RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PSG6Q00889 435 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 SF3A3Q12874 501 aaKnown RBP eCLIP16.72■□□□□ 0.279e-12■■■■■ 32
VEGFA-222ENST00000520948 SQLEQ14534 574 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 CT45A2Q5DJT8 189 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 SLC34A3Q8N130 599 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 BCORP1Q8N888 145 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 VPS37AQ8NEZ2 397 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 NUP43Q8NFH3 380 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 HSPBAP1Q96EW2 488 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 MAGED4Q96JG8 741 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 LCORQ96JN0 433 aaPredicted RBP16.72■□□□□ 0.27
VEGFA-222ENST00000520948 SIGLEC12Q96PQ1 595 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 BTBD9Q96Q07 612 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 OR52E6Q96RD3 313 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 GAL3ST4Q96RP7 486 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 UTP23Q9BRU9 249 aaKnown RBP16.72■□□□□ 0.27
VEGFA-222ENST00000520948 C3orf14Q9HBI5 128 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 NEUROD4Q9HD90 331 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 SERHLQ9NQF3 203 aa16.72■□□□□ 0.27
VEGFA-222ENST00000520948 DDX18Q9NVP1 670 aaKnown RBP16.72■□□□□ 0.27
VEGFA-222ENST00000520948 NUP214P35658 2090 aaPredicted RBP16.72■□□□□ 0.27
VEGFA-222ENST00000520948 PRSS44E7EML9 344 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 HNRNPRO43390 633 aaKnown RBP16.71■□□□□ 0.27
VEGFA-222ENST00000520948 NEURL1O76050 574 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 OR6B1O95007 311 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 F10P00742 488 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 SOX3P41225 446 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 CCT3P49368 545 aaKnown RBP16.71■□□□□ 0.27
VEGFA-222ENST00000520948 CYB561P49447 251 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 LRRC74AQ0VAA2 488 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 RCAN2Q14206 197 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 ZNF791Q3KP31 576 aaPredicted RBP16.71■□□□□ 0.27
VEGFA-222ENST00000520948 HLA-DQA1Q5Y7H0 255 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 NPSR1Q6W5P4 371 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 MSANTD1Q6ZTZ1 278 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 ANKRD46Q86W74 232 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 GPALPP1Q8IXQ4 340 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 SFXN5Q8TD22 340 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 ELAC2Q9BQ52 826 aaKnown RBP16.71■□□□□ 0.27
VEGFA-222ENST00000520948 LMF2Q9BU23 707 aaKnown RBP16.71■□□□□ 0.27
VEGFA-222ENST00000520948 ANKRD10Q9NXR5 420 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 PCDHGB6Q9Y5F9 930 aa16.71■□□□□ 0.27
VEGFA-222ENST00000520948 CSMD1Q96PZ7 3565 aa16.71■□□□□ 0.26
VEGFA-222ENST00000520948 ABCA12Q86UK0 2595 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 FRG2CA6NGY1 282 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 CFLARO15519 480 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 SNX3O60493 162 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 ERN1O75460 977 aaKnown RBP16.7■□□□□ 0.26
VEGFA-222ENST00000520948 STSP08842 583 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 FBXO45P0C2W1 286 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 OR1C1Q15619 314 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 SP5Q6BEB4 398 aaPredicted RBP16.7■□□□□ 0.26
VEGFA-222ENST00000520948 SPINK14Q6IE38 97 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 ZCCHC12Q6PEW1 402 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 OPN5Q6U736 354 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 TMEM156Q8N614 296 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 SLC22A8Q8TCC7 542 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 MOAP1Q96BY2 351 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 TAAR6Q96RI8 345 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 RABEP2Q9H5N1 569 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 SAR1AQ9NR31 198 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 CCDC167Q9P0B6 97 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 LRFN1Q9P244 771 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 ADAM21Q9UKJ8 722 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 PCDHGB4Q9UN71 923 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 NPFFR2Q9Y5X5 522 aa16.7■□□□□ 0.26
VEGFA-222ENST00000520948 A0A1B0GUH1 482 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 ASPDHA6ND91 283 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 TTC36A6NLP5 189 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 ACOX3O15254 700 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 CPSF4O95639 269 aaKnown RBP16.69■□□□□ 0.26
VEGFA-222ENST00000520948 ABCB1P08183 1280 aaPredicted RBP16.69■□□□□ 0.26
VEGFA-222ENST00000520948 NAGAP17050 411 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 UQCRC2P22695 453 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 CORO7P57737 925 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 PRR5P85299 388 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 AGKQ53H12 422 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 MFSD12Q6NUT3 480 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 RPUSD3Q6P087 351 aaKnown RBP16.69■□□□□ 0.26
VEGFA-222ENST00000520948 IL20RBQ6UXL0 311 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 SPATA21Q7Z572 469 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 PIGWQ7Z7B1 504 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 TAGAPQ8N103 731 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 OR4A15Q8NGL6 344 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 ASB15Q8WXK1 588 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 VPS33AQ96AX1 596 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 SCMH1Q96GD3 660 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 C16orf58Q96GQ5 468 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 MS4A4EQ96PG1 132 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 PHF12Q96QT6 1004 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 INPP5KQ9BT40 448 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 SH2D2AQ9NP31 389 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 ZCCHC3Q9NUD5 404 aaKnown RBP16.69■□□□□ 0.26
VEGFA-222ENST00000520948 GPATCH2Q9NW75 528 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 SNX8Q9Y5X2 465 aa16.69■□□□□ 0.26
VEGFA-222ENST00000520948 TRAV17A0A0B4J275 112 aa16.68■□□□□ 0.26
VEGFA-222ENST00000520948 A8MVJ9 347 aa16.68■□□□□ 0.26
VEGFA-222ENST00000520948 SHOX2O60902 331 aaPredicted RBP16.68■□□□□ 0.26
VEGFA-222ENST00000520948 NKX2-2O95096 273 aa16.68■□□□□ 0.26
VEGFA-222ENST00000520948 HMGN2P05204 90 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms