RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ZNF213O14771 459 aa13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 SMARCA5O60264 1052 aaPredicted RBP13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 KIAA1107Q9UPP5 1409 aa13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 GBP6Q6ZN66 633 aa13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 CABP1Q9NZU7 370 aa13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 CFAP58Q5T655 872 aa13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 CKAP2LQ8IYA6 745 aa13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 BIN1O00499 593 aa13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 IFIT1P09914 478 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
SPTBN1-202ENST00000356805 GOLGA8BA8MQT2 603 aa13.15□□□□□ -0.31
SPTBN1-202ENST00000356805 SH3BP5O60239 455 aa13.15□□□□□ -0.31
SPTBN1-202ENST00000356805 CAPN2P17655 700 aa13.15□□□□□ -0.31
SPTBN1-202ENST00000356805 CCDC50Q8IVM0 306 aa13.15□□□□□ -0.31
SPTBN1-202ENST00000356805 FBF1Q8TES7 1133 aa13.15□□□□□ -0.31
SPTBN1-202ENST00000356805 LRRC45Q96CN5 670 aa13.15□□□□□ -0.31
SPTBN1-202ENST00000356805 GNAT3A8MTJ3 354 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 ODF2LQ9ULJ1 636 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 SSFA2P28290 1259 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 MAP3K12Q12852 859 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 CCDC63Q8NA47 563 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 MYD88Q99836 296 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 WDR66Q8TBY9 1149 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 TTC14Q96N46 770 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 LARP6Q9BRS8 491 aaKnown RBP13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 DPH6Q7L8W6 267 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 TBC1D5Q92609 795 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 SLC5A1P13866 664 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 IQCGQ9H095 443 aaKnown RBP13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 ZSCAN16Q9H4T2 348 aaPredicted RBP13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 SH3BGRP55822 239 aaPredicted RBP13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
SPTBN1-202ENST00000356805 AMPD3Q01432 767 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 IFI16Q16666 785 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 B4GALNT4Q76KP1 1039 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 CCDC6Q16204 474 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 UTP14AQ9BVJ6 771 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 NDC80O14777 642 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 NBPF11Q86T75 865 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 NAP1L3Q99457 506 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 CLGNO14967 610 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 GOLGA1Q92805 767 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 CTAGE1Q96RT6 745 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 TUBB2AQ13885 445 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 TUBB2BQ9BVA1 445 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 TCP11L1Q9NUJ3 509 aa13.13□□□□□ -0.31
SPTBN1-202ENST00000356805 KIAA0753Q2KHM9 967 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 SLF2Q8IX21 1173 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.12□□□□□ -0.315e-7■■□□□ 11.6
SPTBN1-202ENST00000356805 CTAGE15A4D2H0 777 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 CTAGE8P0CG41 777 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 IFIT5Q13325 482 aaKnown RBP13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 STXBP4Q6ZWJ1 553 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 CTAGE6Q86UF2 777 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 CTAGE4Q8IX94 777 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 ZSWIM4Q9H7M6 989 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 RSPH14Q9UHP6 348 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 ERBINQ96RT1 1412 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 STX6O43752 255 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 GNG11P61952 73 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 ANKRD30BQ9BXX2 1392 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 IDEP14735 1019 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 MX1P20591 662 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 CCDC155Q8N6L0 562 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 TMEM110-MUSTN1A8MSY1 372 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 MPRIPQ6WCQ1 1025 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 ECM2O94769 699 aaPredicted RBP13.12□□□□□ -0.31
SPTBN1-202ENST00000356805 SEPT6Q14141 434 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 MAP7D1Q3KQU3 841 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 KIF1BPQ96EK5 621 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 PANK2Q9BZ23 570 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 CCDC121Q6ZUS5 278 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 GSTA5Q7RTV2 222 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 FSIP1Q8NA03 581 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 MPHOSPH6Q99547 160 aaKnown RBP13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 TPD52P55327 224 aaPredicted RBP13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 SWAP70Q9UH65 585 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 SKILP12757 684 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 CCDC12Q8WUD4 166 aaPredicted RBP13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 KIF4AO95239 1232 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
SPTBN1-202ENST00000356805 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 FCHSD2O94868 740 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms