RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CRACR2BQ8N4Y2 399 aaPredicted RBP6.38□□□□□ -1.39
CPSF2-201ENST00000298875 MMRN2Q9H8L6 949 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC196A0A1B0GTZ2 297 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 FERP16591 822 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 MRVI1Q9Y6F6 885 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 A0A1W2PRG0 241 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 ATP2C2O75185 946 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 KIAA1107Q9UPP5 1409 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 CCT2P78371 535 aaKnown RBP6.38□□□□□ -1.39
CPSF2-201ENST00000298875 PROSER2Q86WR7 435 aaPredicted RBP6.38□□□□□ -1.39
CPSF2-201ENST00000298875 TNPO1Q92973 898 aaKnown RBP6.38□□□□□ -1.39
CPSF2-201ENST00000298875 TTC14Q96N46 770 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 PUF60Q9UHX1 559 aaKnown RBP6.38□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC171Q6TFL3 1326 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 FMNL3Q8IVF7 1028 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 EHMT1Q9H9B1 1298 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 IFIT1P09914 478 aaKnown RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 MTIF2P46199 727 aaKnown RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 MRPS9P82933 396 aaKnown RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 CUL5Q93034 780 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 LARP6Q9BRS8 491 aaKnown RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 IKBKGQ9Y6K9 419 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 A0A087WZG4 1122 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC194A0A1B0GVG4 234 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 MNAT1P51948 309 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC82Q8N4S0 544 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 RAB34Q9BZG1 259 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC160A6NGH7 325 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 APBB1IPQ7Z5R6 666 aaPredicted RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 WDR7Q9Y4E6 1490 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 NOP2P46087 812 aaKnown RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 MXRA7P84157 204 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 DDX19AQ9NUU7 478 aaKnown RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 CABP1Q9NZU7 370 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 MYO1BO43795 1136 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 BAG4O95429 457 aaKnown RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 RPAP2Q8IXW5 612 aaPredicted RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 GOLGA8AA7E2F4 631 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC40Q4G0X9 1142 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 CTCFLQ8NI51 663 aaPredicted RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 SH2B1Q9NRF2 756 aaPredicted RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 ABCC2Q92887 1545 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 CAVIN4Q5BKX8 364 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 SREK1Q8WXA9 508 aaKnown RBP6.37□□□□□ -1.39
CPSF2-201ENST00000298875 UHRF1BP1Q6BDS2 1440 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 ADGRL1O94910 1474 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 NEO1Q92859 1461 aa6.37□□□□□ -1.39
CPSF2-201ENST00000298875 PTPN23Q9H3S7 1636 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 POTEDQ86YR6 584 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 KIF1BPQ96EK5 621 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 CALML4Q96GE6 196 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 ZSWIM4Q9H7M6 989 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 PABPN1LA6NDY0 278 aaKnown RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 ZFYP08048 801 aaPredicted RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 MAP3K9P80192 1104 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 ZMYND15Q9H091 742 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 RANBP6O60518 1105 aaKnown RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 DRC1Q96MC2 740 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 KIF4AO95239 1232 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 SLC4A8Q2Y0W8 1093 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 DZIP1Q86YF9 867 aaKnown RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 EXOC1Q9NV70 894 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 EIF4G3O43432 1585 aaKnown RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 FSD2A1L4K1 749 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 CTAGE5O15320 804 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 GLRX3O76003 335 aaKnown RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 CKAP4Q07065 602 aaKnown RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 SPATS2Q86XZ4 545 aaKnown RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 RASSF4Q9H2L5 321 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 SLC12A5Q9H2X9 1139 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 RNF216Q9NWF9 866 aaPredicted RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 TTC31Q49AM3 519 aaPredicted RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 TCHPQ9BT92 498 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 NLRP5P59047 1200 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 KIAA0753Q2KHM9 967 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 SYCP3Q8IZU3 236 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 BOLA2Q9H3K6 86 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 MCM10Q7L590 875 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC155Q8N6L0 562 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 STX6O43752 255 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 AMPD3Q01432 767 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC6Q16204 474 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 TMOD2Q9NZR1 351 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 TACC1O75410 805 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 MYCNP04198 464 aaPredicted RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 NFE2L2Q16236 605 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 ANKS4BQ8N8V4 417 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 TACO1Q9BSH4 297 aaKnown RBP6.36□□□□□ -1.39
CPSF2-201ENST00000298875 GDPD2Q9HCC8 539 aa6.36□□□□□ -1.39
CPSF2-201ENST00000298875 DDX46Q7L014 1031 aaKnown RBP6.35□□□□□ -1.39
CPSF2-201ENST00000298875 SKAP1Q86WV1 359 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 IQCA1Q86XH1 822 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 MYD88Q99836 296 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 KIF21AQ7Z4S6 1674 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 SLFN5Q08AF3 891 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 CATIPQ7Z7H3 387 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 RPRD2Q5VT52 1461 aaKnown RBP6.35□□□□□ -1.39
CPSF2-201ENST00000298875 CLCN1P35523 988 aa6.35□□□□□ -1.39
CPSF2-201ENST00000298875 ZSCAN23Q3MJ62 389 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms