RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 UNC5CLQ8IV45 518 aa11.95□□□□□ -0.5
MDH1-201ENST00000233114 CLASRPQ8N2M8 674 aaKnown RBP11.95□□□□□ -0.5
MDH1-201ENST00000233114 PANK2Q9BZ23 570 aa11.95□□□□□ -0.5
MDH1-201ENST00000233114 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
MDH1-201ENST00000233114 NUTM1Q86Y26 1132 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 C9orf78Q9NZ63 289 aaPredicted RBP11.94□□□□□ -0.5
MDH1-201ENST00000233114 PALD1Q9ULE6 856 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 MAP3K2Q9Y2U5 619 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 ZDHHC9Q9Y397 364 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 COL18A1P39060 1754 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 RGPD5Q99666 1765 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 COL15A1P39059 1388 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 ZBTB7CA1YPR0 619 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 HIP1O00291 1037 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 CCDC173Q0VFZ6 552 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 KIAA1211Q6ZU35 1233 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 PROSER2Q86WR7 435 aaPredicted RBP11.94□□□□□ -0.5
MDH1-201ENST00000233114 GAS2L3Q86XJ1 694 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 ANP32BQ92688 251 aaKnown RBP11.94□□□□□ -0.5
MDH1-201ENST00000233114 ECHDC1Q9NTX5 307 aa11.94□□□□□ -0.5
MDH1-201ENST00000233114 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
MDH1-201ENST00000233114 PARP4Q9UKK3 1724 aaKnown RBP11.93□□□□□ -0.5
MDH1-201ENST00000233114 GRM8O00222 908 aa11.93□□□□□ -0.5
MDH1-201ENST00000233114 OS9Q13438 667 aaPredicted RBP11.93□□□□□ -0.5
MDH1-201ENST00000233114 RAPGEF4Q8WZA2 1011 aa11.93□□□□□ -0.5
MDH1-201ENST00000233114 PPP1R9BQ96SB3 815 aa11.93□□□□□ -0.5
MDH1-201ENST00000233114 LSG1Q9H089 658 aaKnown RBP11.93□□□□□ -0.5
MDH1-201ENST00000233114 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
MDH1-201ENST00000233114 CLCN1P35523 988 aa11.92□□□□□ -0.5
MDH1-201ENST00000233114 PKP1Q13835 747 aa11.92□□□□□ -0.5
MDH1-201ENST00000233114 LARP1Q6PKG0 1096 aaKnown RBP11.92□□□□□ -0.5
MDH1-201ENST00000233114 KCNB2Q92953 911 aa11.92□□□□□ -0.5
MDH1-201ENST00000233114 C5P01031 1676 aa11.92□□□□□ -0.5
MDH1-201ENST00000233114 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
MDH1-201ENST00000233114 WDR33Q9C0J8 1336 aaKnown RBP11.92□□□□□ -0.5
MDH1-201ENST00000233114 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
MDH1-201ENST00000233114 NASPP49321 788 aaPredicted RBP11.91□□□□□ -0.5
MDH1-201ENST00000233114 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
MDH1-201ENST00000233114 EVI5LQ96CN4 794 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 RBM33Q96EV2 1170 aaKnown RBP11.91□□□□□ -0.5
MDH1-201ENST00000233114 TTC14Q96N46 770 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 TM6SF1Q9BZW5 370 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 RRAGDQ9NQL2 400 aaPredicted RBP11.91□□□□□ -0.5
MDH1-201ENST00000233114 SNRKQ9NRH2 765 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 DIAPH3Q9NSV4 1193 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
MDH1-201ENST00000233114 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
MDH1-201ENST00000233114 ZSCAN23Q3MJ62 389 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 TRIM44Q96DX7 344 aaPredicted RBP11.91□□□□□ -0.5
MDH1-201ENST00000233114 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 SNX14Q9Y5W7 946 aa11.91□□□□□ -0.5
MDH1-201ENST00000233114 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.5
MDH1-201ENST00000233114 PRPF40AO75400 957 aaKnown RBP11.9□□□□□ -0.5
MDH1-201ENST00000233114 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.5
MDH1-201ENST00000233114 PDIA6Q15084 440 aa11.9□□□□□ -0.5
MDH1-201ENST00000233114 PROSER3Q2NL68 480 aa11.9□□□□□ -0.5
MDH1-201ENST00000233114 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
MDH1-201ENST00000233114 SYAP1Q96A49 352 aaPredicted RBP11.9□□□□□ -0.5
MDH1-201ENST00000233114 CPDO75976 1380 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 TNS3Q68CZ2 1445 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 ANXA1P04083 346 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 PHKG2P15735 406 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 G3BP1Q13283 466 aaKnown RBP eCLIP11.89□□□□□ -0.517e-7■■□□□ 13
MDH1-201ENST00000233114 HS1BP3Q53T59 392 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 ZSCAN31Q96LW9 406 aaPredicted RBP11.89□□□□□ -0.51
MDH1-201ENST00000233114 LIMCH1Q9UPQ0 1083 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.89□□□□□ -0.51
MDH1-201ENST00000233114 RFX7Q2KHR2 1363 aa11.89□□□□□ -0.51
MDH1-201ENST00000233114 ESPNB1AK53 854 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 ATF3P18847 181 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 XPCQ01831 940 aaPredicted RBP11.88□□□□□ -0.51
MDH1-201ENST00000233114 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 SUCLG2Q96I99 432 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 DCAF5Q96JK2 942 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 UPF3BQ9BZI7 483 aaKnown RBP11.88□□□□□ -0.51
MDH1-201ENST00000233114 IL25Q9H293 177 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 SH2B1Q9NRF2 756 aaPredicted RBP11.88□□□□□ -0.51
MDH1-201ENST00000233114 ERBB4Q15303 1308 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 MEGF6O75095 1541 aa11.88□□□□□ -0.51
MDH1-201ENST00000233114 FAM205CA6NFA0 338 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 VPS53Q5VIR6 699 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 TICAM2Q86XR7 235 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 UBE2Q2Q8WVN8 375 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 METTL22Q9BUU2 404 aaPredicted RBP11.87□□□□□ -0.51
MDH1-201ENST00000233114 PHF14O94880 888 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 SNRPA1P09661 255 aaKnown RBP11.87□□□□□ -0.51
MDH1-201ENST00000233114 NCLP19338 710 aaKnown RBP11.87□□□□□ -0.51
MDH1-201ENST00000233114 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
MDH1-201ENST00000233114 LRSAM1Q6UWE0 723 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 AACSQ86V21 672 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 KAZALD1Q96I82 304 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms