RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 C9orf78Q9NZ63 289 aaPredicted RBP12.11□□□□□ -0.47
HIF1A-202ENST00000337138 GNAT3A8MTJ3 354 aa12.11□□□□□ -0.47
HIF1A-202ENST00000337138 AP5Z1O43299 807 aa12.11□□□□□ -0.47
HIF1A-202ENST00000337138 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
HIF1A-202ENST00000337138 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 ADCY5O95622 1261 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 NBPF7P0C2Y1 421 aaPredicted RBP12.1□□□□□ -0.47
HIF1A-202ENST00000337138 CEBPZQ03701 1054 aaKnown RBP12.1□□□□□ -0.47
HIF1A-202ENST00000337138 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 ABTB2Q8N961 1025 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 PHF14O94880 888 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 HOXB7P09629 217 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
HIF1A-202ENST00000337138 FGD1P98174 961 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 RUFY3Q7L099 469 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 PA2G4Q9UQ80 394 aaKnown RBP12.1□□□□□ -0.47
HIF1A-202ENST00000337138 MYH7P12883 1935 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
HIF1A-202ENST00000337138 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
HIF1A-202ENST00000337138 KDM6AO15550 1401 aaPredicted RBP12.09□□□□□ -0.47
HIF1A-202ENST00000337138 SNX14Q9Y5W7 946 aa12.09□□□□□ -0.47
HIF1A-202ENST00000337138 EID1Q9Y6B2 187 aa12.09□□□□□ -0.47
HIF1A-202ENST00000337138 PI4KAP2A4QPH2 592 aa12.09□□□□□ -0.47
HIF1A-202ENST00000337138 MCM2P49736 904 aa12.09□□□□□ -0.47
HIF1A-202ENST00000337138 AK2P54819 239 aa12.09□□□□□ -0.47
HIF1A-202ENST00000337138 DNM1Q05193 864 aaKnown RBP12.09□□□□□ -0.47
HIF1A-202ENST00000337138 PI4KAP1Q8N8J0 262 aa12.09□□□□□ -0.47
HIF1A-202ENST00000337138 TFIP11Q9UBB9 837 aaKnown RBP12.09□□□□□ -0.47
HIF1A-202ENST00000337138 CASZ1Q86V15 1759 aa12.09□□□□□ -0.47
HIF1A-202ENST00000337138 LARGE1O95461 756 aa12.09□□□□□ -0.47
HIF1A-202ENST00000337138 IFIT2P09913 472 aaKnown RBP12.09□□□□□ -0.47
HIF1A-202ENST00000337138 KCNQ3O43525 872 aa12.08□□□□□ -0.47
HIF1A-202ENST00000337138 HSPA2P54652 639 aa12.08□□□□□ -0.47
HIF1A-202ENST00000337138 CKAP2LQ8IYA6 745 aa12.08□□□□□ -0.47
HIF1A-202ENST00000337138 AKAP11Q9UKA4 1901 aa12.08□□□□□ -0.48
HIF1A-202ENST00000337138 TEFQ10587 303 aa12.08□□□□□ -0.48
HIF1A-202ENST00000337138 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
HIF1A-202ENST00000337138 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
HIF1A-202ENST00000337138 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
HIF1A-202ENST00000337138 MED23Q9ULK4 1368 aa12.08□□□□□ -0.48
HIF1A-202ENST00000337138 CNTROBQ8N137 903 aa12.08□□□□□ -0.48
HIF1A-202ENST00000337138 CCDC8Q9H0W5 538 aaPredicted RBP12.08□□□□□ -0.48
HIF1A-202ENST00000337138 LGR6Q9HBX8 967 aa12.08□□□□□ -0.48
HIF1A-202ENST00000337138 HYPKQ9NX55 129 aa12.08□□□□□ -0.48
HIF1A-202ENST00000337138 MYO5AQ9Y4I1 1855 aaKnown RBP12.07□□□□□ -0.48
HIF1A-202ENST00000337138 NECTIN1Q15223 517 aa12.07□□□□□ -0.48
HIF1A-202ENST00000337138 MPRIPQ6WCQ1 1025 aa12.07□□□□□ -0.48
HIF1A-202ENST00000337138 CHPF2Q9P2E5 772 aa12.07□□□□□ -0.48
HIF1A-202ENST00000337138 STX6O43752 255 aa12.07□□□□□ -0.48
HIF1A-202ENST00000337138 KCNA6P17658 529 aa12.07□□□□□ -0.48
HIF1A-202ENST00000337138 SYT1P21579 422 aa12.07□□□□□ -0.48
HIF1A-202ENST00000337138 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
HIF1A-202ENST00000337138 PLEKHG2Q9H7P9 1386 aa12.07□□□□□ -0.48
HIF1A-202ENST00000337138 ARAP2Q8WZ64 1704 aa12.07□□□□□ -0.48
HIF1A-202ENST00000337138 GJB2P29033 226 aa12.06□□□□□ -0.48
HIF1A-202ENST00000337138 IP6K1Q92551 441 aa12.06□□□□□ -0.48
HIF1A-202ENST00000337138 PDRG1Q9NUG6 133 aa12.06□□□□□ -0.48
HIF1A-202ENST00000337138 CLASRPQ8N2M8 674 aaKnown RBP12.06□□□□□ -0.48
HIF1A-202ENST00000337138 ALDH8A1Q9H2A2 487 aaPredicted RBP12.06□□□□□ -0.48
HIF1A-202ENST00000337138 HSP90B1P14625 803 aaKnown RBP12.05□□□□□ -0.48
HIF1A-202ENST00000337138 SASS6Q6UVJ0 657 aa12.05□□□□□ -0.48
HIF1A-202ENST00000337138 AACSQ86V21 672 aa12.05□□□□□ -0.48
HIF1A-202ENST00000337138 BOLA2Q9H3K6 86 aa12.05□□□□□ -0.48
HIF1A-202ENST00000337138 CGNQ9P2M7 1197 aaKnown RBP12.05□□□□□ -0.48
HIF1A-202ENST00000337138 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
HIF1A-202ENST00000337138 LARP1BQ659C4 914 aaKnown RBP12.05□□□□□ -0.48
HIF1A-202ENST00000337138 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.05□□□□□ -0.48
HIF1A-202ENST00000337138 A0A1B0GUL6 1792 aa12.05□□□□□ -0.48
HIF1A-202ENST00000337138 ZSCAN22P10073 491 aaPredicted RBP12.05□□□□□ -0.48
HIF1A-202ENST00000337138 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
HIF1A-202ENST00000337138 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
HIF1A-202ENST00000337138 LIMCH1Q9UPQ0 1083 aa12.05□□□□□ -0.48
HIF1A-202ENST00000337138 NDUFB9Q9Y6M9 179 aa12.05□□□□□ -0.48
HIF1A-202ENST00000337138 KCPQ6ZWJ8 1503 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 RAB11FIP3O75154 756 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 CWF19L2Q2TBE0 894 aaKnown RBP12.04□□□□□ -0.48
HIF1A-202ENST00000337138 ADCK5Q3MIX3 580 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 CCDC183Q5T5S1 534 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 KLHDC4Q8TBB5 520 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 DDX11Q96FC9 970 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 TAF6LQ9Y6J9 622 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 DOCK2Q92608 1830 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 ZKSCAN1P17029 563 aaPredicted RBP12.04□□□□□ -0.48
HIF1A-202ENST00000337138 PTH1RQ03431 593 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 BICD2Q8TD16 824 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 TNNT3P45378 269 aaPredicted RBP12.04□□□□□ -0.48
HIF1A-202ENST00000337138 NOLC1Q14978 699 aaKnown RBP eCLIP12.04□□□□□ -0.48
HIF1A-202ENST00000337138 PROSER3Q2NL68 480 aa12.04□□□□□ -0.48
HIF1A-202ENST00000337138 RBM43Q6ZSC3 357 aaKnown RBP12.04□□□□□ -0.48
HIF1A-202ENST00000337138 NPHP1O15259 732 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 SASH1O94885 1247 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 FSD1Q9BTV5 496 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 CYP46A1Q9Y6A2 500 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 ANKRD36CQ5JPF3 1778 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 MYL6BP14649 208 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 LRRC59Q96AG4 307 aaKnown RBP12.03□□□□□ -0.48
HIF1A-202ENST00000337138 KIF1BPQ96EK5 621 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 TSGA10IPQ3SY00 556 aa12.03□□□□□ -0.48
HIF1A-202ENST00000337138 LRRC2Q9BYS8 371 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms