RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 GNAT3A8MTJ3 354 aa22.57■■□□□ 1.2
HERPUD2-201ENST00000311350 GIMAP6Q6P9H5 292 aa22.57■■□□□ 1.2
HERPUD2-201ENST00000311350 EP400Q96L91 3159 aa22.57■■□□□ 1.2
HERPUD2-201ENST00000311350 PNMA6EA0A0J9YXQ4 647 aa22.57■■□□□ 1.2
HERPUD2-201ENST00000311350 EVA1CP58658 441 aa22.57■■□□□ 1.2
HERPUD2-201ENST00000311350 KLHL34Q8N239 644 aa22.57■■□□□ 1.2
HERPUD2-201ENST00000311350 KCNH5Q8NCM2 988 aa22.56■■□□□ 1.2
HERPUD2-201ENST00000311350 SSH3Q8TE77 659 aa22.56■■□□□ 1.2
HERPUD2-201ENST00000311350 CAMTA1Q9Y6Y1 1673 aa22.56■■□□□ 1.2
HERPUD2-201ENST00000311350 A0A0G2JS52 829 aa22.56■■□□□ 1.2
HERPUD2-201ENST00000311350 AMPHP49418 695 aa22.56■■□□□ 1.2
HERPUD2-201ENST00000311350 CGNQ9P2M7 1197 aaKnown RBP22.56■■□□□ 1.2
HERPUD2-201ENST00000311350 MAP3K5Q99683 1374 aa22.55■■□□□ 1.2
HERPUD2-201ENST00000311350 SPATA31A1Q5TZJ5 1347 aa22.55■■□□□ 1.2
HERPUD2-201ENST00000311350 NAA30Q147X3 362 aaPredicted RBP22.55■■□□□ 1.2
HERPUD2-201ENST00000311350 ZNF771Q7L3S4 317 aaPredicted RBP22.55■■□□□ 1.2
HERPUD2-201ENST00000311350 BCL11BQ9C0K0 894 aaPredicted RBP22.55■■□□□ 1.2
HERPUD2-201ENST00000311350 ANO2Q9NQ90 1003 aa22.55■■□□□ 1.2
HERPUD2-201ENST00000311350 DIAPH3Q9NSV4 1193 aa22.55■■□□□ 1.2
HERPUD2-201ENST00000311350 LMO7Q8WWI1 1683 aa22.55■■□□□ 1.2
HERPUD2-201ENST00000311350 CTIFO43310 598 aaKnown RBP22.54■■□□□ 1.2
HERPUD2-201ENST00000311350 LARP6Q9BRS8 491 aaKnown RBP22.54■■□□□ 1.2
HERPUD2-201ENST00000311350 TMEM51Q9NW97 253 aa22.54■■□□□ 1.2
HERPUD2-201ENST00000311350 HSPA4P34932 840 aa22.54■■□□□ 1.2
HERPUD2-201ENST00000311350 SOX12O15370 315 aa22.53■■□□□ 1.2
HERPUD2-201ENST00000311350 CHAF1AQ13111 956 aaPredicted RBP22.53■■□□□ 1.2
HERPUD2-201ENST00000311350 LRRFIP2Q9Y608 721 aaKnown RBP22.53■■□□□ 1.2
HERPUD2-201ENST00000311350 TRIM6-TRIM34B2RNG4 842 aa22.53■■□□□ 1.2
HERPUD2-201ENST00000311350 NCBP1Q09161 790 aaKnown RBP22.53■■□□□ 1.2
HERPUD2-201ENST00000311350 POLA2Q14181 598 aa22.53■■□□□ 1.2
HERPUD2-201ENST00000311350 TAF7Q15545 349 aaPredicted RBP22.53■■□□□ 1.2
HERPUD2-201ENST00000311350 CHMP4AQ9BY43 222 aa22.53■■□□□ 1.2
HERPUD2-201ENST00000311350 WDR33Q9C0J8 1336 aaKnown RBP22.53■■□□□ 1.2
HERPUD2-201ENST00000311350 TMEM87AQ8NBN3 555 aa22.52■■□□□ 1.2
HERPUD2-201ENST00000311350 RILPL2Q969X0 211 aa22.52■■□□□ 1.2
HERPUD2-201ENST00000311350 USP44Q9H0E7 712 aa22.52■■□□□ 1.2
HERPUD2-201ENST00000311350 RPAP1Q9BWH6 1393 aaPredicted RBP22.52■■□□□ 1.2
HERPUD2-201ENST00000311350 UBTFL1P0CB47 393 aaPredicted RBP22.52■■□□□ 1.2
HERPUD2-201ENST00000311350 LARP1Q6PKG0 1096 aaKnown RBP22.52■■□□□ 1.2
HERPUD2-201ENST00000311350 KRT27Q7Z3Y8 459 aa22.51■■□□□ 1.19
HERPUD2-201ENST00000311350 ARHGEF25Q86VW2 580 aa22.51■■□□□ 1.19
HERPUD2-201ENST00000311350 FUCA2Q9BTY2 467 aa22.51■■□□□ 1.19
HERPUD2-201ENST00000311350 FIBPO43427 364 aa22.51■■□□□ 1.19
HERPUD2-201ENST00000311350 COL5A2P05997 1499 aaPredicted RBP22.51■■□□□ 1.19
HERPUD2-201ENST00000311350 IL25Q9H293 177 aa22.5■■□□□ 1.19
HERPUD2-201ENST00000311350 HOXB7P09629 217 aa22.49■■□□□ 1.19
HERPUD2-201ENST00000311350 NFAT5O94916 1531 aa22.49■■□□□ 1.19
HERPUD2-201ENST00000311350 PTGS1P23219 599 aa22.49■■□□□ 1.19
HERPUD2-201ENST00000311350 HOXC9P31274 260 aa22.49■■□□□ 1.19
HERPUD2-201ENST00000311350 OGFRQ9NZT2 677 aa22.49■■□□□ 1.19
HERPUD2-201ENST00000311350 RAD50Q92878 1312 aa22.49■■□□□ 1.19
HERPUD2-201ENST00000311350 BRWD3Q6RI45 1802 aa22.48■■□□□ 1.19
HERPUD2-201ENST00000311350 IL17REQ8NFR9 667 aa22.48■■□□□ 1.19
HERPUD2-201ENST00000311350 USP42Q9H9J4 1324 aaKnown RBP22.48■■□□□ 1.19
HERPUD2-201ENST00000311350 CCDC125Q86Z20 511 aa22.47■■□□□ 1.19
HERPUD2-201ENST00000311350 KIF1BPQ96EK5 621 aa22.47■■□□□ 1.19
HERPUD2-201ENST00000311350 CTNNA3Q9UI47 895 aa22.47■■□□□ 1.19
HERPUD2-201ENST00000311350 VGLL3A8MV65 326 aa22.47■■□□□ 1.19
HERPUD2-201ENST00000311350 UBE2HP62256 183 aa22.47■■□□□ 1.19
HERPUD2-201ENST00000311350 PI4K2BQ8TCG2 481 aa22.47■■□□□ 1.19
HERPUD2-201ENST00000311350 FEZ1Q99689 392 aa22.47■■□□□ 1.19
HERPUD2-201ENST00000311350 AXIN2Q9Y2T1 843 aa22.47■■□□□ 1.19
HERPUD2-201ENST00000311350 THSD7AQ9UPZ6 1657 aa22.46■■□□□ 1.19
HERPUD2-201ENST00000311350 SGSM2O43147 1006 aa22.46■■□□□ 1.19
HERPUD2-201ENST00000311350 LRMPQ12912 555 aa22.46■■□□□ 1.19
HERPUD2-201ENST00000311350 BARGINQ6ZT62 677 aa22.46■■□□□ 1.19
HERPUD2-201ENST00000311350 C16orf45Q96MC5 204 aaPredicted RBP22.46■■□□□ 1.19
HERPUD2-201ENST00000311350 HSP90AB4PQ58FF6 505 aa22.46■■□□□ 1.19
HERPUD2-201ENST00000311350 CEMIPQ8WUJ3 1361 aa22.45■■□□□ 1.18
HERPUD2-201ENST00000311350 ZSCAN22P10073 491 aaPredicted RBP22.45■■□□□ 1.18
HERPUD2-201ENST00000311350 RHPN1Q8TCX5 695 aa22.45■■□□□ 1.18
HERPUD2-201ENST00000311350 THRAP3Q9Y2W1 955 aaKnown RBP22.45■■□□□ 1.18
HERPUD2-201ENST00000311350 PDE4CQ08493 712 aa22.44■■□□□ 1.18
HERPUD2-201ENST00000311350 HDGFL1Q5TGJ6 251 aa22.44■■□□□ 1.18
HERPUD2-201ENST00000311350 CNTROBQ8N137 903 aa22.44■■□□□ 1.18
HERPUD2-201ENST00000311350 TTC14Q96N46 770 aa22.44■■□□□ 1.18
HERPUD2-201ENST00000311350 COL18A1P39060 1754 aa22.44■■□□□ 1.18
HERPUD2-201ENST00000311350 SLFN14P0C7P3 912 aa22.43■■□□□ 1.18
HERPUD2-201ENST00000311350 SYT1P21579 422 aa22.43■■□□□ 1.18
HERPUD2-201ENST00000311350 PPP1R42Q7Z4L9 355 aa22.43■■□□□ 1.18
HERPUD2-201ENST00000311350 NRBP1Q9UHY1 535 aa22.43■■□□□ 1.18
HERPUD2-201ENST00000311350 LSG1Q9H089 658 aaKnown RBP22.42■■□□□ 1.18
HERPUD2-201ENST00000311350 TTC41PQ6P2S7 1318 aa22.42■■□□□ 1.18
HERPUD2-201ENST00000311350 WDR17Q8IZU2 1322 aa22.42■■□□□ 1.18
HERPUD2-201ENST00000311350 TOM1L2Q6ZVM7 507 aa22.41■■□□□ 1.18
HERPUD2-201ENST00000311350 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.41■■□□□ 1.18
HERPUD2-201ENST00000311350 SNX14Q9Y5W7 946 aa22.41■■□□□ 1.18
HERPUD2-201ENST00000311350 STX6O43752 255 aa22.41■■□□□ 1.18
HERPUD2-201ENST00000311350 SURF6O75683 361 aaKnown RBP22.41■■□□□ 1.18
HERPUD2-201ENST00000311350 DNM1Q05193 864 aaKnown RBP22.41■■□□□ 1.18
HERPUD2-201ENST00000311350 CCDC186Q7Z3E2 898 aa22.41■■□□□ 1.18
HERPUD2-201ENST00000311350 CHMP3Q9Y3E7 222 aa22.41■■□□□ 1.18
HERPUD2-201ENST00000311350 ABCC6O95255 1503 aa22.41■■□□□ 1.18
HERPUD2-201ENST00000311350 DDX41Q9UJV9 622 aaKnown RBP22.4■■□□□ 1.18
HERPUD2-201ENST00000311350 IL1RAPL2Q9NP60 686 aa22.4■■□□□ 1.18
HERPUD2-201ENST00000311350 F13A1P00488 732 aa22.39■■□□□ 1.18
HERPUD2-201ENST00000311350 LIMCH1Q9UPQ0 1083 aa22.39■■□□□ 1.18
HERPUD2-201ENST00000311350 ATP6V1DQ9Y5K8 247 aa22.39■■□□□ 1.18
HERPUD2-201ENST00000311350 MTX1Q13505 466 aa22.39■■□□□ 1.17
HERPUD2-201ENST00000311350 FAM182BQ5T319 152 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms