RNA–Protein interactions for RNA: ENST00000265956.8

GAPVD1-201, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-201ENST00000265956 CREB3L3Q68CJ9 461 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 ERC1Q8IUD2 1116 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 DNAJC2Q99543 621 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 TPCN1Q9ULQ1 816 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 F13A1P00488 732 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 MTX1Q13505 466 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 GIMAP6Q6P9H5 292 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 ZNF589Q86UQ0 364 aaPredicted RBP9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 USP25Q9UHP3 1055 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 CCDC171Q6TFL3 1326 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 NEURL1BA8MQ27 555 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 SLFNL1Q499Z3 407 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 CCDC129Q6ZRS4 1044 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 TTC5Q8N0Z6 440 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 ERBB3P21860 1342 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 FOSBP53539 338 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 GCKRQ14397 625 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 NECTIN1Q15223 517 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 LARP1BQ659C4 914 aaKnown RBP9□□□□□ -0.97
GAPVD1-201ENST00000265956 LARP1Q6PKG0 1096 aaKnown RBP9□□□□□ -0.97
GAPVD1-201ENST00000265956 ANKRD13DQ6ZTN6 518 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 PDLIM2Q96JY6 352 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 SLC52A2Q9HAB3 445 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 ADGRL3Q9HAR2 1447 aa9□□□□□ -0.97
GAPVD1-201ENST00000265956 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 SLC27A2O14975 620 aa8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 TATP17735 454 aaPredicted RBP8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 RBM10P98175 930 aaKnown RBP8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 ST3GAL1Q11201 340 aa8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 TFCP2Q12800 502 aa8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 SEC62Q99442 399 aaKnown RBP8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 LRRC2Q9BYS8 371 aa8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 ZSWIM6Q9HCJ5 1215 aa8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 NOL7Q9UMY1 257 aaKnown RBP8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 ZNF330Q9Y3S2 320 aaPredicted RBP8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 NPHP3Q7Z494 1330 aa8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 CAMK4Q16566 473 aa8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 VPS53Q5VIR6 699 aa8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 HDAC5Q9UQL6 1122 aa8.99□□□□□ -0.97
GAPVD1-201ENST00000265956 USP42Q9H9J4 1324 aaKnown RBP8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 A0A087WZG4 1122 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 PHF14O94880 888 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 HSP90AA2PQ14568 343 aaPredicted RBP8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 BLOC1S2Q6QNY1 142 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 DDX46Q7L014 1031 aaKnown RBP8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 CDC37L1Q7L3B6 337 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 NEUROD6Q96NK8 337 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 ARID3AQ99856 593 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 MTMR6Q9Y217 621 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 PHKG2P15735 406 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 CCDC183Q5T5S1 534 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 MAP4K1Q92918 833 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 DBNLQ9UJU6 430 aaKnown RBP8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 ZKSCAN5Q9Y2L8 839 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 PRKCSHP14314 528 aaPredicted RBP8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 UBE2HP62256 183 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 C17orf53Q8N3J3 647 aaPredicted RBP8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 IL17RAQ96F46 866 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 DDX11Q96FC9 970 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 DBNDD2Q9BQY9 259 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 METTL22Q9BUU2 404 aaPredicted RBP8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 NAP1L2Q9ULW6 460 aaPredicted RBP8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 ATP6V1DQ9Y5K8 247 aa8.98□□□□□ -0.97
GAPVD1-201ENST00000265956 KDM3BQ7LBC6 1761 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 CHD2O14647 1828 aaKnown RBP8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 CYP27B1O15528 508 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 EPB41L2O43491 1005 aaKnown RBP8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 OFD1O75665 1012 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 HSP90B1P14625 803 aaKnown RBP8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 ATF3P18847 181 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 FGD1P98174 961 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 DNTTIP2Q5QJE6 756 aaKnown RBP8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 CCDC85AQ96PX6 553 aaPredicted RBP8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 CCDC39Q9UFE4 941 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 MED1Q15648 1581 aaPredicted RBP8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 ADCY5O95622 1261 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 CABP4P57796 275 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 CEBPZQ03701 1054 aaKnown RBP8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 LMBR1LQ6UX01 489 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 IFNL2Q8IZJ0 200 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 TTC12Q9H892 705 aaPredicted RBP8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 TAOK2Q9UL54 1235 aa8.97□□□□□ -0.97
GAPVD1-201ENST00000265956 HEG1Q9ULI3 1381 aa8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 JAK2O60674 1132 aa8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 SNRPA1P09661 255 aaKnown RBP8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 PSMA5P28066 241 aa8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 TIMM10P62072 90 aa8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 RNF20Q5VTR2 975 aa8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 CKAP2LQ8IYA6 745 aa8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 ZSCAN31Q96LW9 406 aaPredicted RBP8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 SH2B1Q9NRF2 756 aaPredicted RBP8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.96□□□□□ -0.97
GAPVD1-201ENST00000265956 RGPD5Q99666 1765 aa8.96□□□□□ -0.98
GAPVD1-201ENST00000265956 HIP1O00291 1037 aa8.96□□□□□ -0.98
GAPVD1-201ENST00000265956 PTPN12Q05209 780 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms