RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MYO7AQ13402 2215 aa7.22□□□□□ -1.25
CD47-201ENST00000355354 RBM10P98175 930 aaKnown RBP7.22□□□□□ -1.25
CD47-201ENST00000355354 SLC4A9Q96Q91 983 aa7.22□□□□□ -1.25
CD47-201ENST00000355354 NPC1L1Q9UHC9 1359 aa7.22□□□□□ -1.25
CD47-201ENST00000355354 TBC1D9Q6ZT07 1266 aa7.22□□□□□ -1.25
CD47-201ENST00000355354 TNPO1Q92973 898 aaKnown RBP7.22□□□□□ -1.25
CD47-201ENST00000355354 ADCK5Q3MIX3 580 aa7.21□□□□□ -1.25
CD47-201ENST00000355354 RSPH6AQ9H0K4 717 aa7.21□□□□□ -1.25
CD47-201ENST00000355354 NBPF7P0C2Y1 421 aaPredicted RBP7.21□□□□□ -1.26
CD47-201ENST00000355354 ARID5BQ14865 1188 aa7.21□□□□□ -1.26
CD47-201ENST00000355354 NKRFO15226 690 aaKnown RBP eCLIP7.21□□□□□ -1.26
CD47-201ENST00000355354 KCNA3P22001 575 aa7.21□□□□□ -1.26
CD47-201ENST00000355354 HOXC9P31274 260 aa7.21□□□□□ -1.26
CD47-201ENST00000355354 R3HDM1Q15032 1099 aaKnown RBP7.21□□□□□ -1.26
CD47-201ENST00000355354 SLC15A2Q16348 729 aa7.21□□□□□ -1.26
CD47-201ENST00000355354 SDK1Q7Z5N4 2213 aa7.21□□□□□ -1.26
CD47-201ENST00000355354 KNSTRNQ9Y448 316 aa7.21□□□□□ -1.26
CD47-201ENST00000355354 IL1RAPL2Q9NP60 686 aa7.2□□□□□ -1.26
CD47-201ENST00000355354 C14orf37Q86TY3 774 aa7.2□□□□□ -1.26
CD47-201ENST00000355354 RNF214Q8ND24 703 aa7.2□□□□□ -1.26
CD47-201ENST00000355354 LRRN4CLQ8ND94 238 aa7.2□□□□□ -1.26
CD47-201ENST00000355354 RBSNQ9H1K0 784 aa7.2□□□□□ -1.26
CD47-201ENST00000355354 EVC2Q86UK5 1308 aa7.2□□□□□ -1.26
CD47-201ENST00000355354 FAM161AQ3B820 660 aa7.2□□□□□ -1.26
CD47-201ENST00000355354 TLR7Q9NYK1 1049 aaKnown RBP7.2□□□□□ -1.26
CD47-201ENST00000355354 IGSF1Q8N6C5 1336 aa7.2□□□□□ -1.26
CD47-201ENST00000355354 HEG1Q9ULI3 1381 aa7.19□□□□□ -1.26
CD47-201ENST00000355354 CACNA1FO60840 1977 aa7.19□□□□□ -1.26
CD47-201ENST00000355354 PSDA5PKW4 1024 aaPredicted RBP7.19□□□□□ -1.26
CD47-201ENST00000355354 BAG6P46379 1132 aa7.19□□□□□ -1.26
CD47-201ENST00000355354 ADAMTS3O15072 1205 aa7.19□□□□□ -1.26
CD47-201ENST00000355354 CGNL1Q0VF96 1302 aa7.19□□□□□ -1.26
CD47-201ENST00000355354 PRIM1P49642 420 aaKnown RBP7.19□□□□□ -1.26
CD47-201ENST00000355354 TXNRD1Q16881 649 aa7.19□□□□□ -1.26
CD47-201ENST00000355354 RTL5Q5HYW3 569 aaPredicted RBP7.19□□□□□ -1.26
CD47-201ENST00000355354 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.19□□□□□ -1.26
CD47-201ENST00000355354 KCNH5Q8NCM2 988 aa7.19□□□□□ -1.26
CD47-201ENST00000355354 MYO9BQ13459 2157 aa7.19□□□□□ -1.26
CD47-201ENST00000355354 YBX3P16989 372 aaKnown RBP eCLIP7.18□□□□□ -1.269e-6■□□□□ 10.4
CD47-201ENST00000355354 RIC1Q4ADV7 1423 aa7.18□□□□□ -1.26
CD47-201ENST00000355354 ASCC3Q8N3C0 2202 aaKnown RBP7.18□□□□□ -1.26
CD47-201ENST00000355354 SPEF2Q9C093 1822 aa7.18□□□□□ -1.26
CD47-201ENST00000355354 SSC5DA1L4H1 1573 aa7.18□□□□□ -1.26
CD47-201ENST00000355354 SLURP2P0DP57 97 aa7.18□□□□□ -1.26
CD47-201ENST00000355354 SMC5Q8IY18 1101 aa7.18□□□□□ -1.26
CD47-201ENST00000355354 MYH10P35580 1976 aa7.18□□□□□ -1.26
CD47-201ENST00000355354 SLC27A3Q5K4L6 730 aa7.18□□□□□ -1.26
CD47-201ENST00000355354 IL17REQ8NFR9 667 aa7.18□□□□□ -1.26
CD47-201ENST00000355354 PRDM10Q9NQV6 1147 aa7.18□□□□□ -1.26
CD47-201ENST00000355354 PA2G4Q9UQ80 394 aaKnown RBP7.18□□□□□ -1.26
CD47-201ENST00000355354 CYP27B1O15528 508 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 MCM4P33991 863 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 EPHA10Q5JZY3 1008 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 PLEKHM2Q8IWE5 1019 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 DNAJC5GQ8N7S2 189 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 USP26Q9BXU7 913 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 MICAL3Q7RTP6 2002 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 OTOFQ9HC10 1997 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 INCENPQ9NQS7 918 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 FLT4P35916 1363 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 CEMIPQ8WUJ3 1361 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 TMF1P82094 1093 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 RALBP1Q15311 655 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 MTFR1LQ9H019 292 aa7.17□□□□□ -1.26
CD47-201ENST00000355354 PRELPP51888 382 aa7.16□□□□□ -1.26
CD47-201ENST00000355354 ABTB2Q8N961 1025 aa7.16□□□□□ -1.26
CD47-201ENST00000355354 SEC62Q99442 399 aaKnown RBP7.16□□□□□ -1.26
CD47-201ENST00000355354 SYT17Q9BSW7 474 aa7.16□□□□□ -1.26
CD47-201ENST00000355354 PRDM11Q9NQV5 511 aa7.16□□□□□ -1.26
CD47-201ENST00000355354 ZC3H6P61129 1189 aaKnown RBP7.16□□□□□ -1.26
CD47-201ENST00000355354 NBPF6Q5VWK0 638 aa7.16□□□□□ -1.26
CD47-201ENST00000355354 NBPF4Q96M43 638 aa7.16□□□□□ -1.26
CD47-201ENST00000355354 SCN9AQ15858 1988 aa7.16□□□□□ -1.26
CD47-201ENST00000355354 IL13P35225 146 aa7.16□□□□□ -1.26
CD47-201ENST00000355354 LTV1Q96GA3 475 aaPredicted RBP7.16□□□□□ -1.26
CD47-201ENST00000355354 MVPQ14764 893 aaKnown RBP7.15□□□□□ -1.26
CD47-201ENST00000355354 ST7Q9NRC1 585 aa7.15□□□□□ -1.26
CD47-201ENST00000355354 SPTBN2O15020 2390 aa7.15□□□□□ -1.26
CD47-201ENST00000355354 URB1O60287 2271 aaKnown RBP7.15□□□□□ -1.26
CD47-201ENST00000355354 A0A0U1RQJ8 604 aa7.15□□□□□ -1.26
CD47-201ENST00000355354 KCNQ4P56696 695 aa7.15□□□□□ -1.26
CD47-201ENST00000355354 ZNF784Q8NCA9 323 aaPredicted RBP7.15□□□□□ -1.26
CD47-201ENST00000355354 ATRIPQ8WXE1 791 aa7.15□□□□□ -1.26
CD47-201ENST00000355354 SDSP20132 328 aa7.15□□□□□ -1.27
CD47-201ENST00000355354 SULT6B1Q6IMI4 303 aa7.15□□□□□ -1.27
CD47-201ENST00000355354 ITPRIPQ8IWB1 547 aa7.15□□□□□ -1.27
CD47-201ENST00000355354 ZNF710Q8N1W2 664 aa7.15□□□□□ -1.27
CD47-201ENST00000355354 EIF4A2Q14240 407 aaKnown RBP7.14□□□□□ -1.27
CD47-201ENST00000355354 CHADLQ6NUI6 762 aa7.14□□□□□ -1.27
CD47-201ENST00000355354 ATF7IPQ6VMQ6 1270 aa7.14□□□□□ -1.27
CD47-201ENST00000355354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.14□□□□□ -1.27
CD47-201ENST00000355354 MAPK8IP2Q13387 824 aaPredicted RBP7.14□□□□□ -1.27
CD47-201ENST00000355354 ANKRD45Q5TZF3 282 aa7.14□□□□□ -1.27
CD47-201ENST00000355354 MORC1Q86VD1 984 aa7.14□□□□□ -1.27
CD47-201ENST00000355354 SMC4Q9NTJ3 1288 aa7.14□□□□□ -1.27
CD47-201ENST00000355354 SALL3Q9BXA9 1300 aa7.14□□□□□ -1.27
CD47-201ENST00000355354 APBA3O96018 575 aa7.13□□□□□ -1.27
CD47-201ENST00000355354 SRPK2P78362 688 aaKnown RBP7.13□□□□□ -1.27
CD47-201ENST00000355354 DDX11Q96FC9 970 aa7.13□□□□□ -1.27
CD47-201ENST00000355354 ZMYND15Q9H091 742 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms