RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 ZNF558Q96NG5 402 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 MED18Q9BUE0 208 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 TM7SF3Q9NS93 570 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 CLEC4AQ9UMR7 237 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 SLC9A8Q9Y2E8 581 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 LILRB5O75023 590 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 GPR4P46093 362 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 CLDN20P56880 219 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 PCBP4P57723 403 aaKnown RBP16.9■□□□□ 0.3
TRAF4-201ENST00000262395 TAS2R41P59536 307 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 EFNB1P98172 346 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 SREBF2Q12772 1141 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 PIP5KL1Q5T9C9 394 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 C1orf94Q6P1W5 598 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 NR2C2APQ86WQ0 139 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 MAP6Q96JE9 813 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 C17orf62Q9BQA9 187 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 GLIPR2Q9H4G4 154 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 ISG20L2Q9H9L3 353 aaKnown RBP16.9■□□□□ 0.3
TRAF4-201ENST00000262395 STMN3Q9NZ72 180 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 EXTL2Q9UBQ6 330 aa16.9■□□□□ 0.3
TRAF4-201ENST00000262395 CDH23Q9H251 3354 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 TMEM129A0AVI4 362 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 PI15O43692 258 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 OR1F1O43749 312 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 AKAP8O43823 692 aaKnown RBP16.89■□□□□ 0.29
TRAF4-201ENST00000262395 ACADMP11310 421 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 COX10Q12887 443 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 ZNF658BQ4V348 819 aaPredicted RBP16.89■□□□□ 0.29
TRAF4-201ENST00000262395 DPPA4Q7L190 304 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 C17orf64Q86WR6 236 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 SLC39A11Q8N1S5 342 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 TRMT61BQ9BVS5 477 aaKnown RBP16.89■□□□□ 0.29
TRAF4-201ENST00000262395 NEUROD4Q9HD90 331 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 ZFR2Q9UPR6 939 aaKnown RBP16.89■□□□□ 0.29
TRAF4-201ENST00000262395 PLXNA2O75051 1894 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 TCF20Q9UGU0 1960 aaKnown RBP16.89■□□□□ 0.29
TRAF4-201ENST00000262395 WASH3PC4AMC7 463 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 FABP7O15540 132 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 ORC5O43913 435 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 UBL4AP11441 157 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 NCBP2P52298 156 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRAF4-201ENST00000262395 FAM27D1Q5T7N8 215 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 BCL2L15Q5TBC7 163 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 FAAH2Q6GMR7 532 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 PLCZ1Q86YW0 608 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 DUSP18Q8NEJ0 188 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 IRF7Q92985 503 aa16.89■□□□□ 0.29
TRAF4-201ENST00000262395 KIAA1143Q96AT1 154 aaPredicted RBP16.89■□□□□ 0.29
TRAF4-201ENST00000262395 SECISBP2Q96T21 854 aaKnown RBP16.89■□□□□ 0.29
TRAF4-201ENST00000262395 UBXN7O94888 489 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 SYPP08247 313 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 PPP2R1BP30154 601 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 TRIM23P36406 574 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 ZNF155Q12901 538 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-201ENST00000262395 MAB21L1Q13394 359 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 TNK1Q13470 666 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 SDE2Q6IQ49 451 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 VRK2Q86Y07 508 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 MRGPRX3Q96LB0 322 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 SOSTQ9BQB4 213 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 FAM83CQ9BQN1 747 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 MS4A8Q9BY19 250 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 SLC28A3Q9HAS3 691 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 FGF20Q9NP95 211 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-201ENST00000262395 MTCL1Q9Y4B5 1905 aaKnown RBP16.88■□□□□ 0.29
TRAF4-201ENST00000262395 SOCS6O14544 535 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 NOS1APO75052 506 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-201ENST00000262395 SCO1O75880 301 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 C8AP07357 584 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 ACP5P13686 325 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 NNMTP40261 264 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 SRP9P49458 86 aaKnown RBP16.88■□□□□ 0.29
TRAF4-201ENST00000262395 RNF144AP50876 292 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-201ENST00000262395 FUT5Q11128 374 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 FCN2Q15485 313 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 MINDY4Q4G0A6 757 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 RRM2BQ7LG56 351 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 KRT74Q7RTS7 529 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 CCDC28AQ8IWP9 274 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 FAM109AQ8N4B1 249 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 IL17RCQ8NAC3 791 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 UBE2E3Q969T4 207 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 ZDHHC4Q9NPG8 344 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 SEMA4GQ9NTN9 838 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 COQ3Q9NZJ6 369 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 PCDHGB7Q9Y5F8 929 aa16.88■□□□□ 0.29
TRAF4-201ENST00000262395 TRDV1A0A1B0GX56 115 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 LCMT2O60294 686 aaKnown RBP16.87■□□□□ 0.29
TRAF4-201ENST00000262395 ALDH1A1P00352 501 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 TFPIP10646 304 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 GPR176Q14439 515 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 CCDC116Q8IYX3 515 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 BMPERQ8N8U9 685 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 OR4Q3Q8NH05 313 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 FCRL4Q96PJ5 515 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 MARVELD1Q9BSK0 173 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 DPH7Q9BTV6 452 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 DDX31Q9H8H2 851 aaKnown RBP16.87■□□□□ 0.29
TRAF4-201ENST00000262395 MED20Q9H944 212 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms