RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 EXOC5O00471 708 aa23.38■■□□□ 1.33
CSPG5-201ENST00000264723 CDK11BP21127 795 aaKnown RBP23.38■■□□□ 1.33
CSPG5-201ENST00000264723 TPM4P67936 248 aa23.38■■□□□ 1.33
CSPG5-201ENST00000264723 SH2B1Q9NRF2 756 aaPredicted RBP23.38■■□□□ 1.33
CSPG5-201ENST00000264723 PTH1RQ03431 593 aa23.38■■□□□ 1.33
CSPG5-201ENST00000264723 ZNF790Q6PG37 636 aa23.38■■□□□ 1.33
CSPG5-201ENST00000264723 BICC1Q9H694 974 aaKnown RBP23.38■■□□□ 1.33
CSPG5-201ENST00000264723 CWC25Q9NXE8 425 aaPredicted RBP23.38■■□□□ 1.33
CSPG5-201ENST00000264723 CFAP74Q9C0B2 1584 aa23.37■■□□□ 1.33
CSPG5-201ENST00000264723 BRF1Q92994 677 aa23.37■■□□□ 1.33
CSPG5-201ENST00000264723 DACT1Q9NYF0 836 aa23.37■■□□□ 1.33
CSPG5-201ENST00000264723 HAND2P61296 217 aa23.37■■□□□ 1.33
CSPG5-201ENST00000264723 INTS4Q96HW7 963 aaKnown RBP23.37■■□□□ 1.33
CSPG5-201ENST00000264723 LRRC7Q96NW7 1537 aa23.37■■□□□ 1.33
CSPG5-201ENST00000264723 KIAA0232Q92628 1395 aa23.36■■□□□ 1.33
CSPG5-201ENST00000264723 PRAMEF22A3QJZ6 481 aa23.36■■□□□ 1.33
CSPG5-201ENST00000264723 LDHAL6AQ6ZMR3 332 aa23.36■■□□□ 1.33
CSPG5-201ENST00000264723 HOMER1Q86YM7 354 aa23.36■■□□□ 1.33
CSPG5-201ENST00000264723 C16orf45Q96MC5 204 aaPredicted RBP23.36■■□□□ 1.33
CSPG5-201ENST00000264723 EIF4A1P60842 406 aaKnown RBP23.36■■□□□ 1.33
CSPG5-201ENST00000264723 CREB3L3Q68CJ9 461 aa23.36■■□□□ 1.33
CSPG5-201ENST00000264723 CCDC129Q6ZRS4 1044 aa23.36■■□□□ 1.33
CSPG5-201ENST00000264723 PTCH1Q13635 1447 aa23.36■■□□□ 1.33
CSPG5-201ENST00000264723 ALDH1L1O75891 902 aa23.35■■□□□ 1.33
CSPG5-201ENST00000264723 SMC2O95347 1197 aa23.35■■□□□ 1.33
CSPG5-201ENST00000264723 ACSBG1Q96GR2 724 aa23.35■■□□□ 1.33
CSPG5-201ENST00000264723 PES1O00541 588 aaKnown RBP23.35■■□□□ 1.33
CSPG5-201ENST00000264723 STK38Q15208 465 aa23.35■■□□□ 1.33
CSPG5-201ENST00000264723 CCAR2Q8N163 923 aaKnown RBP23.35■■□□□ 1.33
CSPG5-201ENST00000264723 UBE2Q2Q8WVN8 375 aa23.35■■□□□ 1.33
CSPG5-201ENST00000264723 ZNF496Q96IT1 587 aaPredicted RBP23.35■■□□□ 1.33
CSPG5-201ENST00000264723 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.35■■□□□ 1.33
CSPG5-201ENST00000264723 DDX21Q9NR30 783 aaKnown RBP eCLIP23.35■■□□□ 1.33
CSPG5-201ENST00000264723 ZDHHC9Q9Y397 364 aa23.35■■□□□ 1.33
CSPG5-201ENST00000264723 DHX16O60231 1041 aaKnown RBP23.35■■□□□ 1.33
CSPG5-201ENST00000264723 ARHGAP31Q2M1Z3 1444 aa23.34■■□□□ 1.33
CSPG5-201ENST00000264723 A2ML1A8K2U0 1454 aa23.34■■□□□ 1.33
CSPG5-201ENST00000264723 HSPA4P34932 840 aa23.34■■□□□ 1.33
CSPG5-201ENST00000264723 CBX1P83916 185 aa23.34■■□□□ 1.33
CSPG5-201ENST00000264723 PROSER3Q2NL68 480 aa23.34■■□□□ 1.33
CSPG5-201ENST00000264723 NOL7Q9UMY1 257 aaKnown RBP23.34■■□□□ 1.33
CSPG5-201ENST00000264723 ADCK5Q3MIX3 580 aa23.33■■□□□ 1.33
CSPG5-201ENST00000264723 ZMYND15Q9H091 742 aa23.33■■□□□ 1.33
CSPG5-201ENST00000264723 HMGN5P82970 282 aaKnown RBP23.33■■□□□ 1.33
CSPG5-201ENST00000264723 NOLC1Q14978 699 aaKnown RBP eCLIP23.33■■□□□ 1.33
CSPG5-201ENST00000264723 ISM2Q6H9L7 571 aa23.33■■□□□ 1.32
CSPG5-201ENST00000264723 AATKQ6ZMQ8 1374 aa23.32■■□□□ 1.32
CSPG5-201ENST00000264723 CCDC82Q8N4S0 544 aa23.32■■□□□ 1.32
CSPG5-201ENST00000264723 CCDC34Q96HJ3 373 aa23.32■■□□□ 1.32
CSPG5-201ENST00000264723 NOL10Q9BSC4 688 aaKnown RBP23.32■■□□□ 1.32
CSPG5-201ENST00000264723 LRP2BPQ9P2M1 347 aa23.32■■□□□ 1.32
CSPG5-201ENST00000264723 LUZP1Q86V48 1076 aa23.32■■□□□ 1.32
CSPG5-201ENST00000264723 PDCL3Q9H2J4 239 aa23.32■■□□□ 1.32
CSPG5-201ENST00000264723 ABCA9Q8IUA7 1624 aa23.32■■□□□ 1.32
CSPG5-201ENST00000264723 A1BGP04217 495 aa23.32■■□□□ 1.32
CSPG5-201ENST00000264723 SSH3Q8TE77 659 aa23.32■■□□□ 1.32
CSPG5-201ENST00000264723 TRMT1Q9NXH9 659 aaKnown RBP23.31■■□□□ 1.32
CSPG5-201ENST00000264723 RAD50Q92878 1312 aa23.31■■□□□ 1.32
CSPG5-201ENST00000264723 SAFBQ15424 915 aaKnown RBP eCLIP23.31■■□□□ 1.32
CSPG5-201ENST00000264723 PPP1R9BQ96SB3 815 aa23.31■■□□□ 1.32
CSPG5-201ENST00000264723 BIN1O00499 593 aa23.31■■□□□ 1.32
CSPG5-201ENST00000264723 KRT32Q14532 448 aa23.31■■□□□ 1.32
CSPG5-201ENST00000264723 RUFY3Q7L099 469 aa23.31■■□□□ 1.32
CSPG5-201ENST00000264723 NUP133Q8WUM0 1156 aa23.31■■□□□ 1.32
CSPG5-201ENST00000264723 SUCLG2Q96I99 432 aa23.31■■□□□ 1.32
CSPG5-201ENST00000264723 NEK1Q96PY6 1258 aa23.31■■□□□ 1.32
CSPG5-201ENST00000264723 USP6P35125 1406 aa23.31■■□□□ 1.32
CSPG5-201ENST00000264723 ZNF165P49910 485 aa23.3■■□□□ 1.32
CSPG5-201ENST00000264723 DCAF5Q96JK2 942 aa23.3■■□□□ 1.32
CSPG5-201ENST00000264723 SCAND2PQ9GZW5 306 aaPredicted RBP23.3■■□□□ 1.32
CSPG5-201ENST00000264723 PLEKHG1Q9ULL1 1385 aa23.3■■□□□ 1.32
CSPG5-201ENST00000264723 PKNOX2Q96KN3 472 aa23.3■■□□□ 1.32
CSPG5-201ENST00000264723 HSP90AB3PQ58FF7 597 aa23.3■■□□□ 1.32
CSPG5-201ENST00000264723 ANO6Q4KMQ2 910 aa23.29■■□□□ 1.32
CSPG5-201ENST00000264723 USP16Q9Y5T5 823 aa23.29■■□□□ 1.32
CSPG5-201ENST00000264723 NLRP1Q9C000 1473 aa23.29■■□□□ 1.32
CSPG5-201ENST00000264723 POLR3DP05423 398 aaPredicted RBP23.29■■□□□ 1.32
CSPG5-201ENST00000264723 RAI14Q9P0K7 980 aa23.29■■□□□ 1.32
CSPG5-201ENST00000264723 IBTKQ9P2D0 1353 aaPredicted RBP23.29■■□□□ 1.32
CSPG5-201ENST00000264723 MARCH6O60337 910 aa23.29■■□□□ 1.32
CSPG5-201ENST00000264723 CCDC186Q7Z3E2 898 aa23.29■■□□□ 1.32
CSPG5-201ENST00000264723 MAP7D2Q96T17 732 aa23.29■■□□□ 1.32
CSPG5-201ENST00000264723 SPDYE4A6NLX3 237 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 TDO2P48775 406 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 TIMM10P62072 90 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 DNAJC25Q9H1X3 360 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 CCDC171Q6TFL3 1326 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 ADGRB1O14514 1584 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 PIBF1Q8WXW3 757 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 IL2RBP14784 551 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 Q6ZUG5 572 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 FAM177A1Q8N128 213 aaPredicted RBP23.28■■□□□ 1.32
CSPG5-201ENST00000264723 TFCP2Q12800 502 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 AIDAQ96BJ3 306 aa23.28■■□□□ 1.32
CSPG5-201ENST00000264723 IQSEC3Q9UPP2 1182 aaPredicted RBP23.28■■□□□ 1.32
CSPG5-201ENST00000264723 LARGE1O95461 756 aa23.27■■□□□ 1.32
CSPG5-201ENST00000264723 NGLY1Q96IV0 654 aa23.27■■□□□ 1.32
CSPG5-201ENST00000264723 OSBPL3Q9H4L5 887 aa23.27■■□□□ 1.32
CSPG5-201ENST00000264723 CFAP45Q9UL16 551 aa23.27■■□□□ 1.32
CSPG5-201ENST00000264723 ATP7BP35670 1465 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms