RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 MAP3K5Q99683 1374 aa17.55■□□□□ 0.4
TMEM38A-201ENST00000187762 PSEN1P49768 467 aa17.54■□□□□ 0.4
TMEM38A-201ENST00000187762 GTF2A1P52655 376 aaPredicted RBP17.54■□□□□ 0.4
TMEM38A-201ENST00000187762 CACTINQ8WUQ7 758 aaKnown RBP17.54■□□□□ 0.4
TMEM38A-201ENST00000187762 TMX1Q9H3N1 280 aa17.54■□□□□ 0.4
TMEM38A-201ENST00000187762 CCDC171Q6TFL3 1326 aa17.54■□□□□ 0.4
TMEM38A-201ENST00000187762 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
TMEM38A-201ENST00000187762 RNF20Q5VTR2 975 aa17.54■□□□□ 0.4
TMEM38A-201ENST00000187762 LUZP1Q86V48 1076 aa17.54■□□□□ 0.4
TMEM38A-201ENST00000187762 TXLNBQ8N3L3 684 aa17.54■□□□□ 0.4
TMEM38A-201ENST00000187762 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
TMEM38A-201ENST00000187762 H2AFXP16104 143 aaPredicted RBP17.53■□□□□ 0.4
TMEM38A-201ENST00000187762 ZNF75DP51815 510 aa17.53■□□□□ 0.4
TMEM38A-201ENST00000187762 FER1L4A9Z1Z3 1794 aa17.53■□□□□ 0.4
TMEM38A-201ENST00000187762 SLU7O95391 586 aaKnown RBP17.53■□□□□ 0.4
TMEM38A-201ENST00000187762 GNAI3P08754 354 aa17.53■□□□□ 0.4
TMEM38A-201ENST00000187762 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.53■□□□□ 0.4
TMEM38A-201ENST00000187762 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
TMEM38A-201ENST00000187762 PHAXQ9H814 394 aaKnown RBP17.53■□□□□ 0.4
TMEM38A-201ENST00000187762 LOC102724159A0A0B4J2E5 919 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 MCCP23508 829 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 PLA2G4AP47712 749 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 ATP8B2P98198 1209 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 PWP2Q15269 919 aaKnown RBP17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 TEX35Q5T0J7 233 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 CTR9Q6PD62 1173 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 PLA2G4DQ86XP0 818 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 RILPL2Q969X0 211 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 CACNA1FO60840 1977 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 USP27XA6NNY8 438 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 MYO1CO00159 1063 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 PTPN14Q15678 1187 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 KRBA2Q6ZNG9 492 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 NYAP1Q6ZVC0 841 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 C10orf67Q8IYJ2 551 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 MRVI1Q9Y6F6 885 aa17.52■□□□□ 0.4
TMEM38A-201ENST00000187762 TRIM66O15016 1216 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 CASQ1P31415 396 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 ANAPC15P60006 121 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 THEMISQ8N1K5 641 aaPredicted RBP17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 TRIM5Q9C035 493 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 HDAC5Q9UQL6 1122 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 LTN1O94822 1766 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 NPHP1O15259 732 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 PNMA6AP0CW24 399 aaPredicted RBP17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 BRD2P25440 801 aaKnown RBP17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 USP44Q9H0E7 712 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 ICE2Q659A1 982 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 ESYT1Q9BSJ8 1104 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 UPF3BQ9BZI7 483 aaKnown RBP17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
TMEM38A-201ENST00000187762 N4BP2Q86UW6 1770 aaPredicted RBP17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 GYS2P54840 703 aa17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 CCDC144BQ3MJ40 725 aa17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 CCDC144CPQ8IYA2 1237 aa17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 ANKARQ7Z5J8 1434 aa17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 F13A1P00488 732 aa17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 CLCN6P51797 869 aa17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 TYRO3Q06418 890 aa17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 LCMT1Q9UIC8 334 aa17.5■□□□□ 0.39
TMEM38A-201ENST00000187762 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
TMEM38A-201ENST00000187762 CBX8Q9HC52 389 aa17.49■□□□□ 0.39
TMEM38A-201ENST00000187762 CLIP2Q9UDT6 1046 aa17.49■□□□□ 0.39
TMEM38A-201ENST00000187762 STX6O43752 255 aa17.49■□□□□ 0.39
TMEM38A-201ENST00000187762 TPM4P67936 248 aa17.49■□□□□ 0.39
TMEM38A-201ENST00000187762 POLR3GO15318 223 aaPredicted RBP17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 UBTFL1P0CB47 393 aaPredicted RBP17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 ANO2Q9NQ90 1003 aa17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 ATP6V1DQ9Y5K8 247 aa17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 RAD50Q92878 1312 aa17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 CHMLP26374 656 aa17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 MAP3K11Q16584 847 aa17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 ERCC6LQ2NKX8 1250 aa17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 CCDC191Q8NCU4 936 aa17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
TMEM38A-201ENST00000187762 SYT1P21579 422 aa17.47■□□□□ 0.39
TMEM38A-201ENST00000187762 NUTM1Q86Y26 1132 aa17.47■□□□□ 0.39
TMEM38A-201ENST00000187762 IL25Q9H293 177 aa17.47■□□□□ 0.39
TMEM38A-201ENST00000187762 LGR6Q9HBX8 967 aa17.47■□□□□ 0.39
TMEM38A-201ENST00000187762 MAP4K4O95819 1239 aaPredicted RBP17.47■□□□□ 0.39
TMEM38A-201ENST00000187762 SMARCE1Q969G3 411 aa17.47■□□□□ 0.39
TMEM38A-201ENST00000187762 USP54Q70EL1 1684 aa17.47■□□□□ 0.39
TMEM38A-201ENST00000187762 RGPD2P0DJD1 1756 aa17.47■□□□□ 0.39
TMEM38A-201ENST00000187762 ST5P78524 1137 aa17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 ZSCAN26Q16670 478 aa17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 ANO6Q4KMQ2 910 aa17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 LRRC8AQ8IWT6 810 aa17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 KCNQ3O43525 872 aa17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 DNM1Q05193 864 aaKnown RBP17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 NBPF6Q5VWK0 638 aa17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 TDRD7Q8NHU6 1098 aaKnown RBP17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 IL17RAQ96F46 866 aa17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 NBPF4Q96M43 638 aa17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 MYCBPQ99417 103 aaPredicted RBP17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 NCAPGQ9BPX3 1015 aa17.46■□□□□ 0.39
TMEM38A-201ENST00000187762 CLGNO14967 610 aa17.45■□□□□ 0.38
TMEM38A-201ENST00000187762 ANXA1P04083 346 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms