RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ABI3Q9P2A4 366 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 TAGLN3Q9UI15 199 aa13.03□□□□□ -0.32
VPS25-201ENST00000253794 FAF1Q9UNN5 650 aaPredicted RBP13.03□□□□□ -0.32
VPS25-201ENST00000253794 NUP214P35658 2090 aaPredicted RBP13.03□□□□□ -0.32
VPS25-201ENST00000253794 KMT2BQ9UMN6 2715 aaPredicted RBP13.03□□□□□ -0.32
VPS25-201ENST00000253794 CLIC1O00299 241 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 WWP2O00308 870 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 NME6O75414 186 aaPredicted RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 C1QCP02747 245 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 GUSBP08236 651 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 ALOX5P09917 674 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 FBXO45P0C2W1 286 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 GPX2P18283 190 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 MATN1P21941 496 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 ABCD3P28288 659 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 CHI3L1P36222 383 aaPredicted RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 PIGAP37287 484 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 KHKP50053 298 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 HLCSP50747 726 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 ANXA11P50995 505 aaKnown RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 NR0B1P51843 470 aaKnown RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 NRG3P56975 720 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 DUSP5Q16690 384 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 ZNF791Q3KP31 576 aaPredicted RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 MMEL1Q495T6 779 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 FCRLBQ6BAA4 426 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 HEPHL1Q6MZM0 1159 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 OPN5Q6U736 354 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 C16orf47Q6ZP98 133 aaPredicted RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 SZRD1Q7Z422 152 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 BEST3Q8N1M1 668 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 CLEC4FQ8N1N0 589 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 CHDHQ8NE62 594 aaPredicted RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 OR8J3Q8NGG0 315 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 THAP3Q8WTV1 239 aaPredicted RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 LRRC58Q96CX6 371 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 SLC35A4Q96G79 324 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 AURKBQ96GD4 344 aaPredicted RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 ABHD17AQ96GS6 310 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 OR7D2Q96RA2 312 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 CPPED1Q9BRF8 314 aaPredicted RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 GPATCH1Q9BRR8 931 aaKnown RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 BTBD2Q9BX70 525 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 EFCAB1Q9HAE3 211 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 ARL8BQ9NVJ2 186 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 GID8Q9NWU2 228 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 THUMPD1Q9NXG2 353 aaKnown RBP13.02□□□□□ -0.33
VPS25-201ENST00000253794 CORO2BQ9UQ03 480 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 ZNF451Q9Y4E5 1061 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 PCDHGB3Q9Y5G1 929 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 NPFFR2Q9Y5X5 522 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 BSNQ9UPA5 3926 aa13.02□□□□□ -0.33
VPS25-201ENST00000253794 NBEAQ8NFP9 2946 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 HMGN4O00479 90 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 TSPAN2O60636 221 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 PPM1BO75688 479 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 UNC5CO95185 931 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 AK1P00568 194 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 LCN1P31025 176 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 TMED10P49755 219 aaKnown RBP13.01□□□□□ -0.33
VPS25-201ENST00000253794 MNAT1P51948 309 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 CBX1P83916 185 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 RAPSNQ13702 412 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 TUBA3CQ13748 450 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 RGNQ15493 299 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 NTRK2Q16620 822 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.01□□□□□ -0.33
VPS25-201ENST00000253794 TMEM81Q6P7N7 255 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 TUBA3EQ6PEY2 450 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 ZNF227Q86WZ6 799 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 RNF130Q86XS8 419 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 SLC44A2Q8IWA5 706 aaPredicted RBP13.01□□□□□ -0.33
VPS25-201ENST00000253794 ADAMTS15Q8TE58 950 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 RNF138Q8WVD3 245 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 TM9SF4Q92544 642 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 SLC9A6Q92581 669 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 SPACA9Q96E40 222 aaPredicted RBP13.01□□□□□ -0.33
VPS25-201ENST00000253794 SGCZQ96LD1 299 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 SECISBP2Q96T21 854 aaKnown RBP13.01□□□□□ -0.33
VPS25-201ENST00000253794 OR51I1Q9H343 314 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 IKZF5Q9H5V7 419 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 LIN28AQ9H9Z2 209 aaKnown RBP13.01□□□□□ -0.33
VPS25-201ENST00000253794 ZBTB20Q9HC78 741 aaPredicted RBP13.01□□□□□ -0.33
VPS25-201ENST00000253794 SH2D2AQ9NP31 389 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 CBLCQ9ULV8 474 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 PCDHGB6Q9Y5F9 930 aa13.01□□□□□ -0.33
VPS25-201ENST00000253794 C15orf38-AP3S2A0A0A6YYH1 394 aa13□□□□□ -0.33
VPS25-201ENST00000253794 OR5H15A6NDH6 313 aa13□□□□□ -0.33
VPS25-201ENST00000253794 OR6C70A6NIJ9 312 aa13□□□□□ -0.33
VPS25-201ENST00000253794 EVPLLA8MZ36 301 aa13□□□□□ -0.33
VPS25-201ENST00000253794 ABCB7O75027 752 aa13□□□□□ -0.33
VPS25-201ENST00000253794 TNFRSF21O75509 655 aa13□□□□□ -0.33
VPS25-201ENST00000253794 OR6B1O95007 311 aa13□□□□□ -0.33
VPS25-201ENST00000253794 IL33O95760 270 aa13□□□□□ -0.33
VPS25-201ENST00000253794 WDPCPO95876 746 aa13□□□□□ -0.33
VPS25-201ENST00000253794 PDGFAP04085 211 aa13□□□□□ -0.33
VPS25-201ENST00000253794 T-ENOLP0DO92 83 aa13□□□□□ -0.33
VPS25-201ENST00000253794 SFTPCP11686 197 aa13□□□□□ -0.33
VPS25-201ENST00000253794 GABRA3P34903 492 aa13□□□□□ -0.33
VPS25-201ENST00000253794 SOX3P41225 446 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms