RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 CTAGE5O15320 804 aa22.46■■□□□ 1.19
SH2B3-201ENST00000341259 CATIPQ7Z7H3 387 aa22.46■■□□□ 1.19
SH2B3-201ENST00000341259 RBM8AQ9Y5S9 174 aaKnown RBP22.46■■□□□ 1.19
SH2B3-201ENST00000341259 BLMP54132 1417 aaPredicted RBP22.46■■□□□ 1.19
SH2B3-201ENST00000341259 SNX21Q969T3 373 aa22.46■■□□□ 1.19
SH2B3-201ENST00000341259 PHAXQ9H814 394 aaKnown RBP22.46■■□□□ 1.19
SH2B3-201ENST00000341259 DDX19AQ9NUU7 478 aaKnown RBP22.46■■□□□ 1.19
SH2B3-201ENST00000341259 CRACR2BQ8N4Y2 399 aaPredicted RBP22.45■■□□□ 1.19
SH2B3-201ENST00000341259 CWF19L2Q2TBE0 894 aaKnown RBP22.45■■□□□ 1.18
SH2B3-201ENST00000341259 CCDC152Q4G0S7 254 aa22.45■■□□□ 1.18
SH2B3-201ENST00000341259 SBNO1A3KN83 1393 aa22.45■■□□□ 1.18
SH2B3-201ENST00000341259 FSIP1Q8NA03 581 aa22.45■■□□□ 1.18
SH2B3-201ENST00000341259 CCDC144CPQ8IYA2 1237 aa22.45■■□□□ 1.18
SH2B3-201ENST00000341259 TRIM35Q9UPQ4 493 aa22.45■■□□□ 1.18
SH2B3-201ENST00000341259 ZBTB7BO15156 539 aaPredicted RBP22.44■■□□□ 1.18
SH2B3-201ENST00000341259 IL2RBP14784 551 aa22.44■■□□□ 1.18
SH2B3-201ENST00000341259 SOS1Q07889 1333 aaPredicted RBP22.44■■□□□ 1.18
SH2B3-201ENST00000341259 UQCRHLA0A096LP55 91 aa22.44■■□□□ 1.18
SH2B3-201ENST00000341259 UQCRHP07919 91 aa22.44■■□□□ 1.18
SH2B3-201ENST00000341259 IL15P40933 162 aaPredicted RBP22.44■■□□□ 1.18
SH2B3-201ENST00000341259 PLEKHM2Q8IWE5 1019 aa22.44■■□□□ 1.18
SH2B3-201ENST00000341259 LUC7LQ9NQ29 371 aaKnown RBP22.44■■□□□ 1.18
SH2B3-201ENST00000341259 TTC41PQ6P2S7 1318 aa22.44■■□□□ 1.18
SH2B3-201ENST00000341259 NECAB1Q8N987 351 aa22.44■■□□□ 1.18
SH2B3-201ENST00000341259 RBM27Q9P2N5 1060 aaKnown RBP22.44■■□□□ 1.18
SH2B3-201ENST00000341259 MYO5CQ9NQX4 1742 aa22.44■■□□□ 1.18
SH2B3-201ENST00000341259 IARSP41252 1262 aaKnown RBP22.43■■□□□ 1.18
SH2B3-201ENST00000341259 MFSD6Q6ZSS7 791 aa22.43■■□□□ 1.18
SH2B3-201ENST00000341259 RAB11FIP4Q86YS3 637 aa22.43■■□□□ 1.18
SH2B3-201ENST00000341259 ZSCAN22P10073 491 aaPredicted RBP22.43■■□□□ 1.18
SH2B3-201ENST00000341259 METAP2P50579 478 aaKnown RBP eCLIP22.43■■□□□ 1.18
SH2B3-201ENST00000341259 ATP2B3Q16720 1220 aa22.43■■□□□ 1.18
SH2B3-201ENST00000341259 KLHL40Q2TBA0 621 aa22.43■■□□□ 1.18
SH2B3-201ENST00000341259 SLF2Q8IX21 1173 aa22.43■■□□□ 1.18
SH2B3-201ENST00000341259 ORC3Q9UBD5 711 aaPredicted RBP22.43■■□□□ 1.18
SH2B3-201ENST00000341259 ABCA8O94911 1581 aa22.43■■□□□ 1.18
SH2B3-201ENST00000341259 ZFYP08048 801 aaPredicted RBP22.43■■□□□ 1.18
SH2B3-201ENST00000341259 MCMDC2Q4G0Z9 681 aa22.43■■□□□ 1.18
SH2B3-201ENST00000341259 BRF1Q92994 677 aa22.43■■□□□ 1.18
SH2B3-201ENST00000341259 DCAF5Q96JK2 942 aa22.42■■□□□ 1.18
SH2B3-201ENST00000341259 INSRP06213 1382 aa22.42■■□□□ 1.18
SH2B3-201ENST00000341259 NMIQ13287 307 aaPredicted RBP22.42■■□□□ 1.18
SH2B3-201ENST00000341259 MBD5Q9P267 1494 aa22.42■■□□□ 1.18
SH2B3-201ENST00000341259 MICU3Q86XE3 530 aa22.42■■□□□ 1.18
SH2B3-201ENST00000341259 PLXNC1O60486 1568 aa22.42■■□□□ 1.18
SH2B3-201ENST00000341259 ATP6V1AP38606 617 aa22.42■■□□□ 1.18
SH2B3-201ENST00000341259 MCM5P33992 734 aa22.41■■□□□ 1.18
SH2B3-201ENST00000341259 NLRP5P59047 1200 aa22.41■■□□□ 1.18
SH2B3-201ENST00000341259 TXLNBQ8N3L3 684 aa22.41■■□□□ 1.18
SH2B3-201ENST00000341259 ACSBG1Q96GR2 724 aa22.41■■□□□ 1.18
SH2B3-201ENST00000341259 UBE2HP62256 183 aa22.41■■□□□ 1.18
SH2B3-201ENST00000341259 PPFIA3O75145 1194 aa22.41■■□□□ 1.18
SH2B3-201ENST00000341259 G2E3Q7L622 706 aa22.41■■□□□ 1.18
SH2B3-201ENST00000341259 NOM1Q5C9Z4 860 aaKnown RBP22.41■■□□□ 1.18
SH2B3-201ENST00000341259 USP25Q9UHP3 1055 aa22.41■■□□□ 1.18
SH2B3-201ENST00000341259 KDM6BO15054 1643 aa22.4■■□□□ 1.18
SH2B3-201ENST00000341259 NEO1Q92859 1461 aa22.4■■□□□ 1.18
SH2B3-201ENST00000341259 MYO6Q9UM54 1294 aa22.4■■□□□ 1.18
SH2B3-201ENST00000341259 EIF5P55010 431 aaKnown RBP22.4■■□□□ 1.18
SH2B3-201ENST00000341259 CNNM3Q8NE01 707 aa22.4■■□□□ 1.18
SH2B3-201ENST00000341259 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
SH2B3-201ENST00000341259 KDM5AP29375 1690 aaKnown RBP22.4■■□□□ 1.18
SH2B3-201ENST00000341259 TCEANC2Q96MN5 208 aa22.39■■□□□ 1.18
SH2B3-201ENST00000341259 KLHL10Q6JEL2 608 aa22.39■■□□□ 1.17
SH2B3-201ENST00000341259 C6orf229H3BNL8 230 aa22.39■■□□□ 1.17
SH2B3-201ENST00000341259 SFPQP23246 707 aaKnown RBP eCLIP22.39■■□□□ 1.17
SH2B3-201ENST00000341259 LRRC2Q9BYS8 371 aa22.39■■□□□ 1.17
SH2B3-201ENST00000341259 NBPF6Q5VWK0 638 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 NBPF5PQ86XG9 351 aaPredicted RBP22.38■■□□□ 1.17
SH2B3-201ENST00000341259 NBPF4Q96M43 638 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 CCDC194A0A1B0GVG4 234 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 RFC4P35249 363 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 CCDC96Q2M329 555 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 ZSCAN23Q3MJ62 389 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 CLIP2Q9UDT6 1046 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 KLF18A0A0U1RQI7 1052 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 EPB41L2O43491 1005 aaKnown RBP22.38■■□□□ 1.17
SH2B3-201ENST00000341259 LDHCP07864 332 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 ZSCAN16Q9H4T2 348 aaPredicted RBP22.38■■□□□ 1.17
SH2B3-201ENST00000341259 PAG1Q9NWQ8 432 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
SH2B3-201ENST00000341259 SEC24BO95487 1268 aa22.37■■□□□ 1.17
SH2B3-201ENST00000341259 SPTY2D1Q68D10 685 aaPredicted RBP22.37■■□□□ 1.17
SH2B3-201ENST00000341259 SLC26A6Q9BXS9 759 aa22.37■■□□□ 1.17
SH2B3-201ENST00000341259 PDE4BQ07343 736 aa22.37■■□□□ 1.17
SH2B3-201ENST00000341259 CCDC181Q5TID7 509 aa22.37■■□□□ 1.17
SH2B3-201ENST00000341259 ANKRD18AQ8IVF6 992 aa22.37■■□□□ 1.17
SH2B3-201ENST00000341259 BABAM1Q9NWV8 329 aa22.37■■□□□ 1.17
SH2B3-201ENST00000341259 BICC1Q9H694 974 aaKnown RBP22.36■■□□□ 1.17
SH2B3-201ENST00000341259 STX1AQ16623 288 aa22.36■■□□□ 1.17
SH2B3-201ENST00000341259 PCDH11XQ9BZA7 1347 aa22.36■■□□□ 1.17
SH2B3-201ENST00000341259 PCDH11YQ9BZA8 1340 aa22.36■■□□□ 1.17
SH2B3-201ENST00000341259 BAG3O95817 575 aa22.36■■□□□ 1.17
SH2B3-201ENST00000341259 TSPY2A6NKD2 308 aa22.36■■□□□ 1.17
SH2B3-201ENST00000341259 CHL1O00533 1208 aa22.36■■□□□ 1.17
SH2B3-201ENST00000341259 TFCP2Q12800 502 aa22.36■■□□□ 1.17
SH2B3-201ENST00000341259 Q6ZUG5 572 aa22.36■■□□□ 1.17
SH2B3-201ENST00000341259 ZFYVE16Q7Z3T8 1539 aa22.36■■□□□ 1.17
SH2B3-201ENST00000341259 SIRT1Q96EB6 747 aa22.35■■□□□ 1.17
SH2B3-201ENST00000341259 CFAP74Q9C0B2 1584 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms