RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 RAB3GAP1Q15042 981 aa17.18■□□□□ 0.34
PTK7-201ENST00000230418 EAF2Q96CJ1 260 aaPredicted RBP17.18■□□□□ 0.34
PTK7-201ENST00000230418 AK2P54819 239 aa17.18■□□□□ 0.34
PTK7-201ENST00000230418 CHST3Q7LGC8 479 aa17.18■□□□□ 0.34
PTK7-201ENST00000230418 NEURL4Q96JN8 1562 aa17.18■□□□□ 0.34
PTK7-201ENST00000230418 ZNF335Q9H4Z2 1342 aaPredicted RBP17.18■□□□□ 0.34
PTK7-201ENST00000230418 NGLY1Q96IV0 654 aa17.17■□□□□ 0.34
PTK7-201ENST00000230418 GJB2P29033 226 aa17.17■□□□□ 0.34
PTK7-201ENST00000230418 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
PTK7-201ENST00000230418 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
PTK7-201ENST00000230418 USP31Q70CQ4 1352 aa17.16■□□□□ 0.34
PTK7-201ENST00000230418 XRCC6P12956 609 aaKnown RBP eCLIP17.16■□□□□ 0.34
PTK7-201ENST00000230418 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
PTK7-201ENST00000230418 TLR7Q9NYK1 1049 aaKnown RBP17.16■□□□□ 0.34
PTK7-201ENST00000230418 CAMK4Q16566 473 aa17.15■□□□□ 0.34
PTK7-201ENST00000230418 CPLX2Q6PUV4 134 aaKnown RBP17.15■□□□□ 0.34
PTK7-201ENST00000230418 CYP27B1O15528 508 aa17.15■□□□□ 0.34
PTK7-201ENST00000230418 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
PTK7-201ENST00000230418 PCDH11XQ9BZA7 1347 aa17.15■□□□□ 0.34
PTK7-201ENST00000230418 PCDH11YQ9BZA8 1340 aa17.15■□□□□ 0.34
PTK7-201ENST00000230418 CRB1P82279 1406 aa17.14■□□□□ 0.34
PTK7-201ENST00000230418 PDCP20941 246 aa17.14■□□□□ 0.34
PTK7-201ENST00000230418 CCDC82Q8N4S0 544 aa17.14■□□□□ 0.33
PTK7-201ENST00000230418 SGSM2O43147 1006 aa17.14■□□□□ 0.33
PTK7-201ENST00000230418 KIF24Q5T7B8 1368 aa17.13■□□□□ 0.33
PTK7-201ENST00000230418 STX6O43752 255 aa17.13■□□□□ 0.33
PTK7-201ENST00000230418 BRF1Q92994 677 aa17.13■□□□□ 0.33
PTK7-201ENST00000230418 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
PTK7-201ENST00000230418 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
PTK7-201ENST00000230418 ANKRD1Q15327 319 aa17.13■□□□□ 0.33
PTK7-201ENST00000230418 TSPY26PQ9H489 355 aa17.13■□□□□ 0.33
PTK7-201ENST00000230418 TTC41PQ6P2S7 1318 aa17.13■□□□□ 0.33
PTK7-201ENST00000230418 BECN2A8MW95 431 aa17.13■□□□□ 0.33
PTK7-201ENST00000230418 ZSCAN31Q96LW9 406 aaPredicted RBP17.13■□□□□ 0.33
PTK7-201ENST00000230418 ANTXR1Q9H6X2 564 aa17.13■□□□□ 0.33
PTK7-201ENST00000230418 PRIM1P49642 420 aaKnown RBP17.12■□□□□ 0.33
PTK7-201ENST00000230418 KRT85P78386 507 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 PTH1RQ03431 593 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTK7-201ENST00000230418 LRP2BPQ9P2M1 347 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 CNPY2Q9Y2B0 182 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 ANKRD18BA2A2Z9 1011 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 CREB3L3Q68CJ9 461 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 PLBD2Q8NHP8 589 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 TECPR2O15040 1411 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 ATP6V1AP38606 617 aa17.12■□□□□ 0.33
PTK7-201ENST00000230418 G3V3G9 751 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 DCAF8Q5TAQ9 597 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
PTK7-201ENST00000230418 AKAP17AQ02040 695 aaKnown RBP17.11■□□□□ 0.33
PTK7-201ENST00000230418 TRIM29Q14134 588 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 ADGRL3Q9HAR2 1447 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 DDB1Q16531 1140 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 TNNI3KQ59H18 835 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 FAM173BQ6P4H8 233 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 NEK1Q96PY6 1258 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 FPGT-TNNI3KV9GXZ4 949 aa17.11■□□□□ 0.33
PTK7-201ENST00000230418 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 CCDC144CPQ8IYA2 1237 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 C8orf37Q96NL8 207 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 RAD21O60216 631 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 ANAPC15P60006 121 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 CHAF1AQ13111 956 aaPredicted RBP17.1■□□□□ 0.33
PTK7-201ENST00000230418 KRT32Q14532 448 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 SPC24Q8NBT2 197 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 SPATA32Q96LK8 384 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 RAI14Q9P0K7 980 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 GOLGA6L19H0YKK7 550 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
PTK7-201ENST00000230418 CCDC73Q6ZRK6 1079 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 AIDAQ96BJ3 306 aa17.1■□□□□ 0.33
PTK7-201ENST00000230418 CCDC171Q6TFL3 1326 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 PIBF1Q8WXW3 757 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
PTK7-201ENST00000230418 SLC4A8Q2Y0W8 1093 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 EPHA10Q5JZY3 1008 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 SASS6Q6UVJ0 657 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
PTK7-201ENST00000230418 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
PTK7-201ENST00000230418 IGHMBP2P38935 993 aaKnown RBP17.09■□□□□ 0.33
PTK7-201ENST00000230418 ME1P48163 572 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 TDO2P48775 406 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 ATP2B3Q16720 1220 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 KLHL40Q2TBA0 621 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 PAG1Q9NWQ8 432 aa17.09■□□□□ 0.33
PTK7-201ENST00000230418 A0A1B0GUL7 405 aa17.08■□□□□ 0.33
PTK7-201ENST00000230418 ERICH2A1L162 156 aa17.08■□□□□ 0.33
PTK7-201ENST00000230418 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.33
PTK7-201ENST00000230418 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.33
PTK7-201ENST00000230418 DIP2AQ14689 1571 aa17.08■□□□□ 0.33
PTK7-201ENST00000230418 KDRP35968 1356 aa17.08■□□□□ 0.32
PTK7-201ENST00000230418 A0A0D9SFI3 127 aa17.08■□□□□ 0.32
PTK7-201ENST00000230418 CCDC24Q8N4L8 307 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms