RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 LMOD1P29536 600 aaPredicted RBP21.09■□□□□ 0.97
COPE-202ENST00000349893 HOXA10P31260 410 aaPredicted RBP21.09■□□□□ 0.97
COPE-202ENST00000349893 PRKAR2BP31323 418 aa21.09■□□□□ 0.97
COPE-202ENST00000349893 BEGAINQ9BUH8 593 aa21.09■□□□□ 0.97
COPE-202ENST00000349893 TLL2Q9Y6L7 1015 aa21.09■□□□□ 0.97
COPE-202ENST00000349893 LAMB4A4D0S4 1761 aa21.09■□□□□ 0.97
COPE-202ENST00000349893 MAP2K2P36507 400 aa21.08■□□□□ 0.97
COPE-202ENST00000349893 EPS15P42566 896 aa21.08■□□□□ 0.97
COPE-202ENST00000349893 FMR1Q06787 632 aaKnown RBP eCLIP21.08■□□□□ 0.976e-7■■■□□ 15.8
COPE-202ENST00000349893 IBTKQ9P2D0 1353 aaPredicted RBP21.08■□□□□ 0.96
COPE-202ENST00000349893 CYP4F22Q6NT55 531 aa21.07■□□□□ 0.96
COPE-202ENST00000349893 NYXQ9GZU5 481 aa21.07■□□□□ 0.96
COPE-202ENST00000349893 PCDH10Q9P2E7 1040 aa21.07■□□□□ 0.96
COPE-202ENST00000349893 GJA3Q9Y6H8 435 aa21.07■□□□□ 0.96
COPE-202ENST00000349893 NUP98P52948 1817 aa21.06■□□□□ 0.96
COPE-202ENST00000349893 CCDC85CA6NKD9 419 aa21.06■□□□□ 0.96
COPE-202ENST00000349893 FAM177BA6PVY3 158 aa21.06■□□□□ 0.96
COPE-202ENST00000349893 ERVV-1B6SEH8 477 aa21.06■□□□□ 0.96
COPE-202ENST00000349893 GTF2E1P29083 439 aaPredicted RBP21.05■□□□□ 0.96
COPE-202ENST00000349893 HHIPL1Q96JK4 782 aa21.05■□□□□ 0.96
COPE-202ENST00000349893 TRAF5O00463 557 aa21.04■□□□□ 0.96
COPE-202ENST00000349893 CA12O43570 354 aa21.04■□□□□ 0.96
COPE-202ENST00000349893 MCM10Q7L590 875 aa21.04■□□□□ 0.96
COPE-202ENST00000349893 LARGE2Q8N3Y3 721 aa21.04■□□□□ 0.96
COPE-202ENST00000349893 HTATSF1O43719 755 aaKnown RBP21.03■□□□□ 0.96
COPE-202ENST00000349893 SAPCD2Q86UD0 394 aa21.03■□□□□ 0.96
COPE-202ENST00000349893 NUTM1Q86Y26 1132 aa21.03■□□□□ 0.96
COPE-202ENST00000349893 CRAMP1Q96RY5 1269 aa21.03■□□□□ 0.96
COPE-202ENST00000349893 PAXIP1Q6ZW49 1069 aaPredicted RBP21.02■□□□□ 0.96
COPE-202ENST00000349893 RTF1Q92541 710 aaKnown RBP21.02■□□□□ 0.96
COPE-202ENST00000349893 RPGRQ92834 1020 aaKnown RBP21.02■□□□□ 0.96
COPE-202ENST00000349893 VPS33BQ9H267 617 aa21.02■□□□□ 0.96
COPE-202ENST00000349893 ADARB2Q9NS39 739 aaKnown RBP21.02■□□□□ 0.96
COPE-202ENST00000349893 GPRC5DQ9NZD1 345 aa21.02■□□□□ 0.96
COPE-202ENST00000349893 AOC2O75106 756 aa21.01■□□□□ 0.95
COPE-202ENST00000349893 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
COPE-202ENST00000349893 PGAP2Q9UHJ9 254 aa21.01■□□□□ 0.95
COPE-202ENST00000349893 MAP3K15Q6ZN16 1313 aa21.01■□□□□ 0.95
COPE-202ENST00000349893 UBN2Q6ZU65 1347 aa21.01■□□□□ 0.95
COPE-202ENST00000349893 BRPF1P55201 1214 aaPredicted RBP21■□□□□ 0.95
COPE-202ENST00000349893 NIM1KQ8IY84 436 aa21■□□□□ 0.95
COPE-202ENST00000349893 PPEF1O14829 653 aaPredicted RBP20.99■□□□□ 0.95
COPE-202ENST00000349893 TAF7Q15545 349 aaPredicted RBP20.99■□□□□ 0.95
COPE-202ENST00000349893 SLC51AQ86UW1 340 aa20.99■□□□□ 0.95
COPE-202ENST00000349893 MCOLN1Q9GZU1 580 aa20.99■□□□□ 0.95
COPE-202ENST00000349893 TSKSQ9UJT2 592 aa20.99■□□□□ 0.95
COPE-202ENST00000349893 KDM3BQ7LBC6 1761 aa20.98■□□□□ 0.95
COPE-202ENST00000349893 GRM1Q13255 1194 aa20.98■□□□□ 0.95
COPE-202ENST00000349893 DCTN1Q14203 1278 aa20.98■□□□□ 0.95
COPE-202ENST00000349893 RBM17Q96I25 401 aaKnown RBP20.98■□□□□ 0.95
COPE-202ENST00000349893 CFAP53Q96M91 514 aa20.98■□□□□ 0.95
COPE-202ENST00000349893 CDHR2Q9BYE9 1310 aa20.98■□□□□ 0.95
COPE-202ENST00000349893 ZNF34Q8IZ26 560 aa20.97■□□□□ 0.95
COPE-202ENST00000349893 RTFDC1Q9BY42 306 aaPredicted RBP20.97■□□□□ 0.95
COPE-202ENST00000349893 NUDCQ9Y266 331 aa20.97■□□□□ 0.95
COPE-202ENST00000349893 CASP8AP2Q9UKL3 1982 aa20.97■□□□□ 0.95
COPE-202ENST00000349893 PPIP5K2O43314 1243 aa20.96■□□□□ 0.95
COPE-202ENST00000349893 CELF2O95319 508 aaKnown RBP20.96■□□□□ 0.95
COPE-202ENST00000349893 NTSR2O95665 410 aa20.96■□□□□ 0.95
COPE-202ENST00000349893 CXCL9Q07325 125 aa20.96■□□□□ 0.95
COPE-202ENST00000349893 SUSD4Q5VX71 490 aa20.96■□□□□ 0.95
COPE-202ENST00000349893 ZC3H15Q8WU90 426 aaKnown RBP20.96■□□□□ 0.95
COPE-202ENST00000349893 TTLL7Q6ZT98 887 aa20.95■□□□□ 0.94
COPE-202ENST00000349893 C3orf67Q6ZVT6 689 aa20.95■□□□□ 0.94
COPE-202ENST00000349893 ZNRF3Q9ULT6 936 aa20.95■□□□□ 0.94
COPE-202ENST00000349893 ATP6V0A2Q9Y487 856 aa20.95■□□□□ 0.94
COPE-202ENST00000349893 PDE4DIPQ5VU43 2346 aa20.95■□□□□ 0.94
COPE-202ENST00000349893 AOC3Q16853 763 aa20.94■□□□□ 0.94
COPE-202ENST00000349893 KIF6Q6ZMV9 814 aa20.94■□□□□ 0.94
COPE-202ENST00000349893 U2AF1L5P0DN76 240 aaPredicted RBP20.93■□□□□ 0.94
COPE-202ENST00000349893 GPTP24298 496 aa20.93■□□□□ 0.94
COPE-202ENST00000349893 GMPSP49915 693 aaPredicted RBP20.93■□□□□ 0.94
COPE-202ENST00000349893 U2AF1Q01081 240 aaKnown RBP eCLIP20.93■□□□□ 0.94
COPE-202ENST00000349893 GLIS2Q9BZE0 524 aaPredicted RBP20.93■□□□□ 0.94
COPE-202ENST00000349893 SLC10A5Q5PT55 438 aa20.92■□□□□ 0.94
COPE-202ENST00000349893 GIGYF2Q6Y7W6 1299 aaKnown RBP20.92■□□□□ 0.94
COPE-202ENST00000349893 NGEFQ8N5V2 710 aa20.92■□□□□ 0.94
COPE-202ENST00000349893 SUPT20HQ8NEM7 779 aa20.92■□□□□ 0.94
COPE-202ENST00000349893 PNISRQ8TF01 805 aaKnown RBP20.92■□□□□ 0.94
COPE-202ENST00000349893 MIS18AQ9NYP9 233 aa20.92■□□□□ 0.94
COPE-202ENST00000349893 HIRAP54198 1017 aaPredicted RBP20.91■□□□□ 0.94
COPE-202ENST00000349893 EIF4A1P60842 406 aaKnown RBP20.91■□□□□ 0.94
COPE-202ENST00000349893 CIAPIN1Q6FI81 312 aa20.91■□□□□ 0.94
COPE-202ENST00000349893 ERBB4Q15303 1308 aa20.9■□□□□ 0.94
COPE-202ENST00000349893 NOGQ13253 232 aa20.9■□□□□ 0.94
COPE-202ENST00000349893 DGKZQ13574 1117 aa20.9■□□□□ 0.94
COPE-202ENST00000349893 PARP10Q53GL7 1025 aa20.9■□□□□ 0.94
COPE-202ENST00000349893 CDC37L1Q7L3B6 337 aa20.9■□□□□ 0.94
COPE-202ENST00000349893 NLRP3Q96P20 1036 aa20.9■□□□□ 0.94
COPE-202ENST00000349893 ZBTB3Q9H5J0 574 aa20.9■□□□□ 0.94
COPE-202ENST00000349893 ABCC4O15439 1325 aa20.89■□□□□ 0.93
COPE-202ENST00000349893 DLG5Q8TDM6 1919 aa20.89■□□□□ 0.93
COPE-202ENST00000349893 TCERG1O14776 1098 aaKnown RBP20.89■□□□□ 0.93
COPE-202ENST00000349893 KIAA2012Q0VF49 1180 aa20.89■□□□□ 0.93
COPE-202ENST00000349893 PPP1R42Q7Z4L9 355 aa20.89■□□□□ 0.93
COPE-202ENST00000349893 TMX4Q9H1E5 349 aaPredicted RBP20.89■□□□□ 0.93
COPE-202ENST00000349893 RRP7AQ9Y3A4 280 aaKnown RBP20.89■□□□□ 0.93
COPE-202ENST00000349893 ANKRD36CQ5JPF3 1778 aa20.89■□□□□ 0.93
COPE-202ENST00000349893 CNGB1Q14028 1251 aaPredicted RBP20.88■□□□□ 0.93
COPE-202ENST00000349893 LRP10Q7Z4F1 713 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms