RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 COL25A1Q9BXS0 654 aaPredicted RBP6.53□□□□□ -1.36
CD44-202ENST00000278385 ZCCHC2Q9C0B9 1178 aaKnown RBP6.53□□□□□ -1.36
CD44-202ENST00000278385 CUEDC1Q9NWM3 386 aaPredicted RBP6.53□□□□□ -1.36
CD44-202ENST00000278385 TDRD9Q8NDG6 1382 aaKnown RBP6.53□□□□□ -1.36
CD44-202ENST00000278385 PRDM2Q13029 1718 aa6.53□□□□□ -1.36
CD44-202ENST00000278385 GPR25O00155 361 aa6.52□□□□□ -1.37
CD44-202ENST00000278385 C21orf2O43822 256 aa6.52□□□□□ -1.37
CD44-202ENST00000278385 SMARCA5O60264 1052 aaPredicted RBP6.52□□□□□ -1.37
CD44-202ENST00000278385 EPB42P16452 691 aa6.52□□□□□ -1.37
CD44-202ENST00000278385 ANKRD13AQ8IZ07 590 aa6.52□□□□□ -1.37
CD44-202ENST00000278385 DRC1Q96MC2 740 aa6.52□□□□□ -1.37
CD44-202ENST00000278385 CNTNAP3BQ96NU0 1288 aa6.52□□□□□ -1.37
CD44-202ENST00000278385 CNTNAP3Q9BZ76 1288 aa6.52□□□□□ -1.37
CD44-202ENST00000278385 MBIPQ9NS73 344 aa6.52□□□□□ -1.37
CD44-202ENST00000278385 BCCIPQ9P287 314 aaKnown RBP eCLIP6.52□□□□□ -1.37
CD44-202ENST00000278385 RAD54L2Q9Y4B4 1467 aa6.52□□□□□ -1.37
CD44-202ENST00000278385 ERBB4Q15303 1308 aa6.51□□□□□ -1.37
CD44-202ENST00000278385 BMP4P12644 408 aa6.51□□□□□ -1.37
CD44-202ENST00000278385 MAP2K3P46734 347 aa6.51□□□□□ -1.37
CD44-202ENST00000278385 MAP3K10Q02779 954 aa6.51□□□□□ -1.37
CD44-202ENST00000278385 PSMD1Q99460 953 aa6.51□□□□□ -1.37
CD44-202ENST00000278385 CXXC1Q9P0U4 656 aaPredicted RBP6.51□□□□□ -1.37
CD44-202ENST00000278385 KIAA1522Q9P206 1035 aaPredicted RBP6.51□□□□□ -1.37
CD44-202ENST00000278385 PRR12Q9ULL5 1215 aa6.51□□□□□ -1.37
CD44-202ENST00000278385 FGD5Q6ZNL6 1462 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 DCDC2BA2VCK2 349 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 NCLP19338 710 aaKnown RBP6.5□□□□□ -1.37
CD44-202ENST00000278385 FGFR3P22607 806 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 LAMC2Q13753 1193 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 C11orf91Q3C1V1 193 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 SH3PXD2AQ5TCZ1 1133 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 SAMD5Q5TGI4 173 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 ZNF295-AS1Q8N0V1 137 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 COL26A1Q96A83 441 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 ABHD17AQ96GS6 310 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 SUSD3Q96L08 255 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 MKNK1Q9BUB5 465 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 ENAMQ9NRM1 1142 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 FAM13BQ9NYF5 915 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 CUX1P39880 1505 aa6.5□□□□□ -1.37
CD44-202ENST00000278385 FAM157BP0CG42 384 aa6.49□□□□□ -1.37
CD44-202ENST00000278385 SRSF11Q05519 484 aaKnown RBP6.49□□□□□ -1.37
CD44-202ENST00000278385 FKBP5Q13451 457 aaPredicted RBP6.49□□□□□ -1.37
CD44-202ENST00000278385 C16orf46Q6P387 395 aa6.49□□□□□ -1.37
CD44-202ENST00000278385 TICAM2Q86XR7 235 aa6.49□□□□□ -1.37
CD44-202ENST00000278385 GPR161Q8N6U8 529 aaKnown RBP6.49□□□□□ -1.37
CD44-202ENST00000278385 TTC16Q8NEE8 873 aa6.49□□□□□ -1.37
CD44-202ENST00000278385 MARK1Q9P0L2 795 aa6.49□□□□□ -1.37
CD44-202ENST00000278385 TARBP1Q13395 1621 aaKnown RBP6.49□□□□□ -1.37
CD44-202ENST00000278385 WIPF1O43516 503 aa6.48□□□□□ -1.37
CD44-202ENST00000278385 CLSTN1O94985 981 aa6.48□□□□□ -1.37
CD44-202ENST00000278385 MAPTP10636 758 aaKnown RBP6.48□□□□□ -1.37
CD44-202ENST00000278385 FAM69CQ0P6D2 419 aa6.48□□□□□ -1.37
CD44-202ENST00000278385 DGKZQ13574 1117 aa6.48□□□□□ -1.37
CD44-202ENST00000278385 POTEAQ6S8J7 498 aa6.48□□□□□ -1.37
CD44-202ENST00000278385 SREK1Q8WXA9 508 aaKnown RBP6.48□□□□□ -1.37
CD44-202ENST00000278385 MRRFQ96E11 262 aaKnown RBP6.48□□□□□ -1.37
CD44-202ENST00000278385 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.48□□□□□ -1.37
CD44-202ENST00000278385 WRNQ14191 1432 aaPredicted RBP eCLIP6.48□□□□□ -1.37
CD44-202ENST00000278385 GRIN2BQ13224 1484 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 TGFBR3LH3BV60 316 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 BNIP3LO60238 219 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 NAA30Q147X3 362 aaPredicted RBP6.47□□□□□ -1.37
CD44-202ENST00000278385 OCLNQ16625 522 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 IER5Q5VY09 327 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 ABTB2Q8N961 1025 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 IFT43Q96FT9 208 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 MYO19Q96H55 970 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 HSH2DQ96JZ2 352 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 PNMA5Q96PV4 448 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 BRD7Q9NPI1 651 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 GDF2Q9UK05 429 aaPredicted RBP6.47□□□□□ -1.37
CD44-202ENST00000278385 BRPF3Q9ULD4 1205 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 KCNH4Q9UQ05 1017 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 EIF4G3O43432 1585 aaKnown RBP6.47□□□□□ -1.37
CD44-202ENST00000278385 WDR97A6NE52 1622 aa6.47□□□□□ -1.37
CD44-202ENST00000278385 IGF1RP08069 1367 aa6.46□□□□□ -1.37
CD44-202ENST00000278385 ADAMTS2O95450 1211 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 PCSK2P16519 638 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 TNP2Q05952 138 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 AAMPQ13685 434 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 CYB5RLQ6IPT4 315 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 BTLAQ7Z6A9 289 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 TXNDC2Q86VQ3 553 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 SVOPQ8N4V2 548 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 ZSCAN1Q8NBB4 408 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 KLK14Q9P0G3 267 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 GAPVD1Q14C86 1478 aa6.46□□□□□ -1.38
CD44-202ENST00000278385 ABCA10Q8WWZ4 1543 aa6.45□□□□□ -1.38
CD44-202ENST00000278385 CD33P20138 364 aa6.45□□□□□ -1.38
CD44-202ENST00000278385 ARID4AP29374 1257 aaPredicted RBP6.45□□□□□ -1.38
CD44-202ENST00000278385 ARSDP51689 593 aa6.45□□□□□ -1.38
CD44-202ENST00000278385 FAM182BQ5T319 152 aa6.45□□□□□ -1.38
CD44-202ENST00000278385 GOLGA6L1Q8N7Z2 621 aa6.45□□□□□ -1.38
CD44-202ENST00000278385 SNAPC4Q5SXM2 1469 aa6.45□□□□□ -1.38
CD44-202ENST00000278385 MAGI1Q96QZ7 1491 aaPredicted RBP6.45□□□□□ -1.38
CD44-202ENST00000278385 TMEM88BA6NKF7 163 aa6.44□□□□□ -1.38
CD44-202ENST00000278385 MICAL2O94851 1124 aa6.44□□□□□ -1.38
CD44-202ENST00000278385 ABL1P00519 1130 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms