL1BA8MQ27 555 aa19.07■□□□□ 0.64
HSPG2-201ENST00000374673 ST5P78524 1137 aa19.07■□□□□ 0.64
HSPG2-201ENST00000374673 CWC25Q9NXE8 425 aaPredicted RBP19.07■□□□□ 0.64
HSPG2-201ENST00000374673 DDX60Q8IY21 1712 aaKnown RBP19.07■□□□□ 0.64
HSPG2-201ENST00000374673 TNRC6CQ9HCJ0 1690 aaKnown RBP19.06■□□□□ 0.64
HSPG2-201ENST00000374673 NPHP1O15259 732 aa19.06■□□□□ 0.64
HSPG2-201ENST00000374673 CWF19L2Q2TBE0 894 aaKnown RBP19.06■□□□□ 0.64
HSPG2-201ENST00000374673 FHDC1Q9C0D6 1143 aaPredicted RBP19.06■□□□□ 0.64
HSPG2-201ENST00000374673 DLEC1Q9Y238 1755 aa19.06■□□□□ 0.64
HSPG2-201ENST00000374673 ZKSCAN2Q63HK3 967 aa19.05■□□□□ 0.64
HSPG2-201ENST00000374673 SLC4A10Q6U841 1118 aa19.05■□□□□ 0.64
HSPG2-201ENST00000374673 ATF7IPQ6VMQ6 1270 aa19.05■□□□□ 0.64
HSPG2-201ENST00000374673 NUTM1Q86Y26 1132 aa19.05■□□□□ 0.64
HSPG2-201ENST00000374673 FRAT1Q92837 279 aaPredicted RBP19.05■□□□□ 0.64
HSPG2-201ENST00000374673 TRMT112Q9UI30 125 aaKnown RBP19.05■□□□□ 0.64
HSPG2-201ENST00000374673 ABCC12Q96J65 1359 aa19.05■□□□□ 0.64
HSPG2-201ENST00000374673 ABCC4O15439 1325 aa19.04■□□□□ 0.64
HSPG2-201ENST00000374673 SH3TC1Q8TE82 1336 aa19.04■□□□□ 0.64
HSPG2-201ENST00000374673 ALDH1L1O75891 902 aa19.04■□□□□ 0.64
HSPG2-201ENST00000374673 COL11A2P13942 1736 aaPredicted RBP19.04■□□□□ 0.64
HSPG2-201ENST00000374673 TRIM27P14373 513 aa19.04■□□□□ 0.64
HSPG2-201ENST00000374673 GTF2E1P29083 439 aaPredicted RBP19.04■□□□□ 0.64
HSPG2-201ENST00000374673 ERFEQ4G0M1 354 aa19.04■□□□□ 0.64
HSPG2-201ENST00000374673 KLHL34Q8N239 644 aa19.04■□□□□ 0.64
HSPG2-201ENST00000374673 ZBTB38Q8NAP3 1195 aaPredicted RBP19.04■□□□□ 0.64
HSPG2-201ENST00000374673 BRIP1Q9BX63 1249 aa19.04■□□□□ 0.64
HSPG2-201ENST00000374673 SRCIN1Q9C0H9 1055 aa19.04■□□□□ 0.64
HSPG2-201ENST00000374673 BRCA1P38398 1863 aaKnown RBP19.03■□□□□ 0.64
HSPG2-201ENST00000374673 PCCAP05165 728 aaPredicted RBP19.03■□□□□ 0.64
HSPG2-201ENST00000374673 TGFB2P61812 414 aa19.03■□□□□ 0.64
HSPG2-201ENST00000374673 GCKRQ14397 625 aa19.03■□□□□ 0.64
HSPG2-201ENST00000374673 SLC10A5Q5PT55 438 aa19.03■□□□□ 0.64
HSPG2-201ENST00000374673 CCDC24Q8N4L8 307 aa19.03■□□□□ 0.64
HSPG2-201ENST00000374673 SYT17Q9BSW7 474 aa19.03■□□□□ 0.64
HSPG2-201ENST00000374673 MYH3P11055 1940 aa19.02■□□□□ 0.63
HSPG2-201ENST00000374673 CDHR2Q9BYE9 1310 aa19.01■□□□□ 0.63
HSPG2-201ENST00000374673 PDE6BP35913 854 aa19.01■□□□□ 0.63
HSPG2-201ENST00000374673 CCT4P50991 539 aaKnown RBP19.01■□□□□ 0.63
HSPG2-201ENST00000374673 FAM89AQ96GI7 184 aa19.01■□□□□ 0.63
HSPG2-201ENST00000374673 PDZRN3Q9UPQ7 1066 aa19.01■□□□□ 0.63
HSPG2-201ENST00000374673 KLRG2A4D1S0 409 aaPredicted RBP19■□□□□ 0.63
HSPG2-201ENST00000374673 H7C1W4 665 aa19■□□□□ 0.63
HSPG2-201ENST00000374673 SYNE4Q8N205 404 aa19■□□□□ 0.63
HSPG2-201ENST00000374673 NLGN2Q8NFZ4 835 aa19■□□□□ 0.63
HSPG2-201ENST00000374673 TNNQ9UQP3 1299 aa19■□□□□ 0.63
HSPG2-201ENST00000374673 INTS3Q68E01 1043 aaKnown RBP18.99■□□□□ 0.63
HSPG2-201ENST00000374673 GRM8O00222 908 aa18.98■□□□□ 0.63
HSPG2-201ENST00000374673 IRS4O14654 1257 aaPredicted RBP18.98■□□□□ 0.63
HSPG2-201ENST00000374673 HSP90B1P14625 803 aaKnown RBP18.98■□□□□ 0.63
HSPG2-201ENST00000374673 CASP7P55210 303 aa18.98■□□□□ 0.63
HSPG2-201ENST00000374673 RTL5Q5HYW3 569 aaPredicted RBP18.98■□□□□ 0.63
HSPG2-201ENST00000374673 CLUAP1Q96AJ1 413 aa18.98■□□□□ 0.63
HSPG2-201ENST00000374673 UTYO14607 1347 aa18.98■□□□□ 0.63
HSPG2-201ENST00000374673 HCLS1P14317 486 aaPredicted RBP18.97■□□□□ 0.63
HSPG2-201ENST00000374673 DPEP1P16444 411 aa18.97■□□□□ 0.63
HSPG2-201ENST00000374673 CRY2Q49AN0 593 aa18.97■□□□□ 0.63
HSPG2-201ENST00000374673 UBE3BQ7Z3V4 1068 aa18.97■□□□□ 0.63
HSPG2-201ENST00000374673 C2CD5Q86YS7 1000 aa18.97■□□□□ 0.63
HSPG2-201ENST00000374673 DZIP1LQ8IYY4 767 aaKnown RBP18.97■□□□□ 0.63
HSPG2-201ENST00000374673 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.97■□□□□ 0.63
HSPG2-201ENST00000374673 NLRP3Q96P20 1036 aa18.97■□□□□ 0.63
HSPG2-201ENST00000374673 CACNA1SQ13698 1873 aa18.97■□□□□ 0.63
HSPG2-201ENST00000374673 H0YIN7 160 aa18.96■□□□□ 0.63
HSPG2-201ENST00000374673 SRGNP10124 158 aa18.96■□□□□ 0.63
HSPG2-201ENST00000374673 MS4A1P11836 297 aa18.96■□□□□ 0.63
HSPG2-201ENST00000374673 CHRNA5P30532 468 aa18.96■□□□□ 0.63
HSPG2-201ENST00000374673 FTSJ3Q8IY81 847 aaKnown RBP18.96■□□□□ 0.63
HSPG2-201ENST00000374673 JARID2Q92833 1246 aaPredicted RBP18.96■□□□□ 0.63
HSPG2-201ENST00000374673 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
HSPG2-201ENST00000374673 C9orf78Q9NZ63 289 aaPredicted RBP18.96■□□□□ 0.63
HSPG2-201ENST00000374673 A0A0G2JLW4 131 aa18.95■□□□□ 0.62
HSPG2-201ENST00000374673 PDE8AO60658 829 aa18.95■□□□□ 0.62
HSPG2-201ENST00000374673 KCNA3P22001 575 aa18.95■□□□□ 0.62
HSPG2-201ENST00000374673 C3orf67Q6ZVT6 689 aa18.95■□□□□ 0.62
HSPG2-201ENST00000374673 TMEM57Q8N5G2 664 aa18.95■□□□□ 0.62
HSPG2-201ENST00000374673 PLIN1O60240 522 aa18.94■□□□□ 0.62
HSPG2-201ENST00000374673 RLBP1P12271 317 aa18.94■□□□□ 0.62
HSPG2-201ENST00000374673 SF3B3Q15393 1217 aaKnown RBP18.94■□□□□ 0.62
HSPG2-201ENST00000374673 STYK1Q6J9G0 422 aa18.94■□□□□ 0.62
HSPG2-201ENST00000374673 MASTLQ96GX5 879 aa18.94■□□□□ 0.62
HSPG2-201ENST00000374673 USP44Q9H0E7 712 aa18.94■□□□□ 0.62
HSPG2-201ENST00000374673 ARFGEF1Q9Y6D6 1849 aa18.94■□□□□ 0.62
HSPG2-201ENST00000374673 NBPF7P0C2Y1 421 aaPredicted RBP18.93■□□□□ 0.62
HSPG2-201ENST00000374673 NPR1P16066 1061 aa18.93■□□□□ 0.62
HSPG2-201ENST00000374673 RRP1P56182 461 aaKnown RBP18.92■□□□□ 0.62
HSPG2-201ENST00000374673 PDE3AQ14432 1141 aa18.92■□□□□ 0.62
HSPG2-201ENST00000374673 PIM2Q9P1W9 311 aa18.92■□□□□ 0.62
HSPG2-201ENST00000374673 HOXA10P31260 410 aaPredicted RBP18.91■□□□□ 0.62
HSPG2-201ENST00000374673 CTSWP56202 376 aa18.91■□□□□ 0.62
HSPG2-201ENST00000374673 PANK1Q8TE04 598 aa18.91■□□□□ 0.62
HSPG2-201ENST00000374673 RPGRQ92834 1020 aaKnown RBP18.91■□□□□ 0.62
HSPG2-201ENST00000374673 SLX4Q8IY92 1834 aa18.9■□□□□ 0.62
HSPG2-201ENST00000374673 TAF1P21675 1872 aa18.9■□□□□ 0.62
HSPG2-201ENST00000374673 CNKSR1Q969H4 720 aa18.9■□□□□ 0.62
HSPG2-201ENST00000374673 ZNF622Q969S3 477 aaKnown RBP eCLIP18.9■□□□□ 0.62
HSPG2-201ENST00000374673 RBM17Q96I25 401 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms