RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 SUSD5O60279 629 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 SNX3O60493 162 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 CDC40O60508 579 aaKnown RBP eCLIP9.88□□□□□ -0.83
ATG4B-219ENST00000479941 HCN1O60741 890 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 STX11O75558 287 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 WISP2O76076 250 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 OXSR1O95747 527 aaPredicted RBP9.88□□□□□ -0.83
ATG4B-219ENST00000479941 ANGPTL1O95841 491 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 IGHG3P01860 377 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 HPNP05981 417 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 CD1EP15812 388 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 HOXB9P17482 250 aaPredicted RBP9.88□□□□□ -0.83
ATG4B-219ENST00000479941 PPIBP23284 216 aaKnown RBP9.88□□□□□ -0.83
ATG4B-219ENST00000479941 GDF1P27539 372 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 DCTP40126 519 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 CRATP43155 626 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 UQCRFS1P47985 274 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 MVDP53602 400 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 ATP12AP54707 1039 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 HPCAP84074 193 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 C17orf67Q0P5P2 114 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 KLF10Q13118 480 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 FADDQ13158 208 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 MRPL49Q13405 166 aaKnown RBP9.88□□□□□ -0.83
ATG4B-219ENST00000479941 UBAP2LQ14157 1087 aaKnown RBP9.88□□□□□ -0.83
ATG4B-219ENST00000479941 EIF2S3LQ2VIR3 472 aaKnown RBP9.88□□□□□ -0.83
ATG4B-219ENST00000479941 GTDC1Q4AE62 458 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 COQ5Q5HYK3 327 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 ZAR1Q86SH2 424 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 MISPQ8IVT2 679 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 ZNF527Q8NB42 609 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 PNPT1Q8TCS8 783 aaKnown RBP9.88□□□□□ -0.83
ATG4B-219ENST00000479941 OIT3Q8WWZ8 545 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 RAB8BQ92930 207 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 NMUR2Q9GZQ4 415 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 POLE3Q9NRF9 147 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 FLRT3Q9NZU0 649 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 SLAMF8Q9P0V8 285 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 PPP4R1LQ9P1A2 415 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 GMEB1Q9Y692 573 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 CAPN7Q9Y6W3 813 aa9.88□□□□□ -0.83
ATG4B-219ENST00000479941 USP9XQ93008 2570 aaPredicted RBP9.88□□□□□ -0.83
ATG4B-219ENST00000479941 IGLV3-32A0A0A0MS00 114 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 TRBV5-3A0A0A0MS03 114 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 A0A1B0GTH9 108 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 A0A1B0GVC2 190 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 H3BNH8 94 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 PYCARD-AS1I3L0S3 204 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 ADAM10O14672 748 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 NDUFB5O43674 189 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 FCMRO60667 390 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 TRAPPC6AO75865 159 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 C1QCP02747 245 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 CELA3AP09093 270 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 ENDOUP21128 410 aaKnown RBP9.87□□□□□ -0.83
ATG4B-219ENST00000479941 KCNC4Q03721 635 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 STX5Q13190 355 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 RGNQ15493 299 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 COX20Q5RI15 118 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
ATG4B-219ENST00000479941 APOOLQ6UXV4 268 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 DLEU7Q6UYE1 221 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 TRILQ7L0X0 811 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 MTERF4Q7Z6M4 381 aaKnown RBP9.87□□□□□ -0.83
ATG4B-219ENST00000479941 DHDDSQ86SQ9 333 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 MARCH3Q86UD3 253 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 SPPL2CQ8IUH8 684 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 OR4K17Q8NGC6 315 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 PRR7Q8TB68 274 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 DUSP19Q8WTR2 217 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 PMM1Q92871 262 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 ROPN1LQ96C74 230 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 AURKBQ96GD4 344 aaPredicted RBP9.87□□□□□ -0.83
ATG4B-219ENST00000479941 TRNT1Q96Q11 434 aaKnown RBP9.87□□□□□ -0.83
ATG4B-219ENST00000479941 ZNF350Q9GZX5 532 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 SAP130Q9H0E3 1048 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 LDAHQ9H6V9 325 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 PTGES2Q9H7Z7 377 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 SLC25A37Q9NYZ2 338 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 VAPAQ9P0L0 249 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 P2RX2Q9UBL9 471 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 CORO2BQ9UQ03 480 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 OSGIN2Q9Y236 505 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 MRPS18CQ9Y3D5 142 aaKnown RBP9.87□□□□□ -0.83
ATG4B-219ENST00000479941 WDR45Q9Y484 360 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 DTNAQ9Y4J8 743 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 ZNF407Q9C0G0 2248 aa9.87□□□□□ -0.83
ATG4B-219ENST00000479941 HIVEP3Q5T1R4 2406 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 DNAJC13O75165 2243 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 TRGV5A0A0B4J1U4 118 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 PRAMEF27A3QJZ7 478 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 OR14I1A6ND48 311 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 TMEM247A6NEH6 219 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 BBIP1A8MTZ0 92 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 EVPLLA8MZ36 301 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 NPIPB9F8W1W9 429 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 AQP7O14520 342 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 KIAA0513O60268 411 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 SLC19A2O60779 497 aa9.86□□□□□ -0.83
ATG4B-219ENST00000479941 PDE9AO76083 593 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms