RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 LSG1Q9H089 658 aaKnown RBP17.78■□□□□ 0.44
TFE3-201ENST00000315869 BOLA2Q9H3K6 86 aa17.78■□□□□ 0.44
TFE3-201ENST00000315869 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
TFE3-201ENST00000315869 NAP1L2Q9ULW6 460 aaPredicted RBP17.78■□□□□ 0.44
TFE3-201ENST00000315869 FGD1P98174 961 aa17.78■□□□□ 0.44
TFE3-201ENST00000315869 NFATC2IPQ8NCF5 419 aa17.78■□□□□ 0.44
TFE3-201ENST00000315869 TFIP11Q9UBB9 837 aaKnown RBP17.78■□□□□ 0.44
TFE3-201ENST00000315869 EIF4A1P60842 406 aaKnown RBP17.78■□□□□ 0.44
TFE3-201ENST00000315869 MAP3K2Q9Y2U5 619 aa17.78■□□□□ 0.44
TFE3-201ENST00000315869 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
TFE3-201ENST00000315869 G3BP1Q13283 466 aaKnown RBP eCLIP17.77■□□□□ 0.44
TFE3-201ENST00000315869 AKAP4Q5JQC9 854 aa17.77■□□□□ 0.44
TFE3-201ENST00000315869 FSD1Q9BTV5 496 aa17.77■□□□□ 0.44
TFE3-201ENST00000315869 MYL6BP14649 208 aa17.77■□□□□ 0.43
TFE3-201ENST00000315869 NOLC1Q14978 699 aaKnown RBP eCLIP17.77■□□□□ 0.43
TFE3-201ENST00000315869 PRDM10Q9NQV6 1147 aa17.77■□□□□ 0.43
TFE3-201ENST00000315869 ECHDC1Q9NTX5 307 aa17.77■□□□□ 0.43
TFE3-201ENST00000315869 STRCP1A6NGW2 1772 aa17.77■□□□□ 0.43
TFE3-201ENST00000315869 CKAP2LQ8IYA6 745 aa17.76■□□□□ 0.43
TFE3-201ENST00000315869 TAOK2Q9UL54 1235 aa17.76■□□□□ 0.43
TFE3-201ENST00000315869 TOM1L2Q6ZVM7 507 aa17.76■□□□□ 0.43
TFE3-201ENST00000315869 FAM227BQ96M60 508 aa17.75■□□□□ 0.43
TFE3-201ENST00000315869 ZNF330Q9Y3S2 320 aaPredicted RBP17.75■□□□□ 0.43
TFE3-201ENST00000315869 RBM8AQ9Y5S9 174 aaKnown RBP17.75■□□□□ 0.43
TFE3-201ENST00000315869 TATP17735 454 aaPredicted RBP17.74■□□□□ 0.43
TFE3-201ENST00000315869 DYNC1I1O14576 645 aa17.74■□□□□ 0.43
TFE3-201ENST00000315869 LETM1O95202 739 aaPredicted RBP17.74■□□□□ 0.43
TFE3-201ENST00000315869 CEBPZQ03701 1054 aaKnown RBP17.74■□□□□ 0.43
TFE3-201ENST00000315869 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
TFE3-201ENST00000315869 HSP90B1P14625 803 aaKnown RBP17.73■□□□□ 0.43
TFE3-201ENST00000315869 KLHDC4Q8TBB5 520 aa17.73■□□□□ 0.43
TFE3-201ENST00000315869 MAP7D2Q96T17 732 aa17.73■□□□□ 0.43
TFE3-201ENST00000315869 RPAP1Q9BWH6 1393 aaPredicted RBP17.73■□□□□ 0.43
TFE3-201ENST00000315869 AOX1Q06278 1338 aa17.73■□□□□ 0.43
TFE3-201ENST00000315869 CHAF1AQ13111 956 aaPredicted RBP17.73■□□□□ 0.43
TFE3-201ENST00000315869 ME3Q16798 604 aa17.73■□□□□ 0.43
TFE3-201ENST00000315869 HYPKQ9NX55 129 aa17.73■□□□□ 0.43
TFE3-201ENST00000315869 KAT6BQ8WYB5 2073 aa17.73■□□□□ 0.43
TFE3-201ENST00000315869 PPFIA3O75145 1194 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 BICD2Q8TD16 824 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 TTC14Q96N46 770 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 SPATA31A3Q5VYP0 1347 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 KDM4AO75164 1064 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 CCDC192P0DO97 292 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 TERF1P54274 439 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 KRT85P78386 507 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 POLA2Q14181 598 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 UVSSAQ2YD98 709 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 MTMR6Q9Y217 621 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 NMIQ13287 307 aaPredicted RBP17.72■□□□□ 0.43
TFE3-201ENST00000315869 AMOTQ4VCS5 1084 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 TCHHQ07283 1943 aa17.72■□□□□ 0.43
TFE3-201ENST00000315869 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
TFE3-201ENST00000315869 EDC3Q96F86 508 aaKnown RBP17.7■□□□□ 0.42
TFE3-201ENST00000315869 DDX11Q96FC9 970 aa17.7■□□□□ 0.42
TFE3-201ENST00000315869 ZSCAN31Q96LW9 406 aaPredicted RBP17.7■□□□□ 0.42
TFE3-201ENST00000315869 DBF4Q9UBU7 674 aaPredicted RBP17.7■□□□□ 0.42
TFE3-201ENST00000315869 CREB3L3Q68CJ9 461 aa17.7■□□□□ 0.42
TFE3-201ENST00000315869 NUP62CLQ9H1M0 184 aa17.7■□□□□ 0.42
TFE3-201ENST00000315869 NDUFB9Q9Y6M9 179 aa17.7■□□□□ 0.42
TFE3-201ENST00000315869 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
TFE3-201ENST00000315869 CYP27B1O15528 508 aa17.7■□□□□ 0.42
TFE3-201ENST00000315869 FBXW7Q969H0 707 aa17.7■□□□□ 0.42
TFE3-201ENST00000315869 EVA1CP58658 441 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 CDC37L1Q7L3B6 337 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 TNMDQ9H2S6 317 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 SH2B1Q9NRF2 756 aaPredicted RBP17.69■□□□□ 0.42
TFE3-201ENST00000315869 GOLGA6L6A8MZA4 724 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 PIBF1Q8WXW3 757 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 EVI5LQ96CN4 794 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 TRIM5Q9C035 493 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 TPCN1Q9ULQ1 816 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 PTCD1O75127 700 aaKnown RBP17.69■□□□□ 0.42
TFE3-201ENST00000315869 VPS53Q5VIR6 699 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 LUZP1Q86V48 1076 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
TFE3-201ENST00000315869 H3BQV1 296 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 MAP3K11Q16584 847 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 IFFO2Q5TF58 517 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 SPATA32Q96LK8 384 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 DNAJC2Q99543 621 aaKnown RBP17.68■□□□□ 0.42
TFE3-201ENST00000315869 CHMP4AQ9BY43 222 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 CEMIPQ8WUJ3 1361 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 PSMA5P28066 241 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 LARP1Q6PKG0 1096 aaKnown RBP17.68■□□□□ 0.42
TFE3-201ENST00000315869 ERC1Q8IUD2 1116 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 DACT1Q9NYF0 836 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 GIGYF1O75420 1035 aaPredicted RBP17.68■□□□□ 0.42
TFE3-201ENST00000315869 LIG1P18858 919 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 ZNF496Q96IT1 587 aaPredicted RBP17.68■□□□□ 0.42
TFE3-201ENST00000315869 LRRC2Q9BYS8 371 aa17.68■□□□□ 0.42
TFE3-201ENST00000315869 TLR7Q9NYK1 1049 aaKnown RBP17.68■□□□□ 0.42
TFE3-201ENST00000315869 TTC41PQ6P2S7 1318 aa17.67■□□□□ 0.42
TFE3-201ENST00000315869 PHKG2P15735 406 aa17.67■□□□□ 0.42
TFE3-201ENST00000315869 COL9A3Q14050 684 aaPredicted RBP17.67■□□□□ 0.42
TFE3-201ENST00000315869 TTC6Q86TZ1 520 aa17.67■□□□□ 0.42
TFE3-201ENST00000315869 EAF2Q96CJ1 260 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms