RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
UPF3B-201ENST00000276201 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
UPF3B-201ENST00000276201 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
UPF3B-201ENST00000276201 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
UPF3B-201ENST00000276201 MSNP26038 577 aaKnown RBP12.61□□□□□ -0.39
UPF3B-201ENST00000276201 PTGER2P43116 358 aa12.61□□□□□ -0.39
UPF3B-201ENST00000276201 ANKRD45Q5TZF3 282 aa12.61□□□□□ -0.39
UPF3B-201ENST00000276201 INTS5Q6P9B9 1019 aaKnown RBP12.61□□□□□ -0.39
UPF3B-201ENST00000276201 SLC16A10Q8TF71 515 aa12.61□□□□□ -0.39
UPF3B-201ENST00000276201 LMBRD1Q9NUN5 540 aa12.61□□□□□ -0.39
UPF3B-201ENST00000276201 VAMP4O75379 141 aa12.6□□□□□ -0.39
UPF3B-201ENST00000276201 ZNF853P0CG23 659 aa12.6□□□□□ -0.39
UPF3B-201ENST00000276201 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
UPF3B-201ENST00000276201 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
UPF3B-201ENST00000276201 IFT57Q9NWB7 429 aa12.6□□□□□ -0.39
UPF3B-201ENST00000276201 RPS6KA4O75676 772 aa12.59□□□□□ -0.39
UPF3B-201ENST00000276201 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
UPF3B-201ENST00000276201 RTCBQ9Y3I0 505 aaKnown RBP12.59□□□□□ -0.39
UPF3B-201ENST00000276201 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
UPF3B-201ENST00000276201 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.4
UPF3B-201ENST00000276201 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
UPF3B-201ENST00000276201 C4AP0C0L4 1744 aa12.58□□□□□ -0.4
UPF3B-201ENST00000276201 GNAI1P63096 354 aa12.58□□□□□ -0.4
UPF3B-201ENST00000276201 ZSCAN23Q3MJ62 389 aa12.58□□□□□ -0.4
UPF3B-201ENST00000276201 MSL1Q68DK7 614 aa12.58□□□□□ -0.4
UPF3B-201ENST00000276201 USP26Q9BXU7 913 aa12.58□□□□□ -0.4
UPF3B-201ENST00000276201 DCTPP1Q9H773 170 aa12.58□□□□□ -0.4
UPF3B-201ENST00000276201 PRAMEF22A3QJZ6 481 aa12.57□□□□□ -0.4
UPF3B-201ENST00000276201 ADRA2BP18089 450 aa12.57□□□□□ -0.4
UPF3B-201ENST00000276201 TTC22Q5TAA0 569 aa12.57□□□□□ -0.4
UPF3B-201ENST00000276201 ZBTB1Q9Y2K1 713 aa12.57□□□□□ -0.4
UPF3B-201ENST00000276201 SOS1Q07889 1333 aaPredicted RBP12.57□□□□□ -0.4
UPF3B-201ENST00000276201 STARD3NLO95772 234 aa12.57□□□□□ -0.4
UPF3B-201ENST00000276201 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
UPF3B-201ENST00000276201 PLEKHM2Q8IWE5 1019 aa12.57□□□□□ -0.4
UPF3B-201ENST00000276201 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
UPF3B-201ENST00000276201 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
UPF3B-201ENST00000276201 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
UPF3B-201ENST00000276201 TSPYL4Q9UJ04 414 aa12.56□□□□□ -0.4
UPF3B-201ENST00000276201 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
UPF3B-201ENST00000276201 GSPT1P15170 499 aaKnown RBP12.56□□□□□ -0.4
UPF3B-201ENST00000276201 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
UPF3B-201ENST00000276201 ZKSCAN5Q9Y2L8 839 aa12.56□□□□□ -0.4
UPF3B-201ENST00000276201 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
UPF3B-201ENST00000276201 LAMB4A4D0S4 1761 aa12.55□□□□□ -0.4
UPF3B-201ENST00000276201 DYNC1I1O14576 645 aa12.55□□□□□ -0.4
UPF3B-201ENST00000276201 BABAM1Q9NWV8 329 aa12.55□□□□□ -0.4
UPF3B-201ENST00000276201 PPP1R1BQ9UD71 204 aaPredicted RBP12.55□□□□□ -0.4
UPF3B-201ENST00000276201 LRSAM1Q6UWE0 723 aa12.55□□□□□ -0.4
UPF3B-201ENST00000276201 IL17RAQ96F46 866 aa12.55□□□□□ -0.4
UPF3B-201ENST00000276201 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
UPF3B-201ENST00000276201 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
UPF3B-201ENST00000276201 COL15A1P39059 1388 aa12.54□□□□□ -0.4
UPF3B-201ENST00000276201 CHL1O00533 1208 aa12.54□□□□□ -0.4
UPF3B-201ENST00000276201 MBD3O95983 291 aa12.54□□□□□ -0.4
UPF3B-201ENST00000276201 A1BGP04217 495 aa12.54□□□□□ -0.4
UPF3B-201ENST00000276201 RFC4P35249 363 aa12.54□□□□□ -0.4
UPF3B-201ENST00000276201 RBSNQ9H1K0 784 aa12.54□□□□□ -0.4
UPF3B-201ENST00000276201 ATP10DQ9P241 1426 aa12.54□□□□□ -0.4
UPF3B-201ENST00000276201 ST18O60284 1047 aa12.54□□□□□ -0.4
UPF3B-201ENST00000276201 POLD1P28340 1107 aa12.54□□□□□ -0.4
UPF3B-201ENST00000276201 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
UPF3B-201ENST00000276201 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
UPF3B-201ENST00000276201 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
UPF3B-201ENST00000276201 GYS1P13807 737 aa12.53□□□□□ -0.4
UPF3B-201ENST00000276201 MCM2P49736 904 aa12.53□□□□□ -0.4
UPF3B-201ENST00000276201 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
UPF3B-201ENST00000276201 RPAP2Q8IXW5 612 aaPredicted RBP12.53□□□□□ -0.4
UPF3B-201ENST00000276201 ANKRD44Q8N8A2 993 aa12.53□□□□□ -0.4
UPF3B-201ENST00000276201 EIF5P55010 431 aaKnown RBP12.52□□□□□ -0.4
UPF3B-201ENST00000276201 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
UPF3B-201ENST00000276201 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
UPF3B-201ENST00000276201 REC8O95072 547 aa12.51□□□□□ -0.41
UPF3B-201ENST00000276201 CAVIN1Q6NZI2 390 aaKnown RBP12.51□□□□□ -0.41
UPF3B-201ENST00000276201 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
UPF3B-201ENST00000276201 IL6STP40189 918 aaPredicted RBP12.51□□□□□ -0.41
UPF3B-201ENST00000276201 NBPF10Q6P3W6 841 aaKnown RBP12.51□□□□□ -0.41
UPF3B-201ENST00000276201 SASS6Q6UVJ0 657 aa12.51□□□□□ -0.41
UPF3B-201ENST00000276201 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
UPF3B-201ENST00000276201 OSBPL3Q9H4L5 887 aa12.51□□□□□ -0.41
UPF3B-201ENST00000276201 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
UPF3B-201ENST00000276201 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
UPF3B-201ENST00000276201 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
UPF3B-201ENST00000276201 GPT2Q8TD30 523 aa12.5□□□□□ -0.41
UPF3B-201ENST00000276201 FHDC1Q9C0D6 1143 aaPredicted RBP12.5□□□□□ -0.41
UPF3B-201ENST00000276201 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
UPF3B-201ENST00000276201 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
UPF3B-201ENST00000276201 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
UPF3B-201ENST00000276201 ZDHHC9Q9Y397 364 aa12.5□□□□□ -0.41
UPF3B-201ENST00000276201 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
UPF3B-201ENST00000276201 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
UPF3B-201ENST00000276201 NLGN1Q8N2Q7 840 aa12.5□□□□□ -0.41
UPF3B-201ENST00000276201 ZNF330Q9Y3S2 320 aaPredicted RBP12.5□□□□□ -0.41
UPF3B-201ENST00000276201 SCN7AQ01118 1682 aa12.5□□□□□ -0.41
UPF3B-201ENST00000276201 ZPR1O75312 459 aa12.49□□□□□ -0.41
UPF3B-201ENST00000276201 MMP10P09238 476 aa12.49□□□□□ -0.41
UPF3B-201ENST00000276201 A0A087WZG4 1122 aa12.49□□□□□ -0.41
UPF3B-201ENST00000276201 CUL4AQ13619 759 aa12.49□□□□□ -0.41
UPF3B-201ENST00000276201 UVSSAQ2YD98 709 aa12.49□□□□□ -0.41
UPF3B-201ENST00000276201 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms