RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
A1CF-204ENST00000373997 UBE3BQ7Z3V4 1068 aa16.2■□□□□ 0.18
A1CF-204ENST00000373997 KAZALD1Q96I82 304 aa16.2■□□□□ 0.18
A1CF-204ENST00000373997 PALLDQ8WX93 1383 aa16.2■□□□□ 0.18
A1CF-204ENST00000373997 RREB1Q92766 1687 aa16.2■□□□□ 0.18
A1CF-204ENST00000373997 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
A1CF-204ENST00000373997 ZBTB1Q9Y2K1 713 aa16.19■□□□□ 0.18
A1CF-204ENST00000373997 ATRNO75882 1429 aa16.19■□□□□ 0.18
A1CF-204ENST00000373997 KIF6Q6ZMV9 814 aa16.19■□□□□ 0.18
A1CF-204ENST00000373997 GJD4Q96KN9 370 aaPredicted RBP16.19■□□□□ 0.18
A1CF-204ENST00000373997 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
A1CF-204ENST00000373997 A0A087WZG4 1122 aa16.18■□□□□ 0.18
A1CF-204ENST00000373997 ATP6V1AP38606 617 aa16.18■□□□□ 0.18
A1CF-204ENST00000373997 MTX1Q13505 466 aa16.18■□□□□ 0.18
A1CF-204ENST00000373997 FAM182BQ5T319 152 aa16.18■□□□□ 0.18
A1CF-204ENST00000373997 CLEC17AQ6ZS10 378 aa16.18■□□□□ 0.18
A1CF-204ENST00000373997 BRWD3Q6RI45 1802 aa16.18■□□□□ 0.18
A1CF-204ENST00000373997 LOC102724428A0A0B4J2F2 783 aa16.17■□□□□ 0.18
A1CF-204ENST00000373997 SIK1P57059 783 aa16.17■□□□□ 0.18
A1CF-204ENST00000373997 RABEP1Q15276 862 aa16.17■□□□□ 0.18
A1CF-204ENST00000373997 EPHA10Q5JZY3 1008 aa16.17■□□□□ 0.18
A1CF-204ENST00000373997 PANK2Q9BZ23 570 aa16.17■□□□□ 0.18
A1CF-204ENST00000373997 IL1RAPL2Q9NP60 686 aa16.17■□□□□ 0.18
A1CF-204ENST00000373997 PA2G4Q9UQ80 394 aaKnown RBP16.17■□□□□ 0.18
A1CF-204ENST00000373997 ZNF831Q5JPB2 1677 aa16.17■□□□□ 0.18
A1CF-204ENST00000373997 GSPT1P15170 499 aaKnown RBP16.16■□□□□ 0.18
A1CF-204ENST00000373997 OS9Q13438 667 aaPredicted RBP16.16■□□□□ 0.18
A1CF-204ENST00000373997 TTC22Q5TAA0 569 aa16.16■□□□□ 0.18
A1CF-204ENST00000373997 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
A1CF-204ENST00000373997 MYH3P11055 1940 aa16.16■□□□□ 0.18
A1CF-204ENST00000373997 TRPC5Q9UL62 973 aaPredicted RBP16.16■□□□□ 0.18
A1CF-204ENST00000373997 GOLGA6L22H0YM25 854 aa16.15■□□□□ 0.18
A1CF-204ENST00000373997 RAB11FIP3O75154 756 aa16.15■□□□□ 0.18
A1CF-204ENST00000373997 CD2BP2O95400 341 aaKnown RBP16.15■□□□□ 0.18
A1CF-204ENST00000373997 CLCN1P35523 988 aa16.15■□□□□ 0.18
A1CF-204ENST00000373997 ITPK1Q13572 414 aa16.15■□□□□ 0.18
A1CF-204ENST00000373997 PTF1AQ7RTS3 328 aa16.15■□□□□ 0.18
A1CF-204ENST00000373997 SMARCC1Q92922 1105 aaPredicted RBP16.15■□□□□ 0.18
A1CF-204ENST00000373997 MAP3K15Q6ZN16 1313 aa16.15■□□□□ 0.18
A1CF-204ENST00000373997 TSHZ3Q63HK5 1081 aa16.15■□□□□ 0.18
A1CF-204ENST00000373997 RHPN1Q8TCX5 695 aa16.15■□□□□ 0.18
A1CF-204ENST00000373997 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
A1CF-204ENST00000373997 TAF1LQ8IZX4 1826 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 PDE1AP54750 535 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 CASP7P55210 303 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 TCIRG1Q13488 830 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 HSP90AB4PQ58FF6 505 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 CCDC191Q8NCU4 936 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 CCDC87Q9NVE4 849 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 LY75O60449 1722 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 HLFQ16534 295 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 ISCA1Q9BUE6 129 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 SALL3Q9BXA9 1300 aa16.13■□□□□ 0.17
A1CF-204ENST00000373997 H7C1W4 665 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 MX1P20591 662 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
A1CF-204ENST00000373997 INTS5Q6P9B9 1019 aaKnown RBP16.12■□□□□ 0.17
A1CF-204ENST00000373997 CASC1Q6TDU7 716 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 DZIP3Q86Y13 1208 aaKnown RBP16.12■□□□□ 0.17
A1CF-204ENST00000373997 NUTM1Q86Y26 1132 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 SIL1Q9H173 461 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 TBC1D2BQ9UPU7 963 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 COL15A1P39059 1388 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 GPTP24298 496 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
A1CF-204ENST00000373997 SEPT12Q8IYM1 358 aa16.12■□□□□ 0.17
A1CF-204ENST00000373997 QTRT2Q9H974 415 aaKnown RBP16.12■□□□□ 0.17
A1CF-204ENST00000373997 KCNA4P22459 653 aa16.11■□□□□ 0.17
A1CF-204ENST00000373997 KCNQ4P56696 695 aa16.11■□□□□ 0.17
A1CF-204ENST00000373997 CHMP3Q9Y3E7 222 aa16.11■□□□□ 0.17
A1CF-204ENST00000373997 NUCB2P80303 420 aa16.1■□□□□ 0.17
A1CF-204ENST00000373997 USP26Q9BXU7 913 aa16.1■□□□□ 0.17
A1CF-204ENST00000373997 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.177e-7■■□□□ 11.6
A1CF-204ENST00000373997 RABL6Q3YEC7 729 aaPredicted RBP16.1■□□□□ 0.17
A1CF-204ENST00000373997 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
A1CF-204ENST00000373997 SDSP20132 328 aa16.09■□□□□ 0.17
A1CF-204ENST00000373997 SSFA2P28290 1259 aa16.09■□□□□ 0.17
A1CF-204ENST00000373997 LMBR1LQ6UX01 489 aa16.09■□□□□ 0.17
A1CF-204ENST00000373997 ERC1Q8IUD2 1116 aa16.09■□□□□ 0.17
A1CF-204ENST00000373997 EIF5P55010 431 aaKnown RBP16.09■□□□□ 0.17
A1CF-204ENST00000373997 FOXO4P98177 505 aa16.09■□□□□ 0.17
A1CF-204ENST00000373997 KLHL40Q2TBA0 621 aa16.09■□□□□ 0.17
A1CF-204ENST00000373997 LINC00116Q8NCU8 138 aa16.09■□□□□ 0.17
A1CF-204ENST00000373997 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
A1CF-204ENST00000373997 BAG4O95429 457 aaKnown RBP16.08■□□□□ 0.16
A1CF-204ENST00000373997 HSP90AB3PQ58FF7 597 aa16.08■□□□□ 0.16
A1CF-204ENST00000373997 CWC22Q9HCG8 908 aaKnown RBP16.08■□□□□ 0.16
A1CF-204ENST00000373997 ONECUT3O60422 494 aaPredicted RBP16.07■□□□□ 0.16
A1CF-204ENST00000373997 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
A1CF-204ENST00000373997 GAS2L3Q86XJ1 694 aa16.07■□□□□ 0.16
A1CF-204ENST00000373997 FAM89AQ96GI7 184 aa16.07■□□□□ 0.16
A1CF-204ENST00000373997 CASZ1Q86V15 1759 aa16.07■□□□□ 0.16
A1CF-204ENST00000373997 REC8O95072 547 aa16.07■□□□□ 0.16
A1CF-204ENST00000373997 TRIM28Q13263 835 aaKnown RBP16.07■□□□□ 0.16
A1CF-204ENST00000373997 NLRP10Q86W26 655 aa16.07■□□□□ 0.16
A1CF-204ENST00000373997 CLASRPQ8N2M8 674 aaKnown RBP16.07■□□□□ 0.16
A1CF-204ENST00000373997 STAP2Q9UGK3 403 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms