RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 METTL22Q9BUU2 404 aaPredicted RBP13.3□□□□□ -0.28
SSU72-202ENST00000359060 CWC25Q9NXE8 425 aaPredicted RBP13.3□□□□□ -0.28
SSU72-202ENST00000359060 ERBB3P21860 1342 aa13.3□□□□□ -0.28
SSU72-202ENST00000359060 IFIT1P09914 478 aaKnown RBP13.3□□□□□ -0.28
SSU72-202ENST00000359060 ZSCAN22P10073 491 aaPredicted RBP13.3□□□□□ -0.28
SSU72-202ENST00000359060 PHKG2P15735 406 aa13.3□□□□□ -0.28
SSU72-202ENST00000359060 PTH1RQ03431 593 aa13.3□□□□□ -0.28
SSU72-202ENST00000359060 FBXW7Q969H0 707 aa13.3□□□□□ -0.28
SSU72-202ENST00000359060 CNNM1Q9NRU3 951 aa13.3□□□□□ -0.28
SSU72-202ENST00000359060 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
SSU72-202ENST00000359060 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
SSU72-202ENST00000359060 REREQ9P2R6 1566 aa13.3□□□□□ -0.28
SSU72-202ENST00000359060 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
SSU72-202ENST00000359060 CCDC171Q6TFL3 1326 aa13.29□□□□□ -0.28
SSU72-202ENST00000359060 RALYLQ86SE5 291 aaKnown RBP13.29□□□□□ -0.28
SSU72-202ENST00000359060 FSD2A1L4K1 749 aa13.29□□□□□ -0.28
SSU72-202ENST00000359060 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
SSU72-202ENST00000359060 NEURL1BA8MQ27 555 aa13.29□□□□□ -0.28
SSU72-202ENST00000359060 A1BGP04217 495 aa13.29□□□□□ -0.28
SSU72-202ENST00000359060 SYT1P21579 422 aa13.29□□□□□ -0.28
SSU72-202ENST00000359060 KRT32Q14532 448 aa13.29□□□□□ -0.28
SSU72-202ENST00000359060 TRDNQ13061 729 aa13.28□□□□□ -0.28
SSU72-202ENST00000359060 POLA2Q14181 598 aa13.28□□□□□ -0.28
SSU72-202ENST00000359060 DBNDD2Q9BQY9 259 aa13.28□□□□□ -0.28
SSU72-202ENST00000359060 CAMK4Q16566 473 aa13.28□□□□□ -0.28
SSU72-202ENST00000359060 GLIPR1L2Q4G1C9 344 aa13.28□□□□□ -0.28
SSU72-202ENST00000359060 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
SSU72-202ENST00000359060 PI4K2BQ8TCG2 481 aa13.28□□□□□ -0.28
SSU72-202ENST00000359060 R3HCC1Q9Y3T6 440 aaKnown RBP13.28□□□□□ -0.28
SSU72-202ENST00000359060 TIMM10P62072 90 aa13.28□□□□□ -0.28
SSU72-202ENST00000359060 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
SSU72-202ENST00000359060 TLR7Q9NYK1 1049 aaKnown RBP13.28□□□□□ -0.28
SSU72-202ENST00000359060 RGS12O14924 1447 aa13.27□□□□□ -0.28
SSU72-202ENST00000359060 DNM1Q05193 864 aaKnown RBP13.27□□□□□ -0.28
SSU72-202ENST00000359060 SPATA32Q96LK8 384 aa13.27□□□□□ -0.28
SSU72-202ENST00000359060 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.28
SSU72-202ENST00000359060 NRKQ7Z2Y5 1582 aa13.27□□□□□ -0.29
SSU72-202ENST00000359060 TMEM94Q12767 1356 aa13.27□□□□□ -0.29
SSU72-202ENST00000359060 CCDC129Q6ZRS4 1044 aa13.27□□□□□ -0.29
SSU72-202ENST00000359060 RBSNQ9H1K0 784 aa13.27□□□□□ -0.29
SSU72-202ENST00000359060 BRD1O95696 1058 aa13.27□□□□□ -0.29
SSU72-202ENST00000359060 TMEM63CQ9P1W3 806 aa13.27□□□□□ -0.29
SSU72-202ENST00000359060 NEK1Q96PY6 1258 aa13.26□□□□□ -0.29
SSU72-202ENST00000359060 ADGRL3Q9HAR2 1447 aa13.26□□□□□ -0.29
SSU72-202ENST00000359060 STARD3NLO95772 234 aa13.26□□□□□ -0.29
SSU72-202ENST00000359060 CCT2P78371 535 aaKnown RBP13.26□□□□□ -0.29
SSU72-202ENST00000359060 SASS6Q6UVJ0 657 aa13.26□□□□□ -0.29
SSU72-202ENST00000359060 GADD45BO75293 160 aaPredicted RBP13.26□□□□□ -0.29
SSU72-202ENST00000359060 F13A1P00488 732 aa13.26□□□□□ -0.29
SSU72-202ENST00000359060 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
SSU72-202ENST00000359060 CCDC183Q5T5S1 534 aa13.26□□□□□ -0.29
SSU72-202ENST00000359060 LSG1Q9H089 658 aaKnown RBP13.26□□□□□ -0.29
SSU72-202ENST00000359060 GUCY1B3Q02153 619 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 ADCK5Q3MIX3 580 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 RUFY3Q7L099 469 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 SPC24Q8NBT2 197 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 BRF1Q92994 677 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 USP25Q9UHP3 1055 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 BECN2A8MW95 431 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 GOLGA6L6A8MZA4 724 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 LETM1O95202 739 aaPredicted RBP13.25□□□□□ -0.29
SSU72-202ENST00000359060 ZNF594Q96JF6 807 aaPredicted RBP13.25□□□□□ -0.29
SSU72-202ENST00000359060 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
SSU72-202ENST00000359060 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
SSU72-202ENST00000359060 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 HAND2P61296 217 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 CHAF1AQ13111 956 aaPredicted RBP13.25□□□□□ -0.29
SSU72-202ENST00000359060 IFIT5Q13325 482 aaKnown RBP13.25□□□□□ -0.29
SSU72-202ENST00000359060 TNNI3KQ59H18 835 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 FAM173BQ6P4H8 233 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 GIMAP6Q6P9H5 292 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 GPT2Q8TD30 523 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 FPGT-TNNI3KV9GXZ4 949 aa13.25□□□□□ -0.29
SSU72-202ENST00000359060 IDH1O75874 414 aaKnown RBP13.24□□□□□ -0.29
SSU72-202ENST00000359060 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
SSU72-202ENST00000359060 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.24□□□□□ -0.29
SSU72-202ENST00000359060 CCDC73Q6ZRK6 1079 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 ADCY9O60503 1353 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 SASH1O94885 1247 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 IL2RBP14784 551 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 NFXL1Q6ZNB6 911 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 IL25Q9H293 177 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 TNMDQ9H2S6 317 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 SLC27A2O14975 620 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 CCDC192P0DO97 292 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 UBE2HP62256 183 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 PLBD2Q8NHP8 589 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 NUP62CLQ9H1M0 184 aa13.24□□□□□ -0.29
SSU72-202ENST00000359060 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
SSU72-202ENST00000359060 IGKV5-2P06315 115 aa13.23□□□□□ -0.29
SSU72-202ENST00000359060 CKAP2LQ8IYA6 745 aa13.23□□□□□ -0.29
SSU72-202ENST00000359060 CLCN1P35523 988 aa13.23□□□□□ -0.29
SSU72-202ENST00000359060 MCMDC2Q4G0Z9 681 aa13.23□□□□□ -0.29
SSU72-202ENST00000359060 CPLX2Q6PUV4 134 aaKnown RBP13.23□□□□□ -0.29
SSU72-202ENST00000359060 HMG20BQ9P0W2 317 aa13.23□□□□□ -0.29
SSU72-202ENST00000359060 UBR1Q8IWV7 1749 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms