RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 NRXN1Q9ULB1 1477 aa20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 BICDL1Q6ZP65 573 aa20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 SSH3Q8TE77 659 aa20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 TTC12Q9H892 705 aaPredicted RBP20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 GIGYF1O75420 1035 aaPredicted RBP20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 LRRFIP1Q32MZ4 808 aaKnown RBP20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 BEND3Q5T5X7 828 aa20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 EAF2Q96CJ1 260 aaPredicted RBP20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 TLR7Q9NYK1 1049 aaKnown RBP20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 NSFL1CQ9UNZ2 370 aaKnown RBP20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 UQCRHLA0A096LP55 91 aa20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ALDH1L1O75891 902 aa20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 UQCRHP07919 91 aa20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ANAPC15P60006 121 aa20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 RASSF8Q8NHQ8 419 aa20.91■□□□□ 0.94
TRAF3IP1-201ENST00000373327 TRIM29Q14134 588 aa20.9■□□□□ 0.94
TRAF3IP1-201ENST00000373327 SIRT1Q96EB6 747 aa20.9■□□□□ 0.94
TRAF3IP1-201ENST00000373327 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ADCY5O95622 1261 aa20.9■□□□□ 0.94
TRAF3IP1-201ENST00000373327 PIBF1Q8WXW3 757 aa20.9■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ADAMTS2O95450 1211 aa20.89■□□□□ 0.94
TRAF3IP1-201ENST00000373327 GPT2Q8TD30 523 aa20.89■□□□□ 0.94
TRAF3IP1-201ENST00000373327 NEK1Q96PY6 1258 aa20.89■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ADCK5Q3MIX3 580 aa20.89■□□□□ 0.93
TRAF3IP1-201ENST00000373327 SEC62Q99442 399 aaKnown RBP20.89■□□□□ 0.93
TRAF3IP1-201ENST00000373327 MYOM1P52179 1685 aa20.89■□□□□ 0.93
TRAF3IP1-201ENST00000373327 MROH1Q8NDA8 1641 aa20.89■□□□□ 0.93
TRAF3IP1-201ENST00000373327 F13A1P00488 732 aa20.89■□□□□ 0.93
TRAF3IP1-201ENST00000373327 CLCN1P35523 988 aa20.89■□□□□ 0.93
TRAF3IP1-201ENST00000373327 MAP3K11Q16584 847 aa20.89■□□□□ 0.93
TRAF3IP1-201ENST00000373327 ISM2Q6H9L7 571 aa20.89■□□□□ 0.93
TRAF3IP1-201ENST00000373327 MYO3AQ8NEV4 1616 aa20.89■□□□□ 0.93
TRAF3IP1-201ENST00000373327 FRMPD1Q5SYB0 1578 aa20.88■□□□□ 0.93
TRAF3IP1-201ENST00000373327 POLR3DP05423 398 aaPredicted RBP20.88■□□□□ 0.93
TRAF3IP1-201ENST00000373327 SH2B1Q9NRF2 756 aaPredicted RBP20.88■□□□□ 0.93
TRAF3IP1-201ENST00000373327 PES1O00541 588 aaKnown RBP20.88■□□□□ 0.93
TRAF3IP1-201ENST00000373327 HELBQ8NG08 1087 aaPredicted RBP20.88■□□□□ 0.93
TRAF3IP1-201ENST00000373327 IQSEC3Q9UPP2 1182 aaPredicted RBP20.88■□□□□ 0.93
TRAF3IP1-201ENST00000373327 IBTKQ9P2D0 1353 aaPredicted RBP20.87■□□□□ 0.93
TRAF3IP1-201ENST00000373327 Q6ZUG5 572 aa20.87■□□□□ 0.93
TRAF3IP1-201ENST00000373327 CWC25Q9NXE8 425 aaPredicted RBP20.87■□□□□ 0.93
TRAF3IP1-201ENST00000373327 C17orf53Q8N3J3 647 aaPredicted RBP20.87■□□□□ 0.93
TRAF3IP1-201ENST00000373327 CCDC171Q6TFL3 1326 aa20.87■□□□□ 0.93
TRAF3IP1-201ENST00000373327 AKAP17AQ02040 695 aaKnown RBP20.87■□□□□ 0.93
TRAF3IP1-201ENST00000373327 ABCF2Q9UG63 623 aa20.87■□□□□ 0.93
TRAF3IP1-201ENST00000373327 NUP133Q8WUM0 1156 aa20.86■□□□□ 0.93
TRAF3IP1-201ENST00000373327 VWDEQ8N2E2 1590 aa20.86■□□□□ 0.93
TRAF3IP1-201ENST00000373327 ZC3H13Q5T200 1668 aaKnown RBP20.86■□□□□ 0.93
TRAF3IP1-201ENST00000373327 TPM4P67936 248 aa20.86■□□□□ 0.93
TRAF3IP1-201ENST00000373327 C19orf44Q9H6X5 657 aa20.86■□□□□ 0.93
TRAF3IP1-201ENST00000373327 BIN1O00499 593 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 SMC2O95347 1197 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 TBC1D2BQ9UPU7 963 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 AXIN2Q9Y2T1 843 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 RAD50Q92878 1312 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 A0A0D9SFI3 127 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 KRT32Q14532 448 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 LDHAL6AQ6ZMR3 332 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 MPHOSPH8Q99549 860 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 TRMT112Q9UI30 125 aaKnown RBP20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 PLEKHG1Q9ULL1 1385 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 HSPA4P34932 840 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 UBE2HP62256 183 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 IFIT5Q13325 482 aaKnown RBP20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 FAM89AQ96GI7 184 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 DACT1Q9NYF0 836 aa20.85■□□□□ 0.93
TRAF3IP1-201ENST00000373327 CPSF1Q10570 1443 aaKnown RBP20.84■□□□□ 0.93
TRAF3IP1-201ENST00000373327 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
TRAF3IP1-201ENST00000373327 LETM1O95202 739 aaPredicted RBP20.84■□□□□ 0.93
TRAF3IP1-201ENST00000373327 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
TRAF3IP1-201ENST00000373327 CD163L1Q9NR16 1453 aa20.84■□□□□ 0.93
TRAF3IP1-201ENST00000373327 APOBRQ0VD83 1088 aa20.84■□□□□ 0.93
TRAF3IP1-201ENST00000373327 CCAR2Q8N163 923 aaKnown RBP20.84■□□□□ 0.93
TRAF3IP1-201ENST00000373327 TTC41PQ6P2S7 1318 aa20.83■□□□□ 0.93
TRAF3IP1-201ENST00000373327 NCOA5Q9HCD5 579 aaKnown RBP20.83■□□□□ 0.93
TRAF3IP1-201ENST00000373327 KIAA1210Q9ULL0 1709 aa20.83■□□□□ 0.92
TRAF3IP1-201ENST00000373327 FSD2A1L4K1 749 aa20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 RXRAP19793 462 aa20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 TPD52L1Q16890 204 aaPredicted RBP20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 SLC4A8Q2Y0W8 1093 aa20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 GCKRQ14397 625 aa20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 RUFY3Q7L099 469 aa20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 DEPDC5O75140 1603 aa20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 JAK2O60674 1132 aa20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 SLFNL1Q499Z3 407 aa20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 U3KPZ7 1027 aaPredicted RBP20.82■□□□□ 0.92
TRAF3IP1-201ENST00000373327 HOMER1Q86YM7 354 aa20.81■□□□□ 0.92
TRAF3IP1-201ENST00000373327 SLC27A2O14975 620 aa20.81■□□□□ 0.92
TRAF3IP1-201ENST00000373327 IL25Q9H293 177 aa20.81■□□□□ 0.92
TRAF3IP1-201ENST00000373327 RAD21O60216 631 aa20.81■□□□□ 0.92
TRAF3IP1-201ENST00000373327 LARGE1O95461 756 aa20.81■□□□□ 0.92
TRAF3IP1-201ENST00000373327 BRD1O95696 1058 aa20.81■□□□□ 0.92
TRAF3IP1-201ENST00000373327 ME3Q16798 604 aa20.81■□□□□ 0.92
TRAF3IP1-201ENST00000373327 SLC52A2Q9HAB3 445 aa20.81■□□□□ 0.92
TRAF3IP1-201ENST00000373327 CDK11BP21127 795 aaKnown RBP20.8■□□□□ 0.92
TRAF3IP1-201ENST00000373327 IMMTQ16891 758 aaKnown RBP20.8■□□□□ 0.92
TRAF3IP1-201ENST00000373327 PPLO60437 1756 aa20.8■□□□□ 0.92
TRAF3IP1-201ENST00000373327 CLTCQ00610 1675 aaKnown RBP20.8■□□□□ 0.92
TRAF3IP1-201ENST00000373327 GOLGA8BA8MQT2 603 aa20.8■□□□□ 0.92
TRAF3IP1-201ENST00000373327 TTLL7Q6ZT98 887 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms