RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 LILRB4Q8NHJ6 448 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 MTERF3Q96E29 417 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 C14orf79Q96F83 325 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 COL21A1Q96P44 957 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 KCNA7Q96RP8 456 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 TMEM109Q9BVC6 243 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 HEY2Q9UBP5 337 aa15.34■□□□□ 0.05
USB1-211ENST00000565662 GPR55Q9Y2T6 319 aaPredicted RBP15.34■□□□□ 0.05
USB1-211ENST00000565662 PRAMEF25A6NGN4 478 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 HSPB2A8KAH6 182 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 MYO1GB0I1T2 1018 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 UBFD1O14562 309 aaKnown RBP15.33■□□□□ 0.04
USB1-211ENST00000565662 SNPHO15079 494 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 ZNF500O60304 480 aaPredicted RBP15.33■□□□□ 0.04
USB1-211ENST00000565662 TBX19O60806 448 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 SEC22BO75396 215 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 CBR3O75828 277 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 ACTL6AO96019 429 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 FGF4P08620 206 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 PCSK2P16519 638 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 CAPN3P20807 821 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 ZFP36L2P47974 494 aaKnown RBP15.33■□□□□ 0.04
USB1-211ENST00000565662 VSNL1P62760 191 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 BTKQ06187 659 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 PCLAFQ15004 111 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 HSPB2Q16082 182 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 VPS26BQ4G0F5 336 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 CYP27C1Q4G0S4 372 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 TIGD3Q6B0B8 471 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 NOXRED1Q6NXP6 359 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 FAM111BQ6SJ93 734 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 LRIG3Q6UXM1 1119 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 R3HCC1LQ7Z5L2 792 aaKnown RBP15.33■□□□□ 0.04
USB1-211ENST00000565662 LACC1Q8IV20 430 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 BANPQ8N9N5 519 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 LRRN4CLQ8ND94 238 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 ADCY4Q8NFM4 1077 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 OR9A2Q8NGT5 310 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 AENQ8WTP8 325 aaKnown RBP15.33■□□□□ 0.04
USB1-211ENST00000565662 UCN3Q969E3 161 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 VSTM2LQ96N03 204 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 TTYH2Q9BSA4 534 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 EBPLQ9BY08 206 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 ENKD1Q9H0I2 346 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 UBQLN3Q9H347 655 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 LRTM1Q9HBL6 345 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 PROK2Q9HC23 129 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 PNPLA3Q9NST1 481 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 DDX18Q9NVP1 670 aaKnown RBP15.33■□□□□ 0.04
USB1-211ENST00000565662 ABCG2Q9UNQ0 655 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 MAPRE3Q9UPY8 281 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 OR10H1Q9Y4A9 318 aa15.33■□□□□ 0.04
USB1-211ENST00000565662 CACNA1DQ01668 2161 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 C15orf38-AP3S2A0A0A6YYH1 394 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 A0A1W2PS29 197 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 SOX30O94993 753 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 CHN1P15882 459 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 CLK3P49761 638 aaKnown RBP15.32■□□□□ 0.04
USB1-211ENST00000565662 NCBP2P52298 156 aaKnown RBP eCLIP15.32■□□□□ 0.04
USB1-211ENST00000565662 PMPCAQ10713 525 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 EXOSC7Q15024 291 aaKnown RBP15.32■□□□□ 0.04
USB1-211ENST00000565662 TRMT12Q53H54 448 aaKnown RBP15.32■□□□□ 0.04
USB1-211ENST00000565662 EMC4Q5J8M3 183 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 ENPP6Q6UWR7 440 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 C3P1Q6ZMU1 363 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 C10orf107Q8IVU9 208 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 CDC26Q8NHZ8 85 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.32■□□□□ 0.047e-6■■■■□ 22
USB1-211ENST00000565662 ZBED6CLQ96FA7 236 aaPredicted RBP15.32■□□□□ 0.04
USB1-211ENST00000565662 PPP3R2Q96LZ3 170 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 ZIM3Q96PE6 472 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 PRDM14Q9GZV8 571 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 Q9N2J8 555 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 SDHAF3Q9NRP4 125 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 FOXD3Q9UJU5 478 aaPredicted RBP15.32■□□□□ 0.04
USB1-211ENST00000565662 EXO1Q9UQ84 846 aaKnown RBP15.32■□□□□ 0.04
USB1-211ENST00000565662 RNF6Q9Y252 685 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 MRPS18CQ9Y3D5 142 aaKnown RBP15.32■□□□□ 0.04
USB1-211ENST00000565662 LIPGQ9Y5X9 500 aa15.32■□□□□ 0.04
USB1-211ENST00000565662 PDPK1O15530 556 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 TRAPPC6AO75865 159 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 FOXA1P55317 472 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 NUP107P57740 925 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 EEF1A1P68104 462 aaKnown RBP15.31■□□□□ 0.04
USB1-211ENST00000565662 MRPS35P82673 323 aaKnown RBP15.31■□□□□ 0.04
USB1-211ENST00000565662 ZNF155Q12901 538 aaPredicted RBP15.31■□□□□ 0.04
USB1-211ENST00000565662 DUSP8Q13202 625 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 RCAN2Q14206 197 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 GANABQ14697 944 aaKnown RBP15.31■□□□□ 0.04
USB1-211ENST00000565662 LTB4RQ15722 352 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 DECR1Q16698 335 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 EEF1A1P5Q5VTE0 462 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 KANK2Q63ZY3 851 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 AAGABQ6PD74 315 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 MMP21Q8N119 569 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 ACBD4Q8NC06 268 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 OR10Q1Q8NGQ4 319 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 CEP70Q8NHQ1 597 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 HGDQ93099 445 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 FCRL1Q96LA6 429 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms