RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 TMCO5BA8MYB1 307 aa15.42■□□□□ 0.06
NEK4-201ENST00000233027 FBXO31Q5XUX0 539 aaPredicted RBP15.42■□□□□ 0.06
NEK4-201ENST00000233027 VPS36Q86VN1 386 aa15.42■□□□□ 0.06
NEK4-201ENST00000233027 TICAM2Q86XR7 235 aa15.42■□□□□ 0.06
NEK4-201ENST00000233027 VAT1LQ9HCJ6 419 aa15.42■□□□□ 0.06
NEK4-201ENST00000233027 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
NEK4-201ENST00000233027 FGFR1OPO95684 399 aaKnown RBP15.41■□□□□ 0.06
NEK4-201ENST00000233027 DDX46Q7L014 1031 aaKnown RBP15.41■□□□□ 0.06
NEK4-201ENST00000233027 DHX29Q7Z478 1369 aaKnown RBP15.41■□□□□ 0.06
NEK4-201ENST00000233027 CCDC150Q8NCX0 1101 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 INCENPQ9NQS7 918 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 PIP4K2BP78356 416 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 NOLC1Q14978 699 aaKnown RBP eCLIP15.41■□□□□ 0.06
NEK4-201ENST00000233027 BRF1Q92994 677 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 ZBTB9Q96C00 473 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 RNF41Q9H4P4 317 aaPredicted RBP15.41■□□□□ 0.06
NEK4-201ENST00000233027 PIK3R4Q99570 1358 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 UBE3BQ7Z3V4 1068 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 JADE2Q9NQC1 790 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 ZNF652Q9Y2D9 606 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 RHPN1Q8TCX5 695 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 ALS2CR12Q96Q35 445 aa15.41■□□□□ 0.06
NEK4-201ENST00000233027 TRMT1LQ7Z2T5 733 aaKnown RBP15.4■□□□□ 0.06
NEK4-201ENST00000233027 PAXBP1Q9Y5B6 917 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 UBE4AQ14139 1066 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 DESP17661 470 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 PRPF4BQ13523 1007 aaKnown RBP15.4■□□□□ 0.06
NEK4-201ENST00000233027 CCDC40Q4G0X9 1142 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 NCOA7Q8NI08 942 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 PRIMPOLQ96LW4 560 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 CCDC186Q7Z3E2 898 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 MAATS1Q7Z4T9 603 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 CCDC91Q7Z6B0 441 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 POTEB2H3BUK9 544 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 IDEP14735 1019 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 UBASH3AP57075 661 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 TNIP1Q15025 636 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 CCDC102BQ68D86 513 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 ESYT1Q9BSJ8 1104 aa15.4■□□□□ 0.06
NEK4-201ENST00000233027 ZPR1O75312 459 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 AFMP43652 599 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 PRIM1P49642 420 aaKnown RBP15.39■□□□□ 0.05
NEK4-201ENST00000233027 DNM1Q05193 864 aaKnown RBP15.39■□□□□ 0.05
NEK4-201ENST00000233027 RAB34Q9BZG1 259 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 DNAJC25Q9H1X3 360 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 KIAA0586Q9BVV6 1533 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 CETN2P41208 172 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 TCERG1LQ5VWI1 586 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 HMG20BQ9P0W2 317 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 KLF18A0A0U1RQI7 1052 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 SYKP43405 635 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 PDE1AP54750 535 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 SPECC1Q5M775 1068 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
NEK4-201ENST00000233027 BMS1Q14692 1282 aaKnown RBP15.39■□□□□ 0.05
NEK4-201ENST00000233027 NSD2O96028 1365 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 MFSD6Q6ZSS7 791 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 AOPEPQ8N6M6 819 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.38■□□□□ 0.05
NEK4-201ENST00000233027 V9GYY5 206 aaPredicted RBP15.38■□□□□ 0.05
NEK4-201ENST00000233027 FOXO3O43524 673 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 SKILP12757 684 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 NOP2P46087 812 aaKnown RBP15.38■□□□□ 0.05
NEK4-201ENST00000233027 CALML4Q96GE6 196 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 TTC12Q9H892 705 aaPredicted RBP15.38■□□□□ 0.05
NEK4-201ENST00000233027 RBM8AQ9Y5S9 174 aaKnown RBP15.38■□□□□ 0.05
NEK4-201ENST00000233027 MYO1BO43795 1136 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 CLCN1P35523 988 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 CHMP4BP1P59074 171 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 FAM107BQ9H098 131 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 ZSCAN16Q9H4T2 348 aaPredicted RBP15.38■□□□□ 0.05
NEK4-201ENST00000233027 CWC25Q9NXE8 425 aaPredicted RBP15.38■□□□□ 0.05
NEK4-201ENST00000233027 CHPF2Q9P2E5 772 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 AMOTL2Q9Y2J4 779 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 IL16Q14005 1332 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 CCDC171Q6TFL3 1326 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 GCOM1H8Y6P7 765 aaPredicted RBP15.38■□□□□ 0.05
NEK4-201ENST00000233027 MYZAPP0CAP1 466 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 LDHAL6AQ6ZMR3 332 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 Q6ZUG5 572 aa15.38■□□□□ 0.05
NEK4-201ENST00000233027 TMOD2Q9NZR1 351 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 PHF8Q9UPP1 1060 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 MRPL50Q8N5N7 158 aaKnown RBP15.37■□□□□ 0.05
NEK4-201ENST00000233027 MMRN2Q9H8L6 949 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 DACT1Q9NYF0 836 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 GOLGA6L9A6NEM1 432 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 MARCKSP29966 332 aaPredicted RBP15.37■□□□□ 0.05
NEK4-201ENST00000233027 MICALCLQ6ZW33 695 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 TCP11L1Q9NUJ3 509 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 DNAI1Q9UI46 699 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 N4BP3O15049 544 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 F13A1P00488 732 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 TTF1Q15361 905 aaPredicted RBP15.37■□□□□ 0.05
NEK4-201ENST00000233027 C8orf58Q8NAV2 365 aa15.37■□□□□ 0.05
NEK4-201ENST00000233027 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 GPATCH11Q8N954 259 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 CUL5Q93034 780 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 TTC21BQ7Z4L5 1316 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 TSPY2A6NKD2 308 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 ANAPC15P60006 121 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms