RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 SYNGR4O95473 234 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 IGHV1-2P23083 117 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 COL8A2P25067 703 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 EEF1GP26641 437 aaKnown RBP5.65□□□□□ -1.5
HDAC3-206ENST00000471968 ABCD3P28288 659 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 IMPA1P29218 277 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 NTF4P34130 210 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 ADRA1AP35348 466 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 STT3AP46977 705 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 LCN2P80188 198 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 EGR3Q06889 387 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 SNTA1Q13424 505 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 HERPUD1Q15011 391 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 EFTUD2Q15029 972 aaKnown RBP eCLIP5.65□□□□□ -1.52e-17■■■■■ 38.5
HDAC3-206ENST00000471968 ADIPOQQ15848 244 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 ELFN2Q5R3F8 820 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 SH2D4BQ5SQS7 431 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 HLA-DQA1Q5Y7H0 255 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 TMEM81Q6P7N7 255 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 Q6ZT83 130 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 GALNT10Q86SR1 603 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 MAP7D3Q8IWC1 876 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 TUSC5Q8IXB3 177 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF567Q8N184 647 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 DEFB108BQ8NET1 73 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 OR10D3Q8NH80 312 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 FBXO30Q8TB52 745 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 JADE3Q92613 823 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 HGDQ93099 445 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 FAM136AQ96C01 138 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 RAB39BQ96DA2 213 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 RNF157Q96PX1 679 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 ALS2CR12Q96Q35 445 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 PANX3Q96QZ0 392 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 NPLQ9BXD5 320 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-206ENST00000471968 AICDAQ9GZX7 198 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 DDX47Q9H0S4 455 aaKnown RBP5.65□□□□□ -1.5
HDAC3-206ENST00000471968 NDST4Q9H3R1 872 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 DYNLRB1Q9NP97 96 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 CA10Q9NS85 328 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 ZNF275Q9NSD4 429 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-206ENST00000471968 SEC14L4Q9UDX3 406 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 PRSS50Q9UI38 385 aa5.65□□□□□ -1.5
HDAC3-206ENST00000471968 DYNC1H1Q14204 4646 aaKnown RBP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 TRBC2A0A5B9 178 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 OR2M5A3KFT3 312 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 CCDC151A5D8V7 595 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 OR6C76A6NM76 312 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 B4DXG7 233 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 CXCL13O43927 109 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 DEAF1O75398 565 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 PPM1BO75688 479 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 AIFM1O95831 613 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 IGHV4-38-2P0DP08 117 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 HK1P19367 917 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 CD33P20138 364 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 ACHEP22303 614 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 HOXD3P31249 432 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 RPL4P36578 427 aaKnown RBP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 SLC1A3P43003 542 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 SCTRP47872 440 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 GEMP55040 296 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 LIM2P55344 173 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 DSCR4P56555 118 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 POLR2FP61218 127 aaKnown RBP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 HMGCS1Q01581 520 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 ZNF267Q14586 743 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 KCNJ11Q14654 390 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 PDK2Q15119 407 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 EFNB3Q15768 340 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 DEFB112Q30KQ8 113 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 NSUN5P1Q3KNT7 163 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 GTF2IRD2BQ6EKJ0 949 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 GTF2IRD2Q86UP8 949 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 GGNQ86UU5 652 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 SATL1Q86VE3 508 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 TBC1D19Q8N5T2 526 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 OR4K17Q8NGC6 315 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 ABHD3Q8WU67 409 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 STYXQ8WUJ0 223 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 ZG16BQ96DA0 208 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 RBM18Q96H35 190 aaKnown RBP5.64□□□□□ -1.51
HDAC3-206ENST00000471968 RCHY1Q96PM5 261 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 GORASP1Q9BQQ3 440 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 PCBD2Q9H0N5 130 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 MMP28Q9H239 520 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 GANQ9H2C0 597 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 SPNS1Q9H2V7 528 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 EHD3Q9NZN3 535 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 CFAP45Q9UL16 551 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 AUP1Q9Y679 476 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 HSPG2P98160 4391 aa5.64□□□□□ -1.51
HDAC3-206ENST00000471968 HEATR1Q9H583 2144 aaKnown RBP5.63□□□□□ -1.51
HDAC3-206ENST00000471968 C17orf51A8MQB3 221 aa5.63□□□□□ -1.51
HDAC3-206ENST00000471968 hCG_2039718K7EN88 272 aa5.63□□□□□ -1.51
HDAC3-206ENST00000471968 PRMT5O14744 637 aaPredicted RBP5.63□□□□□ -1.51
HDAC3-206ENST00000471968 APOL1O14791 398 aa5.63□□□□□ -1.51
HDAC3-206ENST00000471968 ERI3O43414 337 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms