RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PLEKHG3A1L390 1219 aa16.19■□□□□ 0.18
PRKN-205ENST00000366897 NAA30Q147X3 362 aaPredicted RBP16.19■□□□□ 0.18
PRKN-205ENST00000366897 CCDC186Q7Z3E2 898 aa16.19■□□□□ 0.18
PRKN-205ENST00000366897 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
PRKN-205ENST00000366897 TECPR2O15040 1411 aa16.19■□□□□ 0.18
PRKN-205ENST00000366897 DACT1Q9NYF0 836 aa16.18■□□□□ 0.18
PRKN-205ENST00000366897 TYRO3Q06418 890 aa16.18■□□□□ 0.18
PRKN-205ENST00000366897 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
PRKN-205ENST00000366897 USP31Q70CQ4 1352 aa16.18■□□□□ 0.18
PRKN-205ENST00000366897 DMTNQ08495 405 aa16.17■□□□□ 0.18
PRKN-205ENST00000366897 CHAF1AQ13111 956 aaPredicted RBP16.17■□□□□ 0.18
PRKN-205ENST00000366897 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
PRKN-205ENST00000366897 BRINP3Q76B58 766 aa16.17■□□□□ 0.18
PRKN-205ENST00000366897 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
PRKN-205ENST00000366897 LGR6Q9HBX8 967 aa16.17■□□□□ 0.18
PRKN-205ENST00000366897 RBM8AQ9Y5S9 174 aaKnown RBP16.17■□□□□ 0.18
PRKN-205ENST00000366897 SBNO1A3KN83 1393 aa16.17■□□□□ 0.18
PRKN-205ENST00000366897 KDRP35968 1356 aa16.17■□□□□ 0.18
PRKN-205ENST00000366897 RGPD1P0DJD0 1748 aa16.17■□□□□ 0.18
PRKN-205ENST00000366897 MST1RQ04912 1400 aa16.17■□□□□ 0.18
PRKN-205ENST00000366897 GLRX3O76003 335 aaKnown RBP16.16■□□□□ 0.18
PRKN-205ENST00000366897 MAP3K11Q16584 847 aa16.16■□□□□ 0.18
PRKN-205ENST00000366897 VPS53Q5VIR6 699 aa16.16■□□□□ 0.18
PRKN-205ENST00000366897 DNAAF4Q8WXU2 420 aa16.16■□□□□ 0.18
PRKN-205ENST00000366897 ZSWIM6Q9HCJ5 1215 aa16.16■□□□□ 0.18
PRKN-205ENST00000366897 BEND3Q5T5X7 828 aa16.16■□□□□ 0.18
PRKN-205ENST00000366897 CLASRPQ8N2M8 674 aaKnown RBP16.16■□□□□ 0.18
PRKN-205ENST00000366897 FAM200AQ8TCP9 573 aa16.16■□□□□ 0.18
PRKN-205ENST00000366897 CCDC8Q9H0W5 538 aaPredicted RBP16.16■□□□□ 0.18
PRKN-205ENST00000366897 CBX8Q9HC52 389 aa16.16■□□□□ 0.18
PRKN-205ENST00000366897 FOSBP53539 338 aa16.15■□□□□ 0.18
PRKN-205ENST00000366897 KRT85P78386 507 aa16.15■□□□□ 0.18
PRKN-205ENST00000366897 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
PRKN-205ENST00000366897 AACSQ86V21 672 aa16.15■□□□□ 0.18
PRKN-205ENST00000366897 DDX11Q96FC9 970 aa16.15■□□□□ 0.18
PRKN-205ENST00000366897 TRIM5Q9C035 493 aa16.15■□□□□ 0.18
PRKN-205ENST00000366897 TNMDQ9H2S6 317 aa16.15■□□□□ 0.18
PRKN-205ENST00000366897 MAP3K5Q99683 1374 aa16.15■□□□□ 0.18
PRKN-205ENST00000366897 A0A087WWV3 80 aa16.15■□□□□ 0.18
PRKN-205ENST00000366897 IFIT2P09913 472 aaKnown RBP16.15■□□□□ 0.18
PRKN-205ENST00000366897 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
PRKN-205ENST00000366897 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.17
PRKN-205ENST00000366897 HOXC9P31274 260 aa16.14■□□□□ 0.17
PRKN-205ENST00000366897 NMIQ13287 307 aaPredicted RBP16.14■□□□□ 0.17
PRKN-205ENST00000366897 LARP1Q6PKG0 1096 aaKnown RBP16.14■□□□□ 0.17
PRKN-205ENST00000366897 SIL1Q9H173 461 aa16.14■□□□□ 0.17
PRKN-205ENST00000366897 CCDC171Q6TFL3 1326 aa16.14■□□□□ 0.17
PRKN-205ENST00000366897 CEBPZQ03701 1054 aaKnown RBP16.14■□□□□ 0.17
PRKN-205ENST00000366897 NECTIN1Q15223 517 aa16.14■□□□□ 0.17
PRKN-205ENST00000366897 RUFY2Q8WXA3 655 aa16.14■□□□□ 0.17
PRKN-205ENST00000366897 ECHDC1Q9NTX5 307 aa16.14■□□□□ 0.17
PRKN-205ENST00000366897 TLR7Q9NYK1 1049 aaKnown RBP16.14■□□□□ 0.17
PRKN-205ENST00000366897 FAM208AQ9UK61 1670 aaKnown RBP16.14■□□□□ 0.17
PRKN-205ENST00000366897 GOLGA6L6A8MZA4 724 aa16.13■□□□□ 0.17
PRKN-205ENST00000366897 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
PRKN-205ENST00000366897 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
PRKN-205ENST00000366897 SIRT1Q96EB6 747 aa16.13■□□□□ 0.17
PRKN-205ENST00000366897 EDC3Q96F86 508 aaKnown RBP16.13■□□□□ 0.17
PRKN-205ENST00000366897 DNAJC25Q9H1X3 360 aa16.13■□□□□ 0.17
PRKN-205ENST00000366897 EPB41L2O43491 1005 aaKnown RBP16.13■□□□□ 0.17
PRKN-205ENST00000366897 ZNF592Q92610 1267 aa16.13■□□□□ 0.17
PRKN-205ENST00000366897 SH2B1Q9NRF2 756 aaPredicted RBP16.13■□□□□ 0.17
PRKN-205ENST00000366897 A0A0D9SFI3 127 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 NR1I2O75469 434 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 PROSER3Q2NL68 480 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 BOLA2Q9H3K6 86 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 C9orf78Q9NZ63 289 aaPredicted RBP16.12■□□□□ 0.17
PRKN-205ENST00000366897 JAK2O60674 1132 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 ZSCAN31Q96LW9 406 aaPredicted RBP16.12■□□□□ 0.17
PRKN-205ENST00000366897 ORAI2Q96SN7 254 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 C1orf167Q5SNV9 1468 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 CHGBP05060 677 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 BICD2Q8TD16 824 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
PRKN-205ENST00000366897 NDUFB9Q9Y6M9 179 aa16.12■□□□□ 0.17
PRKN-205ENST00000366897 PRAMEF22A3QJZ6 481 aa16.11■□□□□ 0.17
PRKN-205ENST00000366897 SLC27A2O14975 620 aa16.11■□□□□ 0.17
PRKN-205ENST00000366897 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
PRKN-205ENST00000366897 EIF4A1P60842 406 aaKnown RBP16.11■□□□□ 0.17
PRKN-205ENST00000366897 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
PRKN-205ENST00000366897 CCDC144BQ3MJ40 725 aa16.11■□□□□ 0.17
PRKN-205ENST00000366897 CCDC144CPQ8IYA2 1237 aa16.11■□□□□ 0.17
PRKN-205ENST00000366897 FBXW7Q969H0 707 aa16.11■□□□□ 0.17
PRKN-205ENST00000366897 EAF2Q96CJ1 260 aaPredicted RBP16.1■□□□□ 0.17
PRKN-205ENST00000366897 MAP3K2Q9Y2U5 619 aa16.1■□□□□ 0.17
PRKN-205ENST00000366897 TTC41PQ6P2S7 1318 aa16.1■□□□□ 0.17
PRKN-205ENST00000366897 PHLPP1O60346 1717 aa16.1■□□□□ 0.17
PRKN-205ENST00000366897 TNNT1P13805 278 aa16.1■□□□□ 0.17
PRKN-205ENST00000366897 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
PRKN-205ENST00000366897 CACTINQ8WUQ7 758 aaKnown RBP16.1■□□□□ 0.17
PRKN-205ENST00000366897 LEO1Q8WVC0 666 aaPredicted RBP16.1■□□□□ 0.17
PRKN-205ENST00000366897 ANKRD7Q92527 254 aa16.1■□□□□ 0.17
PRKN-205ENST00000366897 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.1■□□□□ 0.17
PRKN-205ENST00000366897 V9GYY5 206 aaPredicted RBP16.1■□□□□ 0.17
PRKN-205ENST00000366897 ADCY9O60503 1353 aa16.1■□□□□ 0.17
PRKN-205ENST00000366897 ZSCAN25Q6NSZ9 544 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 BLOC1S2Q6QNY1 142 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms