RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 HTRA3P83110 453 aa22.24■■□□□ 1.15
BRCC3-202ENST00000340647 AIMP1Q12904 312 aaKnown RBP22.24■■□□□ 1.15
BRCC3-202ENST00000340647 SYNE4Q8N205 404 aa22.24■■□□□ 1.15
BRCC3-202ENST00000340647 RBM46Q8TBY0 533 aaKnown RBP22.24■■□□□ 1.15
BRCC3-202ENST00000340647 RRAGCQ9HB90 399 aa22.24■■□□□ 1.15
BRCC3-202ENST00000340647 IFT57Q9NWB7 429 aa22.24■■□□□ 1.15
BRCC3-202ENST00000340647 PCNTO95613 3336 aa22.23■■□□□ 1.15
BRCC3-202ENST00000340647 HDGFL1Q5TGJ6 251 aa22.23■■□□□ 1.15
BRCC3-202ENST00000340647 GLTPD2A6NH11 291 aa22.22■■□□□ 1.15
BRCC3-202ENST00000340647 GTF2E1P29083 439 aaPredicted RBP22.22■■□□□ 1.15
BRCC3-202ENST00000340647 HOXA10P31260 410 aaPredicted RBP22.22■■□□□ 1.15
BRCC3-202ENST00000340647 SLC10A5Q5PT55 438 aa22.22■■□□□ 1.15
BRCC3-202ENST00000340647 NLRP10Q86W26 655 aa22.22■■□□□ 1.15
BRCC3-202ENST00000340647 C8orf58Q8NAV2 365 aa22.22■■□□□ 1.15
BRCC3-202ENST00000340647 TAOK3Q9H2K8 898 aa22.22■■□□□ 1.15
BRCC3-202ENST00000340647 TCIRG1Q13488 830 aa22.21■■□□□ 1.15
BRCC3-202ENST00000340647 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
BRCC3-202ENST00000340647 COL4A5P29400 1685 aa22.2■■□□□ 1.15
BRCC3-202ENST00000340647 PARP10Q53GL7 1025 aa22.2■■□□□ 1.14
BRCC3-202ENST00000340647 ELL2O00472 640 aaPredicted RBP22.19■■□□□ 1.14
BRCC3-202ENST00000340647 GNAI1P63096 354 aa22.19■■□□□ 1.14
BRCC3-202ENST00000340647 CCDC93Q567U6 631 aa22.19■■□□□ 1.14
BRCC3-202ENST00000340647 TSPYL6Q8N831 410 aa22.19■■□□□ 1.14
BRCC3-202ENST00000340647 ZNF428Q96B54 188 aa22.19■■□□□ 1.14
BRCC3-202ENST00000340647 DBF4Q9UBU7 674 aaPredicted RBP22.19■■□□□ 1.14
BRCC3-202ENST00000340647 COL4A1P02462 1669 aa22.18■■□□□ 1.14
BRCC3-202ENST00000340647 ALDH1B1P30837 517 aa22.18■■□□□ 1.14
BRCC3-202ENST00000340647 CCDC27Q2M243 656 aa22.18■■□□□ 1.14
BRCC3-202ENST00000340647 PPP1R42Q7Z4L9 355 aa22.18■■□□□ 1.14
BRCC3-202ENST00000340647 ISCA1Q9BUE6 129 aa22.18■■□□□ 1.14
BRCC3-202ENST00000340647 UTP14AQ9BVJ6 771 aaKnown RBP22.18■■□□□ 1.14
BRCC3-202ENST00000340647 FSTL1Q12841 308 aa22.17■■□□□ 1.14
BRCC3-202ENST00000340647 SOGA3Q5TF21 947 aa22.17■■□□□ 1.14
BRCC3-202ENST00000340647 WWC1Q8IX03 1113 aa22.17■■□□□ 1.14
BRCC3-202ENST00000340647 PLBD2Q8NHP8 589 aa22.17■■□□□ 1.14
BRCC3-202ENST00000340647 PHAXQ9H814 394 aaKnown RBP22.17■■□□□ 1.14
BRCC3-202ENST00000340647 MRS2Q9HD23 443 aa22.17■■□□□ 1.14
BRCC3-202ENST00000340647 FKBP4Q02790 459 aaKnown RBP eCLIP22.16■■□□□ 1.14
BRCC3-202ENST00000340647 ANKRD13DQ6ZTN6 518 aa22.16■■□□□ 1.14
BRCC3-202ENST00000340647 C16orf71Q8IYS4 520 aaPredicted RBP22.16■■□□□ 1.14
BRCC3-202ENST00000340647 KLRG1Q96E93 195 aa22.16■■□□□ 1.14
BRCC3-202ENST00000340647 CRAMP1Q96RY5 1269 aa22.16■■□□□ 1.14
BRCC3-202ENST00000340647 ZNF277Q9NRM2 450 aaPredicted RBP22.16■■□□□ 1.14
BRCC3-202ENST00000340647 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
BRCC3-202ENST00000340647 HSP90AB3PQ58FF7 597 aa22.15■■□□□ 1.14
BRCC3-202ENST00000340647 TSR2Q969E8 191 aaKnown RBP22.15■■□□□ 1.14
BRCC3-202ENST00000340647 ANP32CO43423 234 aa22.14■■□□□ 1.13
BRCC3-202ENST00000340647 JMYQ8N9B5 988 aa22.14■■□□□ 1.13
BRCC3-202ENST00000340647 HYPKQ9NX55 129 aa22.14■■□□□ 1.13
BRCC3-202ENST00000340647 ATP5J2-PTCD1G3V325 749 aa22.13■■□□□ 1.13
BRCC3-202ENST00000340647 DDNO94850 711 aaPredicted RBP22.13■■□□□ 1.13
BRCC3-202ENST00000340647 CALD1Q05682 793 aaKnown RBP22.13■■□□□ 1.13
BRCC3-202ENST00000340647 RPGRQ92834 1020 aaKnown RBP22.13■■□□□ 1.13
BRCC3-202ENST00000340647 RNF123Q5XPI4 1314 aa22.12■■□□□ 1.13
BRCC3-202ENST00000340647 VEGFAP15692 232 aaPredicted RBP22.12■■□□□ 1.13
BRCC3-202ENST00000340647 NCBP3Q53F19 620 aaKnown RBP22.12■■□□□ 1.13
BRCC3-202ENST00000340647 RTKN2Q8IZC4 609 aa22.12■■□□□ 1.13
BRCC3-202ENST00000340647 NLRP3Q96P20 1036 aa22.12■■□□□ 1.13
BRCC3-202ENST00000340647 ABCC4O15439 1325 aa22.11■■□□□ 1.13
BRCC3-202ENST00000340647 ZNF541Q9H0D2 1346 aa22.11■■□□□ 1.13
BRCC3-202ENST00000340647 SCN4AP35499 1836 aa22.11■■□□□ 1.13
BRCC3-202ENST00000340647 RBM17Q96I25 401 aaKnown RBP22.11■■□□□ 1.13
BRCC3-202ENST00000340647 PSMD1Q99460 953 aa22.11■■□□□ 1.13
BRCC3-202ENST00000340647 TRMT112Q9UI30 125 aaKnown RBP22.11■■□□□ 1.13
BRCC3-202ENST00000340647 LRRC37AA6NMS7 1700 aa22.1■■□□□ 1.13
BRCC3-202ENST00000340647 TRIM28Q13263 835 aaKnown RBP22.1■■□□□ 1.13
BRCC3-202ENST00000340647 COL13A1Q5TAT6 717 aaPredicted RBP22.1■■□□□ 1.13
BRCC3-202ENST00000340647 SH3TC1Q8TE82 1336 aa22.09■■□□□ 1.13
BRCC3-202ENST00000340647 PPEF1O14829 653 aaPredicted RBP22.09■■□□□ 1.13
BRCC3-202ENST00000340647 IARSP41252 1262 aaKnown RBP22.09■■□□□ 1.13
BRCC3-202ENST00000340647 FZD9O00144 591 aa22.08■■□□□ 1.13
BRCC3-202ENST00000340647 TCERG1O14776 1098 aaKnown RBP22.08■■□□□ 1.13
BRCC3-202ENST00000340647 DPY19L2Q6NUT2 758 aa22.08■■□□□ 1.13
BRCC3-202ENST00000340647 FAM89AQ96GI7 184 aa22.08■■□□□ 1.13
BRCC3-202ENST00000340647 SPINK5Q9NQ38 1064 aaPredicted RBP22.08■■□□□ 1.13
BRCC3-202ENST00000340647 LTBP1Q14766 1721 aa22.08■■□□□ 1.12
BRCC3-202ENST00000340647 IL16Q14005 1332 aa22.07■■□□□ 1.12
BRCC3-202ENST00000340647 CACNA1FO60840 1977 aa22.07■■□□□ 1.12
BRCC3-202ENST00000340647 POTEIP0CG38 1075 aa22.07■■□□□ 1.12
BRCC3-202ENST00000340647 POTEJP0CG39 1038 aa22.07■■□□□ 1.12
BRCC3-202ENST00000340647 CC2D2BQ6DHV5 1058 aa22.07■■□□□ 1.12
BRCC3-202ENST00000340647 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
BRCC3-202ENST00000340647 ATP6V0A2Q9Y487 856 aa22.07■■□□□ 1.12
BRCC3-202ENST00000340647 DUOX1Q9NRD9 1551 aa22.07■■□□□ 1.12
BRCC3-202ENST00000340647 L3MBTL3Q96JM7 780 aaPredicted RBP22.06■■□□□ 1.12
BRCC3-202ENST00000340647 ADAMTSL1Q8N6G6 1762 aa22.06■■□□□ 1.12
BRCC3-202ENST00000340647 G2E3Q7L622 706 aa22.05■■□□□ 1.12
BRCC3-202ENST00000340647 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
BRCC3-202ENST00000340647 SF3B3Q15393 1217 aaKnown RBP22.04■■□□□ 1.12
BRCC3-202ENST00000340647 RTL5Q5HYW3 569 aaPredicted RBP22.04■■□□□ 1.12
BRCC3-202ENST00000340647 CCDC30Q5VVM6 783 aa22.04■■□□□ 1.12
BRCC3-202ENST00000340647 RIC3Q7Z5B4 369 aa22.04■■□□□ 1.12
BRCC3-202ENST00000340647 FANCIQ9NVI1 1328 aa22.04■■□□□ 1.12
BRCC3-202ENST00000340647 MYD88Q99836 296 aa22.03■■□□□ 1.12
BRCC3-202ENST00000340647 BBOX1O75936 387 aa22.02■■□□□ 1.12
BRCC3-202ENST00000340647 TWISTNBQ3B726 338 aaPredicted RBP22.02■■□□□ 1.12
BRCC3-202ENST00000340647 SP8Q8IXZ3 490 aa22.02■■□□□ 1.12
BRCC3-202ENST00000340647 METTL22Q9BUU2 404 aaPredicted RBP22.02■■□□□ 1.12
BRCC3-202ENST00000340647 RTFDC1Q9BY42 306 aaPredicted RBP22.02■■□□□ 1.12
BRCC3-202ENST00000340647 IGKV5-2P06315 115 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms