RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 A0A0X1KG70 313 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 TMEM202A6NGA9 273 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 C12orf71A8MTZ7 269 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 C1orf189Q5VU69 101 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 MAMDC2Q7Z304 686 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-201ENST00000264555 OR2L3Q8NG85 312 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 WDR20Q8TBZ3 569 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 CREB3L1Q96BA8 519 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 TM4SF18Q96CE8 201 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 TMEM38AQ9H6F2 299 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 FAIMQ9NVQ4 179 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 H3BQ06 376 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-201ENST00000264555 EEF1E1O43324 174 aaKnown RBP15.74■□□□□ 0.11
PHRF1-201ENST00000264555 POLR2IP36954 125 aaKnown RBP15.74■□□□□ 0.11
PHRF1-201ENST00000264555 RGS6P49758 472 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 ADAMTS16Q8TE57 1224 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 THAP3Q8WTV1 239 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-201ENST00000264555 DUS3LQ96G46 650 aaKnown RBP15.74■□□□□ 0.11
PHRF1-201ENST00000264555 STARD5Q9NSY2 213 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 TEX10Q9NXF1 929 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-201ENST00000264555 RARRES3Q9UL19 164 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 TBC1D24Q9ULP9 559 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 ZNF443Q9Y2A4 671 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-201ENST00000264555 CSNK1G3Q9Y6M4 447 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 COL4A5P29400 1685 aa15.74■□□□□ 0.11
PHRF1-201ENST00000264555 PHYHO14832 338 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 PNMTP11086 282 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 CTGFP29279 349 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 HOXC12P31275 282 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 SMN1Q16637 294 aaKnown RBP15.73■□□□□ 0.11
PHRF1-201ENST00000264555 PIP5KL1Q5T9C9 394 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 FAM71E1Q6IPT2 247 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 TCEAL6Q6IPX3 200 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 FBXO42Q6P3S6 717 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 LEG1Q6P5S2 330 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 XKRXQ6PP77 449 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 GPAT4Q86UL3 456 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 VRK2Q86Y07 508 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 NEURL3Q96EH8 262 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 CXorf36Q9H7Y0 433 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 PLAC1Q9HBJ0 212 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 LRRTM2O43300 516 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 GKN3PP0CG01 181 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 SCGB3A2Q96PL1 93 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 SLC9B1P1A6NJY1 282 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 SLC16A6O15403 523 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 CSN2P05814 226 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 CHMP24386 653 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 SOX3P41225 446 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 TBRG1Q3YBR2 411 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 ENTPD8Q5MY95 495 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 FAM217AQ8IXS0 508 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 ASB16Q96NS5 453 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 C1QTNF2Q9BXJ5 285 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 TAAR2Q9P1P5 351 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 ZNF639Q9UID6 485 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 BLACEA4D250 179 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 CDC40O60508 579 aaKnown RBP eCLIP15.73■□□□□ 0.11
PHRF1-201ENST00000264555 SCGB2B2Q4G0G5 96 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 RASSF6Q6ZTQ3 369 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 OR52R1Q8NGF1 315 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 ALG8Q9BVK2 526 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 CPNE5Q9HCH3 593 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 SPATA6Q9NWH7 488 aaPredicted RBP15.73■□□□□ 0.11
PHRF1-201ENST00000264555 NUMBLQ9Y6R0 609 aa15.73■□□□□ 0.11
PHRF1-201ENST00000264555 CLDN24A6NM45 220 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 C17orf105B2RV13 164 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 PVRP15151 417 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 HOXC5Q00444 222 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 GDPD1Q8N9F7 314 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 TMEM163Q8TC26 289 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 PPT2Q9UMR5 302 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 A0A1W2PPL8 197 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 A0A1W2PQL4 384 aaPredicted RBP15.72■□□□□ 0.11
PHRF1-201ENST00000264555 HCKP08631 526 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 H2BFMP0C1H6 154 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 CTXN1P60606 82 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 DPTQ07507 201 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 CYHR1Q6ZMK1 362 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 OR8H3Q8N146 312 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 A4GALTQ9NPC4 353 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 OR14I1A6ND48 311 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 GASTP01350 101 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 EIF2DP41214 584 aaKnown RBP15.72■□□□□ 0.11
PHRF1-201ENST00000264555 GIPRP48546 466 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 BPIFA2Q96DR5 249 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 ALKBH4Q9NXW9 302 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 DHDHQ9UQ10 334 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 CA5BQ9Y2D0 317 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 SMCHD1A6NHR9 2005 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 TRBV4-1A0A0J9YWV2 114 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 H3BNC9 293 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 FMO6PO60774 539 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 TRAPPC6AO75865 159 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 RAB3BP20337 219 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 COX20Q5RI15 118 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 METRNLQ641Q3 311 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 ALKBH2Q6NS38 261 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 WDR53Q7Z5U6 358 aaPredicted RBP15.72■□□□□ 0.11
PHRF1-201ENST00000264555 IGFN1Q86VF2 1251 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms