RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Ctr9Q62018 1173 aaKnown RBP21.28■■□□□ 1
Ebf3-201ENSMUST00000033378 ApobrQ8VBT6 942 aa21.28■■□□□ 1
Ebf3-201ENSMUST00000033378 Lrrc9Q8CDN9 1456 aa21.28■■□□□ 1
Ebf3-201ENSMUST00000033378 Slc5a1Q8C3K6 665 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Ano2Q8CFW1 1002 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Erlin1Q91X78 346 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Kdm3bQ6ZPY7 1562 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Smarcc1P97496 1104 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Ankrd40Q5SUE8 363 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Ccdc172Q810N9 267 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Sil1Q9EPK6 465 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Mlh1Q9JK91 760 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Zmym3Q9JLM4 1370 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Ier5O89113 308 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Mdm2P23804 489 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 VeztQ3ZK22 780 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Zfp397Q7TNK4 527 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Krt25Q8VCW2 446 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Chrna2Q91X60 512 aa21.27■■□□□ 1
Ebf3-201ENSMUST00000033378 Arhgef40Q3UPH7 1517 aa21.26■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Gapvd1Q6PAR5 1458 aa21.26■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Kif2aP28740 705 aa21.26■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Krt23Q99PS0 422 aa21.26■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Knop1Q9Z2Q2 478 aaKnown RBP21.26■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Grm8P47743 908 aa21.26■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Frat1P70339 274 aa21.26■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Cnga2Q62398 664 aa21.26■□□□□ 0.99
Ebf3-201ENSMUST00000033378 NgdnQ9DB96 315 aaKnown RBP21.25■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Sptlc2P97363 560 aaKnown RBP21.25■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Ankle2Q6P1H6 964 aa21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Tsr2Q8C8T8 191 aa21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Lmtk2Q3TYD6 1471 aa21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Mmp8O70138 465 aa21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 SfswapQ3USH5 945 aaKnown RBP21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Gys2Q8VCB3 704 aa21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 DonsonQ9QXP4 560 aa21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 U2af2P26369 475 aaKnown RBP21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Trap1aP19473 224 aa21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Ptgs1P22437 602 aa21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Rnf41Q8BH75 317 aa21.24■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Wdr93Q402B2 695 aa21.23■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Cnpy2Q9QXT0 182 aa21.23■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Oas2E9Q9A9 742 aa21.23■□□□□ 0.99
Ebf3-201ENSMUST00000033378 NmiO35309 314 aa21.23■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Amotl2Q8K371 772 aa21.23■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Tubb4aQ9D6F9 444 aa21.23■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Tex14Q7M6U3 1450 aa21.23■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Api5O35841 504 aaKnown RBP21.23■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Vgll3P85442 326 aa21.23■□□□□ 0.99
Ebf3-201ENSMUST00000033378 DymQ8CHY3 669 aa21.22■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Atg4a-psA0A0G2JFS9 396 aa21.22■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Zscan25B2RX31 543 aa21.22■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Mctp2Q5RJH2 878 aa21.22■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Ppfibp1Q8C8U0 969 aaKnown RBP21.22■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Atg4aQ8C9S8 396 aa21.22■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Prex2Q3LAC4 1598 aa21.22■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Ppip5k1A2ARP1 1436 aa21.22■□□□□ 0.99
Ebf3-201ENSMUST00000033378 PtprgQ05909 1442 aa21.22■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Atp8b3Q6UQ17 1335 aa21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Lrrc45Q8CIM1 670 aa21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 TxlnaQ6PAM1 554 aaKnown RBP21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Pla2r1Q62028 1487 aa21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Pde4bB1AWC9 736 aa21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Ercc3P49135 783 aa21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Ccdc82Q6PG04 518 aa21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Cc2d1bQ8BRN9 848 aa21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Cwc25Q9DBF7 416 aa21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Hip1rQ9JKY5 1068 aa21.21■□□□□ 0.99
Ebf3-201ENSMUST00000033378 Rbm19Q8R3C6 952 aaKnown RBP21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 IncenpQ9WU62 880 aa21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Fbf1A2A870 1173 aa21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Lekr1B2RVN1 116 aa21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Jarid2Q62315 1234 aa21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Abcc6Q9R1S7 1498 aa21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Gm16486A0A1D5RMD1 1434 aa21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Zbtb45Q52KG4 520 aa21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Zswim4Q8C7B8 1101 aa21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 GckrQ91X44 587 aa21.2■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Erich3F6QRE9 1637 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 GnpatP98192 678 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Cers3Q1A3B0 383 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Ubash3aQ3V3E1 624 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Ift122Q6NWV3 1182 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Slc7a3P70423 618 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Ift88Q61371 824 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 GphnQ8BUV3 769 aaKnown RBP21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Als2cr12Q8BVM7 383 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Tmem266Q8BZB3 538 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Nek11Q8C0Q4 628 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Dmrtc1Q9D9R7 182 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Frmpd2A0A140LI67 1392 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 GptQ8QZR5 496 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Cnot6lQ8VEG6 555 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Smtnl1Q99LM3 459 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Smco2Q9DA21 347 aa21.19■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Tpx2A2APB8 745 aaKnown RBP21.18■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Ccdc121E9Q6D3 323 aa21.18■□□□□ 0.98
Ebf3-201ENSMUST00000033378 WizO88286 1684 aaKnown RBP21.18■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Kmt5bQ3U8K7 883 aa21.18■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Ctdp1Q7TSG2 960 aa21.18■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms