RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 C1QTNF8P60827 252 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 NR6A1Q15406 480 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 EFCAB2Q5VUJ9 269 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 INTS3Q68E01 1043 aaKnown RBP2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 ANKLE2Q86XL3 938 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 THEMISQ8N1K5 641 aaPredicted RBP2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 STAG2Q8N3U4 1231 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 TMEM87AQ8NBN3 555 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 PMFBP1Q8TBY8 1022 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 DDX1Q92499 740 aaKnown RBP2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 DDX12PQ92771 950 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 CAMKK2Q96RR4 588 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 BRDTQ58F21 947 aaPredicted RBP2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 HINFPQ9BQA5 517 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 OSBPL7Q9BZF2 842 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 PTPN22Q9Y2R2 807 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 CLSPNQ9HAW4 1339 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 USP2O75604 605 aaPredicted RBP2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 AKAP4Q5JQC9 854 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 SAP130Q9H0E3 1048 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 KLF15Q9UIH9 416 aa2.89□□□□□ -1.95
SMARCAD1-201ENST00000354268 KCNH2Q12809 1159 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 MYBPC2Q14324 1141 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 SOGA3Q5TF21 947 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 SHDQ96IW2 340 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 PPP4R2Q9NY27 417 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 PARP2Q9UGN5 583 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 ZNF112Q9UJU3 913 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 KDM5CP41229 1560 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 TMEM94Q12767 1356 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 A0A1B0GVC2 190 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 EXOSC10Q01780 885 aaKnown RBP2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 DACT2Q5SW24 774 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 ACBD5Q5T8D3 534 aaPredicted RBP2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 GPR153Q6NV75 609 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 GAS2L1Q99501 681 aaPredicted RBP2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 C19orf44Q9H6X5 657 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 ARNT2Q9HBZ2 717 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 PDZRN3Q9UPQ7 1066 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 NCLP19338 710 aaKnown RBP2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 FAM43AQ8N2R8 423 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 FAM161BQ96MY7 647 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 PRDM6Q9NQX0 595 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 CREB3O43889 395 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 RXRGP48443 463 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 CREB3L3Q68CJ9 461 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 MCTP2Q6DN12 878 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 NKAPQ8N5F7 415 aaKnown RBP2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 ARHGEF10LQ9HCE6 1279 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 PRDM10Q9NQV6 1147 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 EVA1BQ9NVM1 165 aa2.88□□□□□ -1.95
SMARCAD1-201ENST00000354268 A6NNZ2 444 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 PRSS47A8MTI9 375 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 CLSTN1O94985 981 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 GPSM2P81274 684 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 BAP1Q92560 729 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 KHSRPQ92945 711 aaKnown RBP eCLIP2.87□□□□□ -1.953e-7■■■■□ 24
SMARCAD1-201ENST00000354268 PRKD2Q9BZL6 878 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 ERBB3P21860 1342 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 SPATA31A6Q5VVP1 1343 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 COL17A1Q9UMD9 1497 aaPredicted RBP2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 NINLQ9Y2I6 1382 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 ADCY3O60266 1144 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 AVPR2P30518 371 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 SLFNL1Q499Z3 407 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 KIAA1614Q5VZ46 1190 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 ANKMY2Q8IV38 441 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 ZNF687Q8N1G0 1237 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 SHCBP1Q8NEM2 672 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 NELL1Q92832 810 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 DNAJC2Q99543 621 aaKnown RBP2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 UHRF1BP1Q6BDS2 1440 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 SYNJ2O15056 1496 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 USP17L5A8MUK1 530 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 ITGBL1O95965 494 aaPredicted RBP2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 POU3F2P20265 443 aaPredicted RBP2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 LRRC41Q15345 812 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 TRAPPC3LQ5T215 181 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 SLC4A9Q96Q91 983 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 ADAM33Q9BZ11 813 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 G3BP2Q9UN86 482 aaKnown RBP2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 TACC3Q9Y6A5 838 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 WDR7Q9Y4E6 1490 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 HSPA6P17066 643 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 NONOQ15233 471 aaKnown RBP eCLIP2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 NBPF6Q5VWK0 638 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 LHFPL2Q6ZUX7 228 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 KCNG4Q8TDN1 519 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 NBPF4Q96M43 638 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 ORAI3Q9BRQ5 295 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 MRIQ9BWK5 157 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 ZNF281Q9Y2X9 895 aa2.87□□□□□ -1.95
SMARCAD1-201ENST00000354268 INHBEP58166 350 aa2.86□□□□□ -1.95
SMARCAD1-201ENST00000354268 KCNC4Q03721 635 aa2.86□□□□□ -1.95
SMARCAD1-201ENST00000354268 NR1H3Q13133 447 aa2.86□□□□□ -1.95
SMARCAD1-201ENST00000354268 MTFR1Q15390 333 aa2.86□□□□□ -1.95
SMARCAD1-201ENST00000354268 RASIP1Q5U651 963 aa2.86□□□□□ -1.95
SMARCAD1-201ENST00000354268 CELF2-AS1Q8N7Q2 184 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms