RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CPLX3Q8WVH0 158 aa26.57■■□□□ 1.84
NPAS3-201ENST00000346562 HDAC9Q9UKV0 1011 aa26.57■■□□□ 1.84
NPAS3-201ENST00000346562 ZSCAN30Q86W11 494 aa26.56■■□□□ 1.84
NPAS3-201ENST00000346562 PPM1EQ8WY54 764 aa26.56■■□□□ 1.84
NPAS3-201ENST00000346562 HOMER2Q9NSB8 354 aa26.56■■□□□ 1.84
NPAS3-201ENST00000346562 CDK13Q14004 1512 aaKnown RBP26.56■■□□□ 1.84
NPAS3-201ENST00000346562 ESPNB1AK53 854 aa26.56■■□□□ 1.84
NPAS3-201ENST00000346562 ZGPATQ8N5A5 531 aaKnown RBP26.56■■□□□ 1.84
NPAS3-201ENST00000346562 PUF60Q9UHX1 559 aaKnown RBP26.56■■□□□ 1.84
NPAS3-201ENST00000346562 GJB2P29033 226 aa26.55■■□□□ 1.84
NPAS3-201ENST00000346562 UBA7P41226 1012 aa26.55■■□□□ 1.84
NPAS3-201ENST00000346562 UBE4AQ14139 1066 aa26.55■■□□□ 1.84
NPAS3-201ENST00000346562 LRRC45Q96CN5 670 aa26.55■■□□□ 1.84
NPAS3-201ENST00000346562 RMND1Q9NWS8 449 aa26.55■■□□□ 1.84
NPAS3-201ENST00000346562 KIAA0586Q9BVV6 1533 aa26.55■■□□□ 1.84
NPAS3-201ENST00000346562 NBPF6Q5VWK0 638 aa26.55■■□□□ 1.84
NPAS3-201ENST00000346562 NBPF5PQ86XG9 351 aaPredicted RBP26.55■■□□□ 1.84
NPAS3-201ENST00000346562 NBPF4Q96M43 638 aa26.55■■□□□ 1.84
NPAS3-201ENST00000346562 BCCIPQ9P287 314 aaKnown RBP eCLIP26.55■■□□□ 1.84
NPAS3-201ENST00000346562 IFI16Q16666 785 aaKnown RBP26.54■■□□□ 1.84
NPAS3-201ENST00000346562 MICALCLQ6ZW33 695 aa26.54■■□□□ 1.84
NPAS3-201ENST00000346562 USP37Q86T82 979 aa26.54■■□□□ 1.84
NPAS3-201ENST00000346562 CCDC144CPQ8IYA2 1237 aa26.54■■□□□ 1.84
NPAS3-201ENST00000346562 SNRPA1P09661 255 aaKnown RBP26.54■■□□□ 1.84
NPAS3-201ENST00000346562 EXOC1Q9NV70 894 aa26.54■■□□□ 1.84
NPAS3-201ENST00000346562 SLC26A6Q9BXS9 759 aa26.53■■□□□ 1.84
NPAS3-201ENST00000346562 SSX2IPQ9Y2D8 614 aa26.53■■□□□ 1.84
NPAS3-201ENST00000346562 GOLGA6L9A6NEM1 432 aa26.53■■□□□ 1.84
NPAS3-201ENST00000346562 FERP16591 822 aa26.53■■□□□ 1.84
NPAS3-201ENST00000346562 KRT23Q9C075 422 aa26.53■■□□□ 1.84
NPAS3-201ENST00000346562 ACTN2P35609 894 aa26.53■■□□□ 1.84
NPAS3-201ENST00000346562 TOP2BQ02880 1626 aa26.53■■□□□ 1.84
NPAS3-201ENST00000346562 DDX12PQ92771 950 aa26.52■■□□□ 1.84
NPAS3-201ENST00000346562 NEK1Q96PY6 1258 aa26.52■■□□□ 1.84
NPAS3-201ENST00000346562 DNMBPQ6XZF7 1577 aa26.52■■□□□ 1.84
NPAS3-201ENST00000346562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.52■■□□□ 1.84
NPAS3-201ENST00000346562 FSD2A1L4K1 749 aa26.52■■□□□ 1.84
NPAS3-201ENST00000346562 TSPY3P0CV98 308 aa26.52■■□□□ 1.84
NPAS3-201ENST00000346562 TSPY8P0CW00 308 aa26.52■■□□□ 1.84
NPAS3-201ENST00000346562 TBC1D5Q92609 795 aa26.52■■□□□ 1.84
NPAS3-201ENST00000346562 ANKRD24Q8TF21 1146 aa26.51■■□□□ 1.83
NPAS3-201ENST00000346562 NCOA1Q15788 1441 aa26.51■■□□□ 1.83
NPAS3-201ENST00000346562 LMAN1P49257 510 aa26.51■■□□□ 1.83
NPAS3-201ENST00000346562 CEP63Q96MT8 703 aa26.51■■□□□ 1.83
NPAS3-201ENST00000346562 ERICH4A6NGS2 130 aa26.51■■□□□ 1.83
NPAS3-201ENST00000346562 STX6O43752 255 aa26.51■■□□□ 1.83
NPAS3-201ENST00000346562 UTP14AQ9BVJ6 771 aaKnown RBP26.51■■□□□ 1.83
NPAS3-201ENST00000346562 MICU3Q86XE3 530 aa26.51■■□□□ 1.83
NPAS3-201ENST00000346562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.51■■□□□ 1.83
NPAS3-201ENST00000346562 ORC3Q9UBD5 711 aaPredicted RBP26.51■■□□□ 1.83
NPAS3-201ENST00000346562 CKAP2LQ8IYA6 745 aa26.5■■□□□ 1.83
NPAS3-201ENST00000346562 PRPF4BQ13523 1007 aaKnown RBP26.5■■□□□ 1.83
NPAS3-201ENST00000346562 HLTFQ14527 1009 aaKnown RBP eCLIP26.5■■□□□ 1.83
NPAS3-201ENST00000346562 SPECC1Q5M775 1068 aa26.5■■□□□ 1.83
NPAS3-201ENST00000346562 NOP2P46087 812 aaKnown RBP26.5■■□□□ 1.83
NPAS3-201ENST00000346562 TRMT1LQ7Z2T5 733 aaKnown RBP26.5■■□□□ 1.83
NPAS3-201ENST00000346562 TMC6Q7Z403 805 aa26.5■■□□□ 1.83
NPAS3-201ENST00000346562 ATP5J2-PTCD1G3V325 749 aa26.49■■□□□ 1.83
NPAS3-201ENST00000346562 NBPF7P0C2Y1 421 aaPredicted RBP26.49■■□□□ 1.83
NPAS3-201ENST00000346562 EHBP1Q8NDI1 1231 aa26.49■■□□□ 1.83
NPAS3-201ENST00000346562 CGNQ9P2M7 1197 aaKnown RBP26.49■■□□□ 1.83
NPAS3-201ENST00000346562 IQGAP2Q13576 1575 aa26.49■■□□□ 1.83
NPAS3-201ENST00000346562 BMP15O95972 392 aa26.49■■□□□ 1.83
NPAS3-201ENST00000346562 SNRKQ9NRH2 765 aa26.49■■□□□ 1.83
NPAS3-201ENST00000346562 UBE3BQ7Z3V4 1068 aa26.49■■□□□ 1.83
NPAS3-201ENST00000346562 MCM5P33992 734 aa26.48■■□□□ 1.83
NPAS3-201ENST00000346562 WTAPQ15007 396 aa26.48■■□□□ 1.83
NPAS3-201ENST00000346562 CCDC102BQ68D86 513 aa26.48■■□□□ 1.83
NPAS3-201ENST00000346562 CCDC175P0C221 793 aa26.47■■□□□ 1.83
NPAS3-201ENST00000346562 IL27Q8NEV9 243 aa26.47■■□□□ 1.83
NPAS3-201ENST00000346562 SYNCQ9H7C4 482 aa26.47■■□□□ 1.83
NPAS3-201ENST00000346562 DHX29Q7Z478 1369 aaKnown RBP26.47■■□□□ 1.83
NPAS3-201ENST00000346562 CA8P35219 290 aa26.47■■□□□ 1.83
NPAS3-201ENST00000346562 CNNM2Q9H8M5 875 aa26.47■■□□□ 1.83
NPAS3-201ENST00000346562 HAND2P61296 217 aa26.47■■□□□ 1.83
NPAS3-201ENST00000346562 SLC4A8Q2Y0W8 1093 aa26.47■■□□□ 1.83
NPAS3-201ENST00000346562 ZFYP08048 801 aaPredicted RBP26.47■■□□□ 1.83
NPAS3-201ENST00000346562 IKBKGQ9Y6K9 419 aa26.46■■□□□ 1.83
NPAS3-201ENST00000346562 BBXQ8WY36 941 aaPredicted RBP26.46■■□□□ 1.83
NPAS3-201ENST00000346562 TRIM47Q96LD4 638 aa26.46■■□□□ 1.83
NPAS3-201ENST00000346562 PLVAPQ9BX97 442 aa26.46■■□□□ 1.83
NPAS3-201ENST00000346562 CADPS2Q86UW7 1296 aa26.46■■□□□ 1.83
NPAS3-201ENST00000346562 TMTC2Q8N394 836 aa26.46■■□□□ 1.83
NPAS3-201ENST00000346562 SREK1Q8WXA9 508 aaKnown RBP26.46■■□□□ 1.83
NPAS3-201ENST00000346562 TTC12Q9H892 705 aaPredicted RBP26.45■■□□□ 1.83
NPAS3-201ENST00000346562 PRXQ9BXM0 1461 aa26.45■■□□□ 1.82
NPAS3-201ENST00000346562 BIN1O00499 593 aa26.45■■□□□ 1.82
NPAS3-201ENST00000346562 ZSCAN16Q9H4T2 348 aaPredicted RBP26.45■■□□□ 1.82
NPAS3-201ENST00000346562 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
NPAS3-201ENST00000346562 SETDB2Q96T68 719 aa26.45■■□□□ 1.82
NPAS3-201ENST00000346562 KRT13P13646 458 aa26.44■■□□□ 1.82
NPAS3-201ENST00000346562 IFIT1BQ5T764 474 aaKnown RBP26.44■■□□□ 1.82
NPAS3-201ENST00000346562 GIMAP7Q8NHV1 300 aa26.44■■□□□ 1.82
NPAS3-201ENST00000346562 TMX1Q9H3N1 280 aa26.44■■□□□ 1.82
NPAS3-201ENST00000346562 MSH6P52701 1360 aa26.44■■□□□ 1.82
NPAS3-201ENST00000346562 ZNF804AQ7Z570 1209 aa26.44■■□□□ 1.82
NPAS3-201ENST00000346562 SCAF11Q99590 1463 aaKnown RBP26.44■■□□□ 1.82
NPAS3-201ENST00000346562 B4DLN1 442 aa26.43■■□□□ 1.82
NPAS3-201ENST00000346562 SSFA2P28290 1259 aa26.43■■□□□ 1.82
NPAS3-201ENST00000346562 MRPL12P52815 198 aaKnown RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms