RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PTPRMP28827 1452 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 NLRP1Q9C000 1473 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 LRRC7Q96NW7 1537 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 LDHAL6AQ6ZMR3 332 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 NUP133Q8WUM0 1156 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 CFAP45Q9UL16 551 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 CAMSAP1Q5T5Y3 1602 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 NEXMIFQ5QGS0 1516 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 G3V3G9 751 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 SGSM2O43147 1006 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 DCAF8Q5TAQ9 597 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 CREB3L3Q68CJ9 461 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 LRSAM1Q6UWE0 723 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 SSH3Q8TE77 659 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 ABCF2Q9UG63 623 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 AKAP2Q9Y2D5 859 aa9.98□□□□□ -0.81
PTPRK-206ENST00000368215 DIP2CQ9Y2E4 1556 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 GIGYF1O75420 1035 aaPredicted RBP9.97□□□□□ -0.81
PTPRK-206ENST00000368215 HOXB7P09629 217 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 SART3Q15020 963 aaKnown RBP9.97□□□□□ -0.81
PTPRK-206ENST00000368215 AIDAQ96BJ3 306 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 EDC3Q96F86 508 aaKnown RBP9.97□□□□□ -0.81
PTPRK-206ENST00000368215 SNX14Q9Y5W7 946 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 SMC2O95347 1197 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 CCDC82Q8N4S0 544 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 DCAF5Q96JK2 942 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 SCAND2PQ9GZW5 306 aaPredicted RBP9.97□□□□□ -0.81
PTPRK-206ENST00000368215 ARHGEF40Q8TER5 1519 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 RAD21O60216 631 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 TIMM10P62072 90 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 HSP90AB3PQ58FF7 597 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 VSIG10Q8N0Z9 540 aa9.97□□□□□ -0.81
PTPRK-206ENST00000368215 ADGRB1O14514 1584 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 PTCH1Q13635 1447 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 SYT1P21579 422 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 TDO2P48775 406 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 UBE2HP62256 183 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 BEND3Q5T5X7 828 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 CCDC129Q6ZRS4 1044 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 CHST3Q7LGC8 479 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 HOMER1Q86YM7 354 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 NRXN1Q9ULB1 1477 aa9.96□□□□□ -0.81
PTPRK-206ENST00000368215 F13A1P00488 732 aa9.96□□□□□ -0.82
PTPRK-206ENST00000368215 ZSCAN25Q6NSZ9 544 aa9.96□□□□□ -0.82
PTPRK-206ENST00000368215 NAT10Q9H0A0 1025 aaKnown RBP9.96□□□□□ -0.82
PTPRK-206ENST00000368215 LRP2BPQ9P2M1 347 aa9.96□□□□□ -0.82
PTPRK-206ENST00000368215 RRAGDQ9NQL2 400 aaPredicted RBP9.96□□□□□ -0.82
PTPRK-206ENST00000368215 USP16Q9Y5T5 823 aa9.96□□□□□ -0.82
PTPRK-206ENST00000368215 CCDC171Q6TFL3 1326 aa9.96□□□□□ -0.82
PTPRK-206ENST00000368215 PIP4K2BP78356 416 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 FILIP1Q7Z7B0 1213 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 DBNDD2Q9BQY9 259 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 SLC52A2Q9HAB3 445 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 A1BGP04217 495 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 Q6ZUG5 572 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 INTS4Q96HW7 963 aaKnown RBP9.95□□□□□ -0.82
PTPRK-206ENST00000368215 ZNF830Q96NB3 372 aaPredicted RBP9.95□□□□□ -0.82
PTPRK-206ENST00000368215 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 FAM173BQ6P4H8 233 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 CCAR2Q8N163 923 aaKnown RBP9.95□□□□□ -0.82
PTPRK-206ENST00000368215 NOL10Q9BSC4 688 aaKnown RBP9.95□□□□□ -0.82
PTPRK-206ENST00000368215 RAI14Q9P0K7 980 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 HMG20BQ9P0W2 317 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 IBTKQ9P2D0 1353 aaPredicted RBP9.95□□□□□ -0.82
PTPRK-206ENST00000368215 ZNF213O14771 459 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 MCMDC2Q4G0Z9 681 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 CCDC144CPQ8IYA2 1237 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 METTL22Q9BUU2 404 aaPredicted RBP9.95□□□□□ -0.82
PTPRK-206ENST00000368215 NACAP1Q9BZK3 213 aa9.95□□□□□ -0.82
PTPRK-206ENST00000368215 RAD50Q92878 1312 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 ANKRD18BA2A2Z9 1011 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 GOLGA8BA8MQT2 603 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 ADCY5O95622 1261 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 ZNF594Q96JF6 807 aaPredicted RBP9.94□□□□□ -0.82
PTPRK-206ENST00000368215 TMX4Q9H1E5 349 aaPredicted RBP9.94□□□□□ -0.82
PTPRK-206ENST00000368215 RBSNQ9H1K0 784 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 LMBRD1Q9NUN5 540 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 MROH2AA6NES4 1674 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 EXOC5O00471 708 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 PIBF1Q8WXW3 757 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 C8orf76Q96K31 380 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 SETD1BQ9UPS6 1966 aaKnown RBP9.94□□□□□ -0.82
PTPRK-206ENST00000368215 UQCRHLA0A096LP55 91 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 MARCH6O60337 910 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 POLR3DP05423 398 aaPredicted RBP9.94□□□□□ -0.82
PTPRK-206ENST00000368215 UQCRHP07919 91 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 GCKRQ14397 625 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 RUFY3Q7L099 469 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 GAS2L3Q86XJ1 694 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 IQSEC2Q5JU85 1478 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 TPM2P07951 284 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 HMGB1P09429 215 aaKnown RBP9.94□□□□□ -0.82
PTPRK-206ENST00000368215 HSPA4P34932 840 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 IGHMBP2P38935 993 aaKnown RBP9.94□□□□□ -0.82
PTPRK-206ENST00000368215 EAF2Q96CJ1 260 aaPredicted RBP9.94□□□□□ -0.82
PTPRK-206ENST00000368215 PAG1Q9NWQ8 432 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 PIK3C2BO00750 1634 aa9.94□□□□□ -0.82
PTPRK-206ENST00000368215 MINDY4BA8MYZ0 360 aa9.93□□□□□ -0.82
PTPRK-206ENST00000368215 IL2RBP14784 551 aa9.93□□□□□ -0.82
PTPRK-206ENST00000368215 PTH1RQ03431 593 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms