RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 VPS36Q86VN1 386 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 ZCCHC7Q8N3Z6 543 aaKnown RBP4.76□□□□□ -1.65
LINC00458-206ENST00000607494 MLKLQ8NB16 471 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 KLHDC9Q8NEP7 349 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 STEAP2Q8NFT2 490 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 GFRA4Q9GZZ7 299 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 FNDC4Q9H6D8 234 aaPredicted RBP4.76□□□□□ -1.65
LINC00458-206ENST00000607494 ATP13A3Q9H7F0 1226 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 ZNF696Q9H7X3 374 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 C3orf14Q9HBI5 128 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 MAN2C1Q9NTJ4 1040 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 MED17Q9NVC6 651 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 CHRNA9Q9UGM1 479 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 SMC3Q9UQE7 1217 aa4.76□□□□□ -1.65
LINC00458-206ENST00000607494 SF3B1O75533 1304 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 RNF123Q5XPI4 1314 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 C15orf38-AP3S2A0A0A6YYH1 394 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 hCG_38984A0A1B0GV85 526 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ZSCAN5CA6NGD5 496 aaPredicted RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 MSGN1A6NI15 193 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 SHISA7A6NL88 538 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 TCP10L2B9ZVM9 353 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 CXCL11O14625 94 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 BUB1O43683 1085 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 KIAA0513O60268 411 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 CIDEAO60543 219 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 LRCH4O75427 683 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 CALCAP01258 141 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 LYNP07948 512 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 FAM157CP0CG43 387 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ATP6V1C1P21283 382 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 VEGFCP49767 419 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 FHITP49789 147 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 SULT1E1P49888 294 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 BACE1P56817 501 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 CCDC6Q16204 474 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 LRIT3Q3SXY7 679 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 POM121L1PQ3SYA9 428 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 CCDC152Q4G0S7 254 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ZNF790Q6PG37 636 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 CBLN3Q6UW01 205 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 Q6ZVQ6 151 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 TRPT1Q86TN4 253 aaKnown RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ITIH5Q86UX2 942 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 FAM131BQ86XD5 332 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 DND1Q8IYX4 353 aaKnown RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ZNF397Q8NF99 534 aaPredicted RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 TRIM58Q8NG06 486 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 OR4D10Q8NGI6 311 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 OR2T11Q8NH01 316 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 OR2T3Q8NH03 318 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 GATAD1Q8WUU5 269 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ZNRF4Q8WWF5 429 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 TCP11Q8WWU5 503 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 SUSD6Q92537 303 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 TM9SF4Q92544 642 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ZNF501Q96CX3 271 aaPredicted RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 GIMAP5Q96F15 307 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 SENP5Q96HI0 755 aaPredicted RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 COG3Q96JB2 828 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 CNDP1Q96KN2 507 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 C4orf36Q96KX1 117 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ACCSQ96QU6 501 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 RAB40CQ96S21 281 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 KRT12Q99456 494 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 DCTN5Q9BTE1 182 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 PAPOLGQ9BWT3 736 aaKnown RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 RBM24Q9BX46 236 aaKnown RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 RAB11FIP5Q9BXF6 653 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 PUS3Q9BZE2 481 aaKnown RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 CXXC4Q9H2H0 198 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 RDH8Q9NYR8 311 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ATP6V1HQ9UI12 483 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 PLCL2Q9UPR0 1127 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ZNF175Q9Y473 711 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 ASB3Q9Y575 518 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 RIMBP3CA6NJZ7 1639 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 RIMBP3BA6NNM3 1639 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 RIMBP3Q9UFD9 1639 aa4.75□□□□□ -1.65
LINC00458-206ENST00000607494 MROH2BQ7Z745 1585 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 CCDC169A6NNP5 214 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 K7EQM0 130 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 AP3B1O00203 1094 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 SH2D1BO14796 132 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 EDIL3O43854 480 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 HPRP00739 348 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 IQCF3P0C7M6 154 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 CYP11B1P15538 503 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 RPA2P15927 270 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 SOX3P41225 446 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 MATKP42679 507 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 PTGER3P43115 390 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 NAPAP54920 295 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 UBE2HP62256 183 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 NFATC2Q13469 925 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 TRIP10Q15642 601 aa4.74□□□□□ -1.65
LINC00458-206ENST00000607494 ACSF3Q4G176 576 aaPredicted RBP4.74□□□□□ -1.65
LINC00458-206ENST00000607494 ZNF311Q5JNZ3 666 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms