RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 KAT6BQ8WYB5 2073 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 FHDC1Q9C0D6 1143 aaPredicted RBP7.04□□□□□ -1.28
ITCH-201ENST00000262650 IVNS1ABPQ9Y6Y0 642 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 NSD3Q9BZ95 1437 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 C4AP0C0L4 1744 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 DCAF8L1A6NGE4 600 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
ITCH-201ENST00000262650 PCDH11XQ9BZA7 1347 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 PCDH11YQ9BZA8 1340 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 ZBTB7AO95365 584 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 C11orf96Q7Z7L8 435 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 AMOTL1Q8IY63 956 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 ZNF513Q8N8E2 541 aaPredicted RBP7.03□□□□□ -1.28
ITCH-201ENST00000262650 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 AK7Q96M32 723 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 PPP4R2Q9NY27 417 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.03□□□□□ -1.28
ITCH-201ENST00000262650 TJP1Q07157 1748 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 WASHC2AQ641Q2 1341 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 CFAP69A5D8W1 941 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 PUS10Q3MIT2 529 aaKnown RBP7.03□□□□□ -1.28
ITCH-201ENST00000262650 NBPF5PQ86XG9 351 aaPredicted RBP7.03□□□□□ -1.28
ITCH-201ENST00000262650 CARD14Q9BXL6 1004 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 CEP126Q9P2H0 1117 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 GABBR1Q9UBS5 961 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 NRBP1Q9UHY1 535 aa7.03□□□□□ -1.28
ITCH-201ENST00000262650 ADCY9O60503 1353 aa7.02□□□□□ -1.28
ITCH-201ENST00000262650 LARGE2Q8N3Y3 721 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 ACSBG1Q96GR2 724 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 ZBED9Q6R2W3 1325 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 KDRP35968 1356 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 UBR2Q8IWV8 1755 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 MCM6Q14566 821 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 SKIV2LQ15477 1246 aaKnown RBP7.02□□□□□ -1.29
ITCH-201ENST00000262650 FLAD1Q8NFF5 587 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 POM121Q96HA1 1249 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 NRXN2Q9P2S2 1712 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 DLEC1Q9Y238 1755 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
ITCH-201ENST00000262650 ATF5Q9Y2D1 282 aaPredicted RBP7.02□□□□□ -1.29
ITCH-201ENST00000262650 STK10O94804 968 aaKnown RBP7.01□□□□□ -1.29
ITCH-201ENST00000262650 PRIM1P49642 420 aaKnown RBP7.01□□□□□ -1.29
ITCH-201ENST00000262650 DPH6Q7L8W6 267 aa7.01□□□□□ -1.29
ITCH-201ENST00000262650 SIPA1L3O60292 1781 aaPredicted RBP7.01□□□□□ -1.29
ITCH-201ENST00000262650 COPB2P35606 906 aa7.01□□□□□ -1.29
ITCH-201ENST00000262650 AMPHP49418 695 aa7.01□□□□□ -1.29
ITCH-201ENST00000262650 ZNF784Q8NCA9 323 aaPredicted RBP7.01□□□□□ -1.29
ITCH-201ENST00000262650 BSDC1Q9NW68 430 aaPredicted RBP7.01□□□□□ -1.29
ITCH-201ENST00000262650 CIZ1Q9ULV3 898 aaPredicted RBP7.01□□□□□ -1.29
ITCH-201ENST00000262650 MRC1P22897 1456 aa7.01□□□□□ -1.29
ITCH-201ENST00000262650 SEMA3EO15041 775 aa7□□□□□ -1.29
ITCH-201ENST00000262650 CYP27B1O15528 508 aa7□□□□□ -1.29
ITCH-201ENST00000262650 SMARCC1Q92922 1105 aaPredicted RBP7□□□□□ -1.29
ITCH-201ENST00000262650 TPX2Q9ULW0 747 aaKnown RBP7□□□□□ -1.29
ITCH-201ENST00000262650 CD2APQ9Y5K6 639 aa7□□□□□ -1.29
ITCH-201ENST00000262650 RNF123Q5XPI4 1314 aa7□□□□□ -1.29
ITCH-201ENST00000262650 MYH14Q7Z406 1995 aaKnown RBP7□□□□□ -1.29
ITCH-201ENST00000262650 TATP17735 454 aaPredicted RBP7□□□□□ -1.29
ITCH-201ENST00000262650 MAP2K1Q02750 393 aaPredicted RBP7□□□□□ -1.29
ITCH-201ENST00000262650 SENP7Q9BQF6 1050 aa7□□□□□ -1.29
ITCH-201ENST00000262650 COL23A1Q86Y22 540 aaPredicted RBP6.99□□□□□ -1.29
ITCH-201ENST00000262650 PALLDQ8WX93 1383 aa6.99□□□□□ -1.29
ITCH-201ENST00000262650 WDHD1O75717 1129 aaPredicted RBP6.99□□□□□ -1.29
ITCH-201ENST00000262650 SNRNP27Q8WVK2 155 aaKnown RBP6.99□□□□□ -1.29
ITCH-201ENST00000262650 FBXO9Q9UK97 447 aaPredicted RBP6.99□□□□□ -1.29
ITCH-201ENST00000262650 VGLL3A8MV65 326 aa6.99□□□□□ -1.29
ITCH-201ENST00000262650 PDE4DQ08499 809 aa6.99□□□□□ -1.29
ITCH-201ENST00000262650 ZKSCAN8Q15776 578 aaPredicted RBP6.99□□□□□ -1.29
ITCH-201ENST00000262650 HSP90AB2PQ58FF8 381 aa6.99□□□□□ -1.29
ITCH-201ENST00000262650 BORCS6Q96GS4 357 aa6.99□□□□□ -1.29
ITCH-201ENST00000262650 RAI14Q9P0K7 980 aa6.99□□□□□ -1.29
ITCH-201ENST00000262650 CHPF2Q9P2E5 772 aa6.99□□□□□ -1.29
ITCH-201ENST00000262650 CCNL1Q9UK58 526 aaPredicted RBP6.99□□□□□ -1.29
ITCH-201ENST00000262650 IGSF1Q8N6C5 1336 aa6.99□□□□□ -1.29
ITCH-201ENST00000262650 CARNS1A5YM72 827 aa6.98□□□□□ -1.29
ITCH-201ENST00000262650 RRS1Q15050 365 aaKnown RBP6.98□□□□□ -1.29
ITCH-201ENST00000262650 DDX54Q8TDD1 881 aaKnown RBP6.98□□□□□ -1.29
ITCH-201ENST00000262650 PNISRQ8TF01 805 aaKnown RBP6.98□□□□□ -1.29
ITCH-201ENST00000262650 RAPGEF4Q8WZA2 1011 aa6.98□□□□□ -1.29
ITCH-201ENST00000262650 GGNBP2Q9H3C7 697 aa6.98□□□□□ -1.29
ITCH-201ENST00000262650 N4BP2Q86UW6 1770 aaPredicted RBP6.98□□□□□ -1.29
ITCH-201ENST00000262650 GRIN3BO60391 1043 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 FBLN1P23142 703 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 HNRNPUQ00839 825 aaKnown RBP eCLIP6.97□□□□□ -1.29
ITCH-201ENST00000262650 NGEFQ8N5V2 710 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 PROCA1Q8NCQ7 364 aaPredicted RBP6.97□□□□□ -1.29
ITCH-201ENST00000262650 YY1AP1Q9H869 796 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 PDZRN3Q9UPQ7 1066 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 FAM200BP0CF97 657 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 POLKQ9UBT6 870 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 SPG7Q9UQ90 795 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 SBF1O95248 1867 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 C10orf71Q711Q0 1435 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 ARFGEF2Q9Y6D5 1785 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 HSPA5P11021 654 aaKnown RBP6.97□□□□□ -1.29
ITCH-201ENST00000262650 SSR1P43307 286 aaKnown RBP6.97□□□□□ -1.29
ITCH-201ENST00000262650 RC3H1Q5TC82 1133 aaKnown RBP6.97□□□□□ -1.29
ITCH-201ENST00000262650 TFCP2L1Q9NZI6 479 aa6.97□□□□□ -1.29
ITCH-201ENST00000262650 ERVV-2B6SEH9 535 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms