RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 SIMC1Q8NDZ2 872 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 DOK4Q8TEW6 326 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 FAM3CQ92520 227 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PKP4Q99569 1192 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 GTPBP2Q9BX10 602 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 BTBD1Q9H0C5 482 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PHPT1Q9NRX4 125 aaPredicted RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 ACOXLQ9NUZ1 547 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 GDE1Q9NZC3 331 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 VPS29Q9UBQ0 182 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 GRIP1Q9Y3R0 1128 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 DYRK1BQ9Y463 629 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 SVILO95425 2214 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 TRBV4-1A0A0J9YWV2 114 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 TMEM202A6NGA9 273 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 OR52A4PA6NMU1 304 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 TTLL8A6PVC2 850 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 FFAR1O14842 300 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 SGCEO43556 437 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 SEMA7AO75326 666 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ANXA8P13928 327 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ADRB3P13945 408 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 TIMP2P16035 220 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 HOXB6P17509 224 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 POLR2CP19387 275 aaPredicted RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 IDSP22304 550 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 MAPK1P28482 360 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PCGF2P35227 344 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ARL4DP49703 201 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PRKAG1P54619 331 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ERVK-25P63136 954 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 LSM11P83369 360 aaKnown RBP eCLIP8.6□□□□□ -1.03
TOP1-201ENST00000361337 TAGLNQ01995 201 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 HSF2Q03933 536 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 EIF4HQ15056 248 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 DUSP7Q16829 419 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 HNRNPA1L2Q32P51 320 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 GLYR1Q49A26 553 aaPredicted RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 BCL2L15Q5TBC7 163 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 CASP12Q6UXS9 341 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 Q6ZS52 159 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 FAM129CQ86XR2 697 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 RNF130Q86XS8 419 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 KIF18BQ86Y91 864 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 C11orf65Q8NCR3 313 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 VN1R2Q8NFZ6 395 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 GINS4Q9BRT9 223 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 NMNAT1Q9HAN9 279 aaPredicted RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 LMAN1LQ9HAT1 526 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 FAM120CQ9NX05 1096 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 ZDHHC3Q9NYG2 299 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 SNX11Q9Y5W9 270 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 A0A1W2PQL4 384 aaPredicted RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 TOR1AO14656 332 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 MOSPD3O75425 235 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 C6orf47O95873 294 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 IFNA7P01567 189 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 SCG5P05408 212 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 GLAP06280 429 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 DCNP07585 359 aaKnown RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 ANXA4P09525 319 aaPredicted RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 PDHA2P29803 388 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 GPC1P35052 558 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 ACSM2AQ08AH3 577 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 DOC2AQ14183 400 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 LARS2Q15031 903 aaKnown RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 TATDN3Q17R31 274 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 AMZ1Q400G9 498 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 GGTA1PQ4G0N0 100 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 IFI44LQ53G44 452 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 SAXO2Q658L1 398 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 ACSM2BQ68CK6 577 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 PRSS58Q8IYP2 241 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 IQCF1Q8N6M8 205 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 FAM46DQ8NEK8 389 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 WDR20Q8TBZ3 569 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 WFIKKN2Q8TEU8 576 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 ASB11Q8WXH4 323 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 OTUB2Q96DC9 234 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 C3orf14Q9HBI5 128 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 PCDHB16Q9NRJ7 776 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 TM7SF3Q9NS93 570 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 KCTD5Q9NXV2 234 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 MGAT4BQ9UQ53 548 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 CCDC88CQ9P219 2028 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 TO15178 435 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 DPM1O60762 260 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 LILRB3O75022 631 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 EGFP01133 1207 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 JUPP14923 745 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 MYL12AP19105 171 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 AK4P27144 223 aaPredicted RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 NTSR1P30989 418 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 SCARB2Q14108 478 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 SEC23BQ15437 767 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 MPEG1Q2M385 716 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 ESCO2Q56NI9 601 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 RPS26P11Q5JNZ5 115 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms