RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 ATF7IPQ6VMQ6 1270 aa8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 SMC1BQ8NDV3 1235 aa8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 ARHGAP45Q92619 1136 aa8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 API5Q9BZZ5 524 aaKnown RBP8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 DDX21Q9NR30 783 aaKnown RBP eCLIP8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 HYPKQ9NX55 129 aa8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 NOB1Q9ULX3 412 aaKnown RBP8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 ZNF831Q5JPB2 1677 aa8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 CACNA1FO60840 1977 aa8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 H0YIN7 160 aa8.6□□□□□ -1.03
RNU1-55P-201ENST00000365510 PLIN1O60240 522 aa8.6□□□□□ -1.03
RNU1-55P-201ENST00000365510 TRIM27P14373 513 aa8.6□□□□□ -1.03
RNU1-55P-201ENST00000365510 EIF5P55010 431 aaKnown RBP8.6□□□□□ -1.03
RNU1-55P-201ENST00000365510 FLIIQ13045 1269 aa8.6□□□□□ -1.03
RNU1-55P-201ENST00000365510 PRR5LQ6MZQ0 368 aa8.6□□□□□ -1.03
RNU1-55P-201ENST00000365510 USP16Q9Y5T5 823 aa8.6□□□□□ -1.03
RNU1-55P-201ENST00000365510 DDX58O95786 925 aaKnown RBP8.59□□□□□ -1.03
RNU1-55P-201ENST00000365510 FMR1Q06787 632 aaKnown RBP eCLIP8.59□□□□□ -1.03
RNU1-55P-201ENST00000365510 FKBP5Q13451 457 aaPredicted RBP8.59□□□□□ -1.03
RNU1-55P-201ENST00000365510 PDE3AQ14432 1141 aa8.59□□□□□ -1.03
RNU1-55P-201ENST00000365510 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
RNU1-55P-201ENST00000365510 NPM2Q86SE8 214 aaKnown RBP8.59□□□□□ -1.03
RNU1-55P-201ENST00000365510 COL15A1P39059 1388 aa8.59□□□□□ -1.03
RNU1-55P-201ENST00000365510 ABCC4O15439 1325 aa8.58□□□□□ -1.04
RNU1-55P-201ENST00000365510 ANXA1P04083 346 aa8.58□□□□□ -1.04
RNU1-55P-201ENST00000365510 MYL6BP14649 208 aa8.58□□□□□ -1.04
RNU1-55P-201ENST00000365510 PROSER3Q2NL68 480 aa8.58□□□□□ -1.04
RNU1-55P-201ENST00000365510 DZIP1LQ8IYY4 767 aaKnown RBP8.58□□□□□ -1.04
RNU1-55P-201ENST00000365510 PCNTO95613 3336 aa8.58□□□□□ -1.04
RNU1-55P-201ENST00000365510 SLX4Q8IY92 1834 aa8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 FOXN1O15353 648 aa8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 IRX6P78412 446 aaPredicted RBP8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 PDIA6Q15084 440 aa8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 KIF6Q6ZMV9 814 aa8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 G2E3Q7L622 706 aa8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 ITPRIPQ8IWB1 547 aa8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 PHAXQ9H814 394 aaKnown RBP8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 ANKRD31Q8N7Z5 1873 aa8.57□□□□□ -1.04
RNU1-55P-201ENST00000365510 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 CAMTA2O94983 1202 aa8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 IL6STP40189 918 aaPredicted RBP8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 AIMP1Q12904 312 aaKnown RBP8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 MVPQ14764 893 aaKnown RBP8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 C20orf194Q5TEA3 1177 aa8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 ERICH6BQ5W0A0 696 aa8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 NBPF10Q6P3W6 841 aaKnown RBP8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 LRP10Q7Z4F1 713 aa8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 PANK1Q8TE04 598 aa8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 CHMP4BQ9H444 224 aaKnown RBP8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 ZNF277Q9NRM2 450 aaPredicted RBP8.56□□□□□ -1.04
RNU1-55P-201ENST00000365510 PI4KAP2A4QPH2 592 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 F6X3S4 739 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 RLBP1P12271 317 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 CCT4P50991 539 aaKnown RBP8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 HLFQ16534 295 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 CHADLQ6NUI6 762 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 SLC4A10Q6U841 1118 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 KSR2Q6VAB6 950 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 COPS6Q7L5N1 327 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 TMEM57Q8N5G2 664 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 PI4KAP1Q8N8J0 262 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 DNAAF4Q8WXU2 420 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 CRBNQ96SW2 442 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 BRIP1Q9BX63 1249 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 DDX19BQ9UMR2 479 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 TNNQ9UQP3 1299 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 MAP3K2Q9Y2U5 619 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 COG6Q9Y2V7 657 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 CACNA1SQ13698 1873 aa8.55□□□□□ -1.04
RNU1-55P-201ENST00000365510 ZNF541Q9H0D2 1346 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 A0A087WZG4 1122 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 SRGNP10124 158 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 VEGFBP49765 207 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 NEXNQ0ZGT2 675 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 EAPPQ56P03 285 aaPredicted RBP8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 MAP1SQ66K74 1059 aaPredicted RBP8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 DPY19L2Q6NUT2 758 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 PRPF40BQ6NWY9 871 aaKnown RBP8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 ANKRD13DQ6ZTN6 518 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 DZIP3Q86Y13 1208 aaKnown RBP8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 C7orf43Q8WVR3 580 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 CLEC11AQ9Y240 323 aa8.54□□□□□ -1.04
RNU1-55P-201ENST00000365510 NPHP1O15259 732 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 ITGBL1O95965 494 aaPredicted RBP8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 PDE6BP35913 854 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 AAMPQ13685 434 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 INTS3Q68E01 1043 aaKnown RBP8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 TTLL7Q6ZT98 887 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 SRCIN1Q9C0H9 1055 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 TAOK3Q9H2K8 898 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 TAF1DQ9H5J8 278 aaPredicted RBP8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
RNU1-55P-201ENST00000365510 NRXN2Q9P2S2 1712 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms