RNA–Protein interactions for RNA: ENSMUST00000050905.15

Tpm1-203, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-203ENSMUST00000050905 Scn9aQ62205 1984 aa12.18□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Nup188Q6ZQH8 1759 aa12.18□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Disp3A3KFU9 1347 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Ttc41Q692V3 1318 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Btaf1E9QAE3 1848 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Gm7347D3YYI9 267 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Speer4aF8VPX6 267 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 AK157302I3ITR1 129 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Hsp90ab1P11499 724 aaKnown RBP12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Cyp19a1P28649 503 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Lrch1P62046 709 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Map3k9Q3U1V8 1077 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Mrs2Q5NCE8 434 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Morc2aQ69ZX6 1030 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Bicc1Q99MQ1 977 aaKnown RBP12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Isca1Q9D924 129 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Ank1Q02357 1862 aa12.17□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Tspoap1Q7TNF8 1846 aa12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 MypnQ5DTJ9 1315 aa12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Zc3h15Q3TIV5 426 aaKnown RBP12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Fam83gQ5SWY7 812 aa12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Irf9Q61179 399 aa12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Glg1Q61543 1175 aaKnown RBP12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Nlgn2Q69ZK9 836 aa12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Skor1Q8BX46 964 aa12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 WaslQ91YD9 501 aa12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Foxo4Q9WVH3 505 aa12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Lgr5Q9Z1P4 907 aa12.16□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Arap2Q8BZ05 1703 aa12.15□□□□□ -0.46
Tpm1-203ENSMUST00000050905 NfixP70257 488 aa12.15□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Gas2l2Q5SSG4 860 aa12.15□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Popdc2Q9ES82 367 aa12.15□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Cyp2ab1S4R196 498 aa12.15□□□□□ -0.46
Tpm1-203ENSMUST00000050905 Cnksr1A2A9K7 700 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Rbm25B2RY56 838 aaKnown RBP12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Cops6O88545 324 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Myd88P22366 296 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 EappQ5BU09 281 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 CoilQ5SU73 570 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Scaf8Q6DID3 1268 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Myoz2Q9JJW5 264 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Sall2Q9QX96 1004 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Tbc1d8Q9Z1A9 1134 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Pappa2E9PZ87 1789 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Ankrd50F7BE84 1390 aa12.14□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Thsd7bQ6P4U0 1607 aa12.13□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Supt5hO55201 1082 aaKnown RBP12.13□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Ppp1r1bQ60829 194 aa12.13□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Cyp7a1Q64505 503 aa12.13□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Clca2Q8BG22 942 aa12.13□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Ly6iQ9WU67 134 aa12.13□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Ttc21aQ8C0S4 1314 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Glt1d1A4FUP9 346 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 NmiO35309 314 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Atp6v1aP50516 617 aaKnown RBP12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Map3k2Q61083 619 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 BcanQ61361 883 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Ppm1mQ8BU27 406 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 AbraQ8BUZ1 375 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Speer4f1Q9D5Q6 258 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Plagl1Q9JLQ4 704 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Ltn1Q6A009 1767 aa12.12□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Oas2E9Q9A9 742 aa12.11□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Slc4a2P13808 1237 aaKnown RBP12.11□□□□□ -0.47
Tpm1-203ENSMUST00000050905 VegfbP49766 207 aa12.11□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Fkbp5Q64378 456 aa12.11□□□□□ -0.47
Tpm1-203ENSMUST00000050905 HlfQ8BW74 295 aa12.11□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Sf3b3Q921M3 1217 aaKnown RBP12.11□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Ubxn2aQ99KJ0 258 aa12.11□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Adarb2Q9JI20 745 aa12.11□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Myh1Q5SX40 1942 aa12.11□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Rangap1P46061 589 aaKnown RBP12.1□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Map9Q3TRR0 646 aa12.1□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Tbc1d32Q3URV1 1296 aa12.1□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Sde2Q8K1J5 448 aaKnown RBP12.1□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Plekhg6Q8R0J1 787 aa12.1□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Gdf11Q9Z1W4 405 aa12.1□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Nrxn2E9Q7X7 1710 aa12.1□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Exoc6bA6H5Z3 810 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Eddm13E9Q7F5 164 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Eif6O55135 245 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 VeztQ3ZK22 780 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Tom1l2Q5SRX1 507 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Rad21Q61550 635 aaKnown RBP12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Glis3Q6XP49 780 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Micall1Q8BGT6 870 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Ttc19Q8CC21 365 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Cwc25Q9DBF7 416 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Klf15Q9EPW2 415 aa12.09□□□□□ -0.47
Tpm1-203ENSMUST00000050905 Kif2cQ922S8 721 aa12.08□□□□□ -0.48
Tpm1-203ENSMUST00000050905 Trim26Q99PN3 545 aa12.08□□□□□ -0.48
Tpm1-203ENSMUST00000050905 UvssaQ9D479 717 aa12.08□□□□□ -0.48
Tpm1-203ENSMUST00000050905 Echdc1Q9D9V3 322 aa12.08□□□□□ -0.48
Tpm1-203ENSMUST00000050905 NynrinQ5DTZ0 1840 aa12.08□□□□□ -0.48
Tpm1-203ENSMUST00000050905 Map3k15A2AQW0 1331 aa12.08□□□□□ -0.48
Tpm1-203ENSMUST00000050905 Gm6268A2A3U9 297 aa12.07□□□□□ -0.48
Tpm1-203ENSMUST00000050905 Vamp4O70480 141 aa12.07□□□□□ -0.48
Tpm1-203ENSMUST00000050905 Psmd1Q3TXS7 953 aa12.07□□□□□ -0.48
Tpm1-203ENSMUST00000050905 Ddx58Q6Q899 926 aa12.07□□□□□ -0.48
Tpm1-203ENSMUST00000050905 Znf609Q8BZ47 1413 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms