RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 DDIT3P35638 169 aa22.37■■□□□ 1.17
CCDC43-201ENST00000315286 TLR7Q9NYK1 1049 aaKnown RBP22.37■■□□□ 1.17
CCDC43-201ENST00000315286 ISCA1Q9BUE6 129 aa22.36■■□□□ 1.17
CCDC43-201ENST00000315286 TCIRG1Q13488 830 aa22.35■■□□□ 1.17
CCDC43-201ENST00000315286 DDB1Q16531 1140 aa22.35■■□□□ 1.17
CCDC43-201ENST00000315286 CYP19A1P11511 503 aaPredicted RBP22.34■■□□□ 1.17
CCDC43-201ENST00000315286 SPATA31A5Q5VU36 1347 aa22.34■■□□□ 1.17
CCDC43-201ENST00000315286 SPATA31A7Q8IWB4 1347 aa22.34■■□□□ 1.17
CCDC43-201ENST00000315286 DOT1LQ8TEK3 1739 aa22.34■■□□□ 1.17
CCDC43-201ENST00000315286 SGSM2O43147 1006 aa22.34■■□□□ 1.17
CCDC43-201ENST00000315286 KIF6Q6ZMV9 814 aa22.34■■□□□ 1.17
CCDC43-201ENST00000315286 PALD1Q9ULE6 856 aa22.34■■□□□ 1.17
CCDC43-201ENST00000315286 CHMP3Q9Y3E7 222 aa22.34■■□□□ 1.17
CCDC43-201ENST00000315286 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.17
CCDC43-201ENST00000315286 MCCP23508 829 aa22.33■■□□□ 1.17
CCDC43-201ENST00000315286 TFCP2Q12800 502 aa22.33■■□□□ 1.17
CCDC43-201ENST00000315286 FOXD4L1Q9NU39 408 aa22.33■■□□□ 1.17
CCDC43-201ENST00000315286 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.33■■□□□ 1.16
CCDC43-201ENST00000315286 DEKP35659 375 aaKnown RBP22.32■■□□□ 1.16
CCDC43-201ENST00000315286 CWC27Q6UX04 472 aaKnown RBP22.32■■□□□ 1.16
CCDC43-201ENST00000315286 ARXQ96QS3 562 aa22.32■■□□□ 1.16
CCDC43-201ENST00000315286 EVI5LQ96CN4 794 aa22.32■■□□□ 1.16
CCDC43-201ENST00000315286 EPB41L2O43491 1005 aaKnown RBP22.31■■□□□ 1.16
CCDC43-201ENST00000315286 ST18O60284 1047 aa22.31■■□□□ 1.16
CCDC43-201ENST00000315286 TRIM28Q13263 835 aaKnown RBP22.31■■□□□ 1.16
CCDC43-201ENST00000315286 CCDC9Q9Y3X0 531 aaKnown RBP22.31■■□□□ 1.16
CCDC43-201ENST00000315286 SLIT2O94813 1529 aa22.31■■□□□ 1.16
CCDC43-201ENST00000315286 TNNI3KQ59H18 835 aa22.3■■□□□ 1.16
CCDC43-201ENST00000315286 MARCH10Q8NA82 808 aaPredicted RBP22.3■■□□□ 1.16
CCDC43-201ENST00000315286 FPGT-TNNI3KV9GXZ4 949 aa22.3■■□□□ 1.16
CCDC43-201ENST00000315286 MAP3K15Q6ZN16 1313 aa22.3■■□□□ 1.16
CCDC43-201ENST00000315286 NWD2Q9ULI1 1742 aa22.3■■□□□ 1.16
CCDC43-201ENST00000315286 ANAPC15P60006 121 aa22.3■■□□□ 1.16
CCDC43-201ENST00000315286 BOLA2Q9H3K6 86 aa22.3■■□□□ 1.16
CCDC43-201ENST00000315286 DIAPH3Q9NSV4 1193 aa22.3■■□□□ 1.16
CCDC43-201ENST00000315286 DBNLQ9UJU6 430 aaKnown RBP22.29■■□□□ 1.16
CCDC43-201ENST00000315286 ZBTB1Q9Y2K1 713 aa22.29■■□□□ 1.16
CCDC43-201ENST00000315286 UBAP1LF5GYI3 381 aa22.29■■□□□ 1.16
CCDC43-201ENST00000315286 HLFQ16534 295 aa22.29■■□□□ 1.16
CCDC43-201ENST00000315286 ACSBG1Q96GR2 724 aa22.29■■□□□ 1.16
CCDC43-201ENST00000315286 HSPA4P34932 840 aa22.28■■□□□ 1.16
CCDC43-201ENST00000315286 GIGYF2Q6Y7W6 1299 aaKnown RBP22.28■■□□□ 1.16
CCDC43-201ENST00000315286 LSG1Q9H089 658 aaKnown RBP22.28■■□□□ 1.16
CCDC43-201ENST00000315286 CIZ1Q9ULV3 898 aaPredicted RBP22.28■■□□□ 1.16
CCDC43-201ENST00000315286 A0A0G2JS52 829 aa22.27■■□□□ 1.16
CCDC43-201ENST00000315286 NEK4P51957 841 aa22.27■■□□□ 1.16
CCDC43-201ENST00000315286 BARGINQ6ZT62 677 aa22.27■■□□□ 1.16
CCDC43-201ENST00000315286 ATG9AQ7Z3C6 839 aa22.27■■□□□ 1.16
CCDC43-201ENST00000315286 IL17RAQ96F46 866 aa22.27■■□□□ 1.16
CCDC43-201ENST00000315286 RAD50Q92878 1312 aa22.27■■□□□ 1.16
CCDC43-201ENST00000315286 RUFY2Q8WXA3 655 aa22.26■■□□□ 1.15
CCDC43-201ENST00000315286 FAM89AQ96GI7 184 aa22.26■■□□□ 1.15
CCDC43-201ENST00000315286 PCCAP05165 728 aaPredicted RBP22.26■■□□□ 1.15
CCDC43-201ENST00000315286 KIAA1211Q6ZU35 1233 aa22.26■■□□□ 1.15
CCDC43-201ENST00000315286 ZNF594Q96JF6 807 aaPredicted RBP22.26■■□□□ 1.15
CCDC43-201ENST00000315286 ATP5JP18859 108 aa22.24■■□□□ 1.15
CCDC43-201ENST00000315286 ZBTB38Q8NAP3 1195 aaPredicted RBP22.24■■□□□ 1.15
CCDC43-201ENST00000315286 DBNDD2Q9BQY9 259 aa22.24■■□□□ 1.15
CCDC43-201ENST00000315286 GPTP24298 496 aa22.24■■□□□ 1.15
CCDC43-201ENST00000315286 IL6STP40189 918 aaPredicted RBP22.23■■□□□ 1.15
CCDC43-201ENST00000315286 LRRC24Q50LG9 513 aa22.23■■□□□ 1.15
CCDC43-201ENST00000315286 EYA2O00167 538 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 MCM4P33991 863 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 IL15P40933 162 aaPredicted RBP22.22■■□□□ 1.15
CCDC43-201ENST00000315286 NLRP10Q86W26 655 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 HIP1O00291 1037 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 RAB3GAP1Q15042 981 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 HSP90AB3PQ58FF7 597 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 SYNE4Q8N205 404 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 EDC3Q96F86 508 aaKnown RBP22.22■■□□□ 1.15
CCDC43-201ENST00000315286 FAM227BQ96M60 508 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 FSD1Q9BTV5 496 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 PLA2G12BQ9BX93 195 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 TBC1D2BQ9UPU7 963 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 NUP98P52948 1817 aa22.22■■□□□ 1.15
CCDC43-201ENST00000315286 PTH1RQ03431 593 aa22.21■■□□□ 1.15
CCDC43-201ENST00000315286 NMIQ13287 307 aaPredicted RBP22.21■■□□□ 1.15
CCDC43-201ENST00000315286 PUS3Q9BZE2 481 aaKnown RBP22.21■■□□□ 1.15
CCDC43-201ENST00000315286 CCDC57Q2TAC2 916 aa22.21■■□□□ 1.15
CCDC43-201ENST00000315286 DZIP3Q86Y13 1208 aaKnown RBP22.21■■□□□ 1.15
CCDC43-201ENST00000315286 TNPO1Q92973 898 aaKnown RBP22.21■■□□□ 1.15
CCDC43-201ENST00000315286 NGLY1Q96IV0 654 aa22.21■■□□□ 1.15
CCDC43-201ENST00000315286 C8orf37Q96NL8 207 aa22.21■■□□□ 1.15
CCDC43-201ENST00000315286 UPF3BQ9BZI7 483 aaKnown RBP22.21■■□□□ 1.15
CCDC43-201ENST00000315286 SNX14Q9Y5W7 946 aa22.21■■□□□ 1.15
CCDC43-201ENST00000315286 ANKRD36CQ5JPF3 1778 aa22.2■■□□□ 1.14
CCDC43-201ENST00000315286 CIAO1O76071 339 aa22.2■■□□□ 1.14
CCDC43-201ENST00000315286 ATP6V1AP38606 617 aa22.2■■□□□ 1.14
CCDC43-201ENST00000315286 INTS5Q6P9B9 1019 aaKnown RBP22.2■■□□□ 1.14
CCDC43-201ENST00000315286 CCDC85AQ96PX6 553 aaPredicted RBP22.2■■□□□ 1.14
CCDC43-201ENST00000315286 GPR108Q9NPR9 543 aa22.2■■□□□ 1.14
CCDC43-201ENST00000315286 LOC102724428A0A0B4J2F2 783 aa22.19■■□□□ 1.14
CCDC43-201ENST00000315286 ERVV-1B6SEH8 477 aa22.19■■□□□ 1.14
CCDC43-201ENST00000315286 CSF1RP07333 972 aa22.19■■□□□ 1.14
CCDC43-201ENST00000315286 SIK1P57059 783 aa22.19■■□□□ 1.14
CCDC43-201ENST00000315286 TIMM10P62072 90 aa22.19■■□□□ 1.14
CCDC43-201ENST00000315286 FAM98CQ17RN3 349 aaKnown RBP22.19■■□□□ 1.14
CCDC43-201ENST00000315286 RASEFQ8IZ41 740 aa22.19■■□□□ 1.14
CCDC43-201ENST00000315286 NEUROD6Q96NK8 337 aa22.19■■□□□ 1.14
CCDC43-201ENST00000315286 MCM2P49736 904 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms