RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 NSD3Q9BZ95 1437 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 RASAL2Q9UJF2 1139 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 BMP15O95972 392 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 CCDC8Q9H0W5 538 aaPredicted RBP16.73■□□□□ 0.27
NUP98-201ENST00000324932 ZNF444Q8N0Y2 327 aaPredicted RBP16.73■□□□□ 0.27
NUP98-201ENST00000324932 CCDC85AQ96PX6 553 aaPredicted RBP16.73■□□□□ 0.27
NUP98-201ENST00000324932 EHMT1Q9H9B1 1298 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 SYKP43405 635 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 SELENOOQ9BVL4 669 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 IQCGQ9H095 443 aaKnown RBP16.73■□□□□ 0.27
NUP98-201ENST00000324932 PRC1O43663 620 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 TACC1O75410 805 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 TTC31Q49AM3 519 aaPredicted RBP16.73■□□□□ 0.27
NUP98-201ENST00000324932 SLC52A1Q9NWF4 448 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
NUP98-201ENST00000324932 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
NUP98-201ENST00000324932 PRPHP41219 470 aa16.72■□□□□ 0.27
NUP98-201ENST00000324932 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
NUP98-201ENST00000324932 PROSER2Q86WR7 435 aaPredicted RBP16.72■□□□□ 0.27
NUP98-201ENST00000324932 OTUD6BQ8N6M0 293 aa16.72■□□□□ 0.27
NUP98-201ENST00000324932 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
NUP98-201ENST00000324932 NBPF11Q86T75 865 aa16.72■□□□□ 0.27
NUP98-201ENST00000324932 PTPRCP08575 1304 aa16.72■□□□□ 0.27
NUP98-201ENST00000324932 STARD3NLO95772 234 aa16.72■□□□□ 0.27
NUP98-201ENST00000324932 KIF5BP33176 963 aa16.72■□□□□ 0.27
NUP98-201ENST00000324932 ANO6Q4KMQ2 910 aa16.72■□□□□ 0.27
NUP98-201ENST00000324932 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
NUP98-201ENST00000324932 TMX3Q96JJ7 454 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 DRC1Q96MC2 740 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 SMC6Q96SB8 1091 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 MXRA7P84157 204 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 GRIPAP1Q4V328 841 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 SPTY2D1Q68D10 685 aaPredicted RBP16.71■□□□□ 0.27
NUP98-201ENST00000324932 AFAP1Q8N556 730 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 ZNF830Q96NB3 372 aaPredicted RBP16.71■□□□□ 0.27
NUP98-201ENST00000324932 SPAG5Q96R06 1193 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 COMMD10Q9Y6G5 202 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 TTC22Q5TAA0 569 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 PANK2Q9BZ23 570 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
NUP98-201ENST00000324932 CRACR2BQ8N4Y2 399 aaPredicted RBP16.71■□□□□ 0.27
NUP98-201ENST00000324932 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.27
NUP98-201ENST00000324932 CEP83Q9Y592 693 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 GAPVD1Q14C86 1478 aa16.71■□□□□ 0.27
NUP98-201ENST00000324932 TRIM27P14373 513 aa16.71■□□□□ 0.26
NUP98-201ENST00000324932 TAF7Q15545 349 aaPredicted RBP16.71■□□□□ 0.26
NUP98-201ENST00000324932 CEP57Q86XR8 500 aa16.71■□□□□ 0.26
NUP98-201ENST00000324932 SCLT1Q96NL6 688 aa16.71■□□□□ 0.26
NUP98-201ENST00000324932 CTAGE9A4FU28 777 aa16.7■□□□□ 0.26
NUP98-201ENST00000324932 CCDC129Q6ZRS4 1044 aa16.7■□□□□ 0.26
NUP98-201ENST00000324932 MRPS27Q92552 414 aaKnown RBP16.7■□□□□ 0.26
NUP98-201ENST00000324932 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.7■□□□□ 0.26
NUP98-201ENST00000324932 V9GYY5 206 aaPredicted RBP16.7■□□□□ 0.26
NUP98-201ENST00000324932 DDX46Q7L014 1031 aaKnown RBP16.7■□□□□ 0.26
NUP98-201ENST00000324932 MCM10Q7L590 875 aa16.7■□□□□ 0.26
NUP98-201ENST00000324932 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.26
NUP98-201ENST00000324932 KRT83P78385 493 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 IFIT5Q13325 482 aaKnown RBP16.69■□□□□ 0.26
NUP98-201ENST00000324932 SLC5A1P13866 664 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 EXOC1Q9NV70 894 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 OGFRQ9NZT2 677 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 TMEM67Q5HYA8 995 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 RRAGBQ5VZM2 374 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
NUP98-201ENST00000324932 MYD88Q99836 296 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 LARP6Q9BRS8 491 aaKnown RBP16.69■□□□□ 0.26
NUP98-201ENST00000324932 ISM2Q6H9L7 571 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 DDX23Q9BUQ8 820 aaKnown RBP16.69■□□□□ 0.26
NUP98-201ENST00000324932 ATAD2BQ9ULI0 1458 aa16.69■□□□□ 0.26
NUP98-201ENST00000324932 DZIP1Q86YF9 867 aaKnown RBP16.69■□□□□ 0.26
NUP98-201ENST00000324932 ARHGAP5Q13017 1502 aa16.68■□□□□ 0.26
NUP98-201ENST00000324932 NBPF7P0C2Y1 421 aaPredicted RBP16.68■□□□□ 0.26
NUP98-201ENST00000324932 SYT1P21579 422 aa16.68■□□□□ 0.26
NUP98-201ENST00000324932 CCDC160A6NGH7 325 aa16.68■□□□□ 0.26
NUP98-201ENST00000324932 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
NUP98-201ENST00000324932 RASSF4Q9H2L5 321 aa16.68■□□□□ 0.26
NUP98-201ENST00000324932 KRT86O43790 486 aa16.68■□□□□ 0.26
NUP98-201ENST00000324932 TBC1D5Q92609 795 aa16.68■□□□□ 0.26
NUP98-201ENST00000324932 MIS18AQ9NYP9 233 aa16.68■□□□□ 0.26
NUP98-201ENST00000324932 SEPT6Q14141 434 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 LMBR1Q8WVP7 490 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 RSRC1Q96IZ7 334 aaKnown RBP16.67■□□□□ 0.26
NUP98-201ENST00000324932 SERPINA10Q9UK55 444 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 ATP2A1O14983 1001 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 CYB5RLQ6IPT4 315 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 CCDC114Q96M63 670 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 CFTRP13569 1480 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 SNX21Q969T3 373 aa16.67■□□□□ 0.26
NUP98-201ENST00000324932 VPS18Q9P253 973 aa16.66■□□□□ 0.26
NUP98-201ENST00000324932 F6X3S4 739 aa16.66■□□□□ 0.26
NUP98-201ENST00000324932 TTC12Q9H892 705 aaPredicted RBP16.66■□□□□ 0.26
NUP98-201ENST00000324932 STIM2Q9P246 746 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms