RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ANKDD1BA6NHY2 528 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 TULP2O00295 520 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 NTN3O00634 580 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 CLDN3O15551 220 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 NOL4O94818 638 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLPIP03973 132 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 IGHV4-31P0DP07 118 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 UGT1A6P19224 532 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 FBLP22087 321 aaKnown RBP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 CA4P22748 312 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 CHMLP26374 656 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 CAMLGP49069 296 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 DVL1P1P54792 670 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 NAPAP54920 295 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SRP54P61011 504 aaKnown RBP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 RPS14P62263 151 aaKnown RBP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 KCNJ10P78508 379 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SMARCB1Q12824 385 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 TAF10Q12962 218 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZBTB17Q13105 803 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SGCGQ13326 291 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SF3B4Q15427 424 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SIRPB2Q5JXA9 342 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 DCAF10Q5QP82 559 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 LCN1P1Q5VSP4 162 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 C11orf87Q6NUJ2 197 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 KCTD8Q6ZWB6 473 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 TUBA1AQ71U36 451 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SYVN1Q86TM6 617 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SATL1Q86VE3 508 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZBTB8OSQ8IWT0 167 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 TMEM185AQ8NFB2 350 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 GRHL3Q8TE85 626 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SORCS1Q8WY21 1168 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 FRAT1Q92837 279 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 ART4Q93070 314 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 LGALS12Q96DT0 336 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC47A1Q96FL8 570 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 LMLNQ96KR4 655 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SAMD8Q96LT4 415 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 TUBA1CQ9BQE3 449 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 ALKBH7Q9BT30 221 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 LAT2Q9GZY6 243 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 NACA2Q9H009 215 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 IL25Q9H293 177 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 LIN28AQ9H9Z2 209 aaKnown RBP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 SDR39U1Q9NRG7 319 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 PIGVQ9NUD9 493 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 ACOXLQ9NUZ1 547 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 P4HTMQ9NXG6 502 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 GRID1Q9ULK0 1009 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 U3KQV3 271 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 ATP8B3O60423 1300 aa4.19□□□□□ -1.74
HMGB1P23-201ENST00000518743 IGLV3-22A0A075B6J6 115 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 ERICH2A1L162 156 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 MACROD2A1Z1Q3 448 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 WDR91A4D1P6 747 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 CD8B2A6NJW9 211 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 CCL21O00585 134 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 EPHB6O15197 1021 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 AQP9O43315 295 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 NME2P1O60361 137 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 SOCS5O75159 536 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 PEX11AO75192 247 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR6B1O95007 311 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 TGFAP01135 160 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 KRT5P13647 590 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 ANPEPP15144 967 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 EPHA2P29317 976 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 SPAM1P38567 509 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 ALDH3B1P43353 468 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC6A12P48065 614 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 CNN1P51911 297 aaKnown RBP4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 CDH11P55287 796 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 KCNK10P57789 538 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC26A5P58743 744 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 BRWD1-AS2P59051 145 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 PSMC5P62195 406 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 SLC7A9P82251 487 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 KLHL30Q0D2K2 578 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 ALX1Q15699 326 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 KRTAP24-1Q3LI83 254 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 PHLDA2Q53GA4 152 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 UGT3A1Q6NUS8 523 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 IRGCQ6NXR0 463 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 AFTPHQ6ULP2 937 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 ARSKQ6UWY0 536 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 UNC5DQ6UXZ4 953 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 IL17RELQ6ZVW7 336 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 PTAR1Q7Z6K3 402 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 RTN4RL2Q86UN3 420 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 HAS2Q92819 552 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 TRIM44Q96DX7 344 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 RMND5BQ96G75 393 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 VPS39Q96JC1 886 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 WWTR1Q9GZV5 400 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 CARD9Q9H257 536 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 NEUROG2Q9H2A3 272 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 LRRN3Q9H3W5 708 aa4.18□□□□□ -1.74
HMGB1P23-201ENST00000518743 DHX33Q9H6R0 707 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms